RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
CLDND1-211ENST00000506575 PREX2Q70Z35 1606 aa24.85■■□□□ 1.57
CLDND1-211ENST00000506575 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
CLDND1-211ENST00000506575 ZMYM4Q5VZL5 1548 aa24.83■■□□□ 1.57
CLDND1-211ENST00000506575 POGZQ7Z3K3 1410 aa24.83■■□□□ 1.57
CLDND1-211ENST00000506575 ARHGEF40Q8TER5 1519 aa24.82■■□□□ 1.56
CLDND1-211ENST00000506575 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
CLDND1-211ENST00000506575 MAGI2Q86UL8 1455 aa24.79■■□□□ 1.56
CLDND1-211ENST00000506575 ZFYVE16Q7Z3T8 1539 aa24.79■■□□□ 1.56
CLDND1-211ENST00000506575 ARID4BQ4LE39 1312 aaPredicted RBP24.78■■□□□ 1.56
CLDND1-211ENST00000506575 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
CLDND1-211ENST00000506575 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
CLDND1-211ENST00000506575 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
CLDND1-211ENST00000506575 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
CLDND1-211ENST00000506575 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
CLDND1-211ENST00000506575 ABCC1P33527 1531 aa24.71■■□□□ 1.55
CLDND1-211ENST00000506575 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
CLDND1-211ENST00000506575 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
CLDND1-211ENST00000506575 ITSN2Q9NZM3 1697 aa24.7■■□□□ 1.54
CLDND1-211ENST00000506575 AFAP1Q8N556 730 aa24.7■■□□□ 1.54
CLDND1-211ENST00000506575 BCORL1Q5H9F3 1711 aa24.69■■□□□ 1.54
CLDND1-211ENST00000506575 KDM5CP41229 1560 aa24.69■■□□□ 1.54
CLDND1-211ENST00000506575 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
CLDND1-211ENST00000506575 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
CLDND1-211ENST00000506575 CFDP1Q9UEE9 299 aaPredicted RBP24.68■■□□□ 1.54
CLDND1-211ENST00000506575 ADAMTSL3P82987 1691 aa24.67■■□□□ 1.54
CLDND1-211ENST00000506575 SAMD9LQ8IVG5 1584 aa24.66■■□□□ 1.54
CLDND1-211ENST00000506575 HECW2Q9P2P5 1572 aa24.66■■□□□ 1.54
CLDND1-211ENST00000506575 ARHGEF12Q9NZN5 1544 aa24.66■■□□□ 1.54
CLDND1-211ENST00000506575 ATP10AO60312 1499 aa24.65■■□□□ 1.54
CLDND1-211ENST00000506575 SUPT6HQ7KZ85 1726 aaKnown RBP24.65■■□□□ 1.54
CLDND1-211ENST00000506575 TRAPPC8Q9Y2L5 1435 aa24.64■■□□□ 1.54
CLDND1-211ENST00000506575 C9orf84Q5VXU9 1444 aa24.62■■□□□ 1.53
CLDND1-211ENST00000506575 PLEKHH2Q8IVE3 1493 aa24.62■■□□□ 1.53
CLDND1-211ENST00000506575 SYCP2Q9BX26 1530 aa24.61■■□□□ 1.53
CLDND1-211ENST00000506575 MLH3Q9UHC1 1453 aa24.61■■□□□ 1.53
CLDND1-211ENST00000506575 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
CLDND1-211ENST00000506575 MADDQ8WXG6 1647 aa24.61■■□□□ 1.53
CLDND1-211ENST00000506575 NCOA2Q15596 1464 aa24.58■■□□□ 1.53
CLDND1-211ENST00000506575 HNRNPMP52272 730 aaKnown RBP eCLIP24.58■■□□□ 1.53
CLDND1-211ENST00000506575 DIP2CQ9Y2E4 1556 aa24.58■■□□□ 1.52
CLDND1-211ENST00000506575 KIAA1107Q9UPP5 1409 aa24.57■■□□□ 1.52
CLDND1-211ENST00000506575 PTPRMP28827 1452 aa24.57■■□□□ 1.52
CLDND1-211ENST00000506575 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
CLDND1-211ENST00000506575 MAP3K1Q13233 1512 aa24.56■■□□□ 1.52
CLDND1-211ENST00000506575 MLECQ14165 292 aa24.56■■□□□ 1.52
CLDND1-211ENST00000506575 ABCA6Q8N139 1617 aa24.56■■□□□ 1.52
CLDND1-211ENST00000506575 RIMS1Q86UR5 1692 aaKnown RBP24.55■■□□□ 1.52
CLDND1-211ENST00000506575 APLP2Q06481 763 aa24.54■■□□□ 1.52
CLDND1-211ENST00000506575 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
CLDND1-211ENST00000506575 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
CLDND1-211ENST00000506575 REREQ9P2R6 1566 aa24.51■■□□□ 1.51
CLDND1-211ENST00000506575 ZNF644Q9H582 1327 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-211ENST00000506575 FER1L4A9Z1Z3 1794 aa24.51■■□□□ 1.51
CLDND1-211ENST00000506575 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
CLDND1-211ENST00000506575 ATP7AQ04656 1500 aa24.47■■□□□ 1.51
CLDND1-211ENST00000506575 INO80Q9ULG1 1556 aaPredicted RBP24.45■■□□□ 1.5
CLDND1-211ENST00000506575 CAMSAP2Q08AD1 1489 aa24.45■■□□□ 1.5
CLDND1-211ENST00000506575 AGLP35573 1532 aa24.43■■□□□ 1.5
CLDND1-211ENST00000506575 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
CLDND1-211ENST00000506575 PLPPR3Q6T4P5 718 aa24.42■■□□□ 1.5
CLDND1-211ENST00000506575 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
CLDND1-211ENST00000506575 RSPH4AQ5TD94 716 aa24.38■■□□□ 1.49
CLDND1-211ENST00000506575 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
CLDND1-211ENST00000506575 ESF1Q9H501 851 aaKnown RBP24.37■■□□□ 1.49
CLDND1-211ENST00000506575 ADGBQ8N7X0 1667 aa24.37■■□□□ 1.49
CLDND1-211ENST00000506575 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
CLDND1-211ENST00000506575 A2MP01023 1474 aa24.35■■□□□ 1.49
CLDND1-211ENST00000506575 ARHGEF5Q12774 1597 aa24.34■■□□□ 1.49
CLDND1-211ENST00000506575 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
CLDND1-211ENST00000506575 PLXNC1O60486 1568 aa24.33■■□□□ 1.48
CLDND1-211ENST00000506575 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
CLDND1-211ENST00000506575 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
CLDND1-211ENST00000506575 CEBPAP49715 358 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-211ENST00000506575 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.48
CLDND1-211ENST00000506575 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
CLDND1-211ENST00000506575 C3P01024 1663 aa24.24■■□□□ 1.47
CLDND1-211ENST00000506575 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
CLDND1-211ENST00000506575 GGT6Q6P531 493 aa24.23■■□□□ 1.47
CLDND1-211ENST00000506575 PTPN23Q9H3S7 1636 aa24.23■■□□□ 1.47
CLDND1-211ENST00000506575 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
CLDND1-211ENST00000506575 MAST1Q9Y2H9 1570 aa24.21■■□□□ 1.47
CLDND1-211ENST00000506575 MROH2AA6NES4 1674 aa24.21■■□□□ 1.47
CLDND1-211ENST00000506575 SETD1BQ9UPS6 1966 aaKnown RBP24.2■■□□□ 1.46
CLDND1-211ENST00000506575 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
CLDND1-211ENST00000506575 CLTCQ00610 1675 aaKnown RBP24.19■■□□□ 1.46
CLDND1-211ENST00000506575 PPP6R1Q9UPN7 881 aa24.17■■□□□ 1.46
CLDND1-211ENST00000506575 KIF3BO15066 747 aa24.16■■□□□ 1.46
CLDND1-211ENST00000506575 HSPA2P54652 639 aa24.15■■□□□ 1.46
CLDND1-211ENST00000506575 ZMYM3Q14202 1370 aa24.15■■□□□ 1.46
CLDND1-211ENST00000506575 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
CLDND1-211ENST00000506575 UHRF1BP1Q6BDS2 1440 aa24.14■■□□□ 1.45
CLDND1-211ENST00000506575 CROCC2H7BZ55 1655 aa24.14■■□□□ 1.45
CLDND1-211ENST00000506575 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
CLDND1-211ENST00000506575 SHANK2Q9UPX8 1470 aa24.11■■□□□ 1.45
CLDND1-211ENST00000506575 ABCC5O15440 1437 aa24.1■■□□□ 1.45
CLDND1-211ENST00000506575 DAPK1P53355 1430 aa24.1■■□□□ 1.45
CLDND1-211ENST00000506575 NPATQ14207 1427 aa24.09■■□□□ 1.45
CLDND1-211ENST00000506575 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
CLDND1-211ENST00000506575 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms