RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
CCND3-208ENST00000505672 LMTK3Q96Q04 1460 aa29.49■■■□□ 2.31
CCND3-208ENST00000505672 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
CCND3-208ENST00000505672 CDK11AQ9UQ88 783 aaPredicted RBP29.47■■■□□ 2.31
CCND3-208ENST00000505672 KIF14Q15058 1648 aa29.46■■■□□ 2.31
CCND3-208ENST00000505672 EFCAB2Q5VUJ9 269 aa29.46■■■□□ 2.31
CCND3-208ENST00000505672 LRRIQ1Q96JM4 1722 aa29.43■■■□□ 2.3
CCND3-208ENST00000505672 TROQ12816 1431 aaPredicted RBP29.43■■■□□ 2.3
CCND3-208ENST00000505672 MYO5CQ9NQX4 1742 aa29.42■■■□□ 2.3
CCND3-208ENST00000505672 MLECQ14165 292 aa29.42■■■□□ 2.3
CCND3-208ENST00000505672 PLPPR3Q6T4P5 718 aa29.4■■■□□ 2.3
CCND3-208ENST00000505672 ATP10AO60312 1499 aa29.38■■■□□ 2.29
CCND3-208ENST00000505672 HSPA2P54652 639 aa29.36■■■□□ 2.29
CCND3-208ENST00000505672 AFAP1Q8N556 730 aa29.36■■■□□ 2.29
CCND3-208ENST00000505672 FBXO41Q8TF61 875 aa29.34■■■□□ 2.29
CCND3-208ENST00000505672 ARHGAP5Q13017 1502 aa29.32■■■□□ 2.28
CCND3-208ENST00000505672 C9orf84Q5VXU9 1444 aa29.32■■■□□ 2.28
CCND3-208ENST00000505672 CLIP1P30622 1438 aa29.31■■■□□ 2.28
CCND3-208ENST00000505672 FER1L4A9Z1Z3 1794 aa29.31■■■□□ 2.28
CCND3-208ENST00000505672 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
CCND3-208ENST00000505672 ZNF518AQ6AHZ1 1483 aa29.29■■■□□ 2.28
CCND3-208ENST00000505672 CASKIN1Q8WXD9 1431 aa29.29■■■□□ 2.28
CCND3-208ENST00000505672 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
CCND3-208ENST00000505672 KDM5CP41229 1560 aa29.28■■■□□ 2.28
CCND3-208ENST00000505672 CEBPAP49715 358 aaPredicted RBP29.23■■■□□ 2.27
CCND3-208ENST00000505672 CCDC18Q5T9S5 1454 aa29.21■■■□□ 2.27
CCND3-208ENST00000505672 DIP2CQ9Y2E4 1556 aa29.2■■■□□ 2.26
CCND3-208ENST00000505672 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
CCND3-208ENST00000505672 PREX2Q70Z35 1606 aa29.19■■■□□ 2.26
CCND3-208ENST00000505672 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
CCND3-208ENST00000505672 MYT1LQ9UL68 1186 aa29.17■■■□□ 2.26
CCND3-208ENST00000505672 ABCC1P33527 1531 aa29.15■■■□□ 2.26
CCND3-208ENST00000505672 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
CCND3-208ENST00000505672 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
CCND3-208ENST00000505672 CDC42BPAQ5VT25 1732 aa29.11■■■□□ 2.25
CCND3-208ENST00000505672 FYCO1Q9BQS8 1478 aa29.11■■■□□ 2.25
CCND3-208ENST00000505672 ITSN2Q9NZM3 1697 aa29.11■■■□□ 2.25
CCND3-208ENST00000505672 PREX1Q8TCU6 1659 aa29.09■■■□□ 2.25
CCND3-208ENST00000505672 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
CCND3-208ENST00000505672 AGLP35573 1532 aa29.06■■■□□ 2.24
CCND3-208ENST00000505672 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
CCND3-208ENST00000505672 ZNF777Q9ULD5 760 aaPredicted RBP29.03■■■□□ 2.24
CCND3-208ENST00000505672 CERKQ8TCT0 537 aa29.02■■■□□ 2.24
CCND3-208ENST00000505672 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.24
CCND3-208ENST00000505672 SETD1BQ9UPS6 1966 aaKnown RBP29.01■■■□□ 2.23
CCND3-208ENST00000505672 C3P01024 1663 aa28.99■■■□□ 2.23
CCND3-208ENST00000505672 STRCQ7RTU9 1775 aa28.99■■■□□ 2.23
CCND3-208ENST00000505672 HNRNPMP52272 730 aaKnown RBP eCLIP28.99■■■□□ 2.23
CCND3-208ENST00000505672 UHRF1BP1Q6BDS2 1440 aa28.98■■■□□ 2.23
CCND3-208ENST00000505672 CEP162Q5TB80 1403 aa28.95■■■□□ 2.23
CCND3-208ENST00000505672 SYCP2Q9BX26 1530 aa28.95■■■□□ 2.23
CCND3-208ENST00000505672 ESF1Q9H501 851 aaKnown RBP28.92■■■□□ 2.22
CCND3-208ENST00000505672 SPAG9O60271 1321 aaKnown RBP28.92■■■□□ 2.22
CCND3-208ENST00000505672 CFDP1Q9UEE9 299 aaPredicted RBP28.91■■■□□ 2.22
CCND3-208ENST00000505672 KIAA1107Q9UPP5 1409 aa28.9■■■□□ 2.22
CCND3-208ENST00000505672 DMRT2Q9Y5R5 561 aa28.9■■■□□ 2.22
CCND3-208ENST00000505672 CCNB3Q8WWL7 1395 aa28.88■■■□□ 2.21
CCND3-208ENST00000505672 CNTLNQ9NXG0 1405 aa28.87■■■□□ 2.21
CCND3-208ENST00000505672 MTUS2Q5JR59 1369 aa28.85■■■□□ 2.21
CCND3-208ENST00000505672 ATP7AQ04656 1500 aa28.84■■■□□ 2.21
CCND3-208ENST00000505672 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
CCND3-208ENST00000505672 ZNF644Q9H582 1327 aaPredicted RBP28.83■■■□□ 2.21
CCND3-208ENST00000505672 PLEKHH2Q8IVE3 1493 aa28.83■■■□□ 2.21
CCND3-208ENST00000505672 ZMYM3Q14202 1370 aa28.82■■■□□ 2.2
CCND3-208ENST00000505672 INO80Q9ULG1 1556 aaPredicted RBP28.82■■■□□ 2.2
CCND3-208ENST00000505672 PLXNC1O60486 1568 aa28.8■■■□□ 2.2
CCND3-208ENST00000505672 PTPRTO14522 1441 aa28.8■■■□□ 2.2
CCND3-208ENST00000505672 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
CCND3-208ENST00000505672 A2MP01023 1474 aa28.78■■■□□ 2.2
CCND3-208ENST00000505672 MROH2AA6NES4 1674 aa28.78■■■□□ 2.2
CCND3-208ENST00000505672 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
CCND3-208ENST00000505672 MBD5Q9P267 1494 aa28.77■■■□□ 2.2
CCND3-208ENST00000505672 NPATQ14207 1427 aa28.77■■■□□ 2.2
CCND3-208ENST00000505672 NCOA1Q15788 1441 aa28.75■■■□□ 2.19
CCND3-208ENST00000505672 GGT6Q6P531 493 aa28.73■■■□□ 2.19
CCND3-208ENST00000505672 EHBP1L1Q8N3D4 1523 aa28.73■■■□□ 2.19
CCND3-208ENST00000505672 CLTCQ00610 1675 aaKnown RBP28.72■■■□□ 2.19
CCND3-208ENST00000505672 CAMSAP1Q5T5Y3 1602 aa28.69■■■□□ 2.18
CCND3-208ENST00000505672 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
CCND3-208ENST00000505672 PTPRKQ15262 1439 aa28.68■■■□□ 2.18
CCND3-208ENST00000505672 ADGBQ8N7X0 1667 aa28.66■■■□□ 2.18
CCND3-208ENST00000505672 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
CCND3-208ENST00000505672 NCKAP5LQ9HCH0 1330 aa28.65■■■□□ 2.18
CCND3-208ENST00000505672 PPP6R1Q9UPN7 881 aa28.64■■■□□ 2.18
CCND3-208ENST00000505672 VPS8Q8N3P4 1428 aa28.62■■■□□ 2.17
CCND3-208ENST00000505672 DHX29Q7Z478 1369 aaKnown RBP28.62■■■□□ 2.17
CCND3-208ENST00000505672 NCOA2Q15596 1464 aa28.6■■■□□ 2.17
CCND3-208ENST00000505672 MYO3AQ8NEV4 1616 aa28.6■■■□□ 2.17
CCND3-208ENST00000505672 ZNF142P52746 1687 aaPredicted RBP28.58■■■□□ 2.16
CCND3-208ENST00000505672 CEP170BQ9Y4F5 1589 aaPredicted RBP28.56■■■□□ 2.16
CCND3-208ENST00000505672 CAMSAP2Q08AD1 1489 aa28.55■■■□□ 2.16
CCND3-208ENST00000505672 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
CCND3-208ENST00000505672 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
CCND3-208ENST00000505672 KIF3BO15066 747 aa28.53■■■□□ 2.16
CCND3-208ENST00000505672 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
CCND3-208ENST00000505672 ZNF335Q9H4Z2 1342 aaPredicted RBP28.52■■■□□ 2.16
CCND3-208ENST00000505672 PKD2Q13563 968 aa28.52■■■□□ 2.16
CCND3-208ENST00000505672 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
CCND3-208ENST00000505672 IQSEC2Q5JU85 1478 aa28.51■■■□□ 2.15
CCND3-208ENST00000505672 FBXO31Q5XUX0 539 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms