RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 NISCHQ9Y2I1 1504 aa45.02■■■■■ 4.8
CCND3-208ENST00000505672 ABCC9O60706 1549 aa40.54■■■■■ 4.08
CCND3-208ENST00000505672 CCDC180Q9P1Z9 1646 aa40.34■■■■■ 4.05
CCND3-208ENST00000505672 RB1CC1Q8TDY2 1594 aa38.47■■■■□ 3.75
CCND3-208ENST00000505672 DNAJC5BQ9UF47 199 aa38.26■■■■□ 3.72
CCND3-208ENST00000505672 NACADO15069 1562 aa38.2■■■■□ 3.71
CCND3-208ENST00000505672 DCAF8L2P0C7V8 631 aa38.06■■■■□ 3.68
CCND3-208ENST00000505672 PABPN1Q86U42 306 aaKnown RBP eCLIP37.79■■■■□ 3.64
CCND3-208ENST00000505672 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
CCND3-208ENST00000505672 UNC13AQ9UPW8 1703 aa37.65■■■■□ 3.62
CCND3-208ENST00000505672 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
CCND3-208ENST00000505672 ZCCHC6Q5VYS8 1495 aaKnown RBP37.27■■■■□ 3.56
CCND3-208ENST00000505672 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
CCND3-208ENST00000505672 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.48
CCND3-208ENST00000505672 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
CCND3-208ENST00000505672 CC2D2AQ9P2K1 1620 aa36.6■■■■□ 3.45
CCND3-208ENST00000505672 CECR2Q9BXF3 1484 aa36.51■■■■□ 3.44
CCND3-208ENST00000505672 EIF4G1Q04637 1599 aaKnown RBP36.5■■■■□ 3.43
CCND3-208ENST00000505672 NCAPD3P42695 1498 aa35.34■■■■□ 3.25
CCND3-208ENST00000505672 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
CCND3-208ENST00000505672 DNAJC5Q9H3Z4 198 aa35.12■■■■□ 3.21
CCND3-208ENST00000505672 SMARCA4P51532 1647 aa35.11■■■■□ 3.21
CCND3-208ENST00000505672 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
CCND3-208ENST00000505672 HMGXB3Q12766 1538 aa35■■■■□ 3.19
CCND3-208ENST00000505672 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
CCND3-208ENST00000505672 CUX2O14529 1486 aa34.92■■■■□ 3.18
CCND3-208ENST00000505672 BAZ1AQ9NRL2 1556 aaPredicted RBP34.9■■■■□ 3.18
CCND3-208ENST00000505672 NESP48681 1621 aa34.84■■■■□ 3.17
CCND3-208ENST00000505672 BAZ1BQ9UIG0 1483 aaKnown RBP34.81■■■■□ 3.16
CCND3-208ENST00000505672 PEG3Q9GZU2 1588 aa34.79■■■■□ 3.16
CCND3-208ENST00000505672 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
CCND3-208ENST00000505672 LAMC3Q9Y6N6 1575 aa34.49■■■■□ 3.11
CCND3-208ENST00000505672 THOC2Q8NI27 1593 aaKnown RBP34.44■■■■□ 3.1
CCND3-208ENST00000505672 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
CCND3-208ENST00000505672 PDS5BQ9NTI5 1447 aa34.3■■■■□ 3.08
CCND3-208ENST00000505672 WIZO95785 1651 aa34.28■■■■□ 3.08
CCND3-208ENST00000505672 CADPSQ9ULU8 1353 aa34.25■■■■□ 3.07
CCND3-208ENST00000505672 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.04
CCND3-208ENST00000505672 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
CCND3-208ENST00000505672 WDR62O43379 1518 aa33.94■■■■□ 3.02
CCND3-208ENST00000505672 CFTRP13569 1480 aa33.84■■■■□ 3.01
CCND3-208ENST00000505672 CEP164Q9UPV0 1460 aa33.84■■■■□ 3.01
CCND3-208ENST00000505672 FANCD2Q9BXW9 1451 aa33.83■■■■□ 3.01
CCND3-208ENST00000505672 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
CCND3-208ENST00000505672 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
CCND3-208ENST00000505672 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
CCND3-208ENST00000505672 CCDC88BA6NC98 1476 aa33.48■■■□□ 2.95
CCND3-208ENST00000505672 PRDM2Q13029 1718 aa33.39■■■□□ 2.94
CCND3-208ENST00000505672 OSCARQ8IYS5 282 aa33.37■■■□□ 2.93
CCND3-208ENST00000505672 ZNF608Q9ULD9 1512 aaPredicted RBP33.22■■■□□ 2.91
CCND3-208ENST00000505672 TOPBP1Q92547 1522 aa33.19■■■□□ 2.9
CCND3-208ENST00000505672 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
CCND3-208ENST00000505672 ABCC8Q09428 1581 aa33.05■■■□□ 2.88
CCND3-208ENST00000505672 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
CCND3-208ENST00000505672 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.86
CCND3-208ENST00000505672 RIMBP3CA6NJZ7 1639 aa32.92■■■□□ 2.86
CCND3-208ENST00000505672 RIMBP3BA6NNM3 1639 aa32.92■■■□□ 2.86
CCND3-208ENST00000505672 TARBP1Q13395 1621 aaKnown RBP32.92■■■□□ 2.86
CCND3-208ENST00000505672 RIMBP3Q9UFD9 1639 aa32.92■■■□□ 2.86
CCND3-208ENST00000505672 AQRO60306 1485 aaKnown RBP eCLIP32.91■■■□□ 2.867e-7■■■■■ 36
CCND3-208ENST00000505672 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
CCND3-208ENST00000505672 ARHGEF11O15085 1522 aa32.81■■■□□ 2.84
CCND3-208ENST00000505672 RAD54L2Q9Y4B4 1467 aa32.77■■■□□ 2.84
CCND3-208ENST00000505672 CHD1O14646 1710 aa32.72■■■□□ 2.83
CCND3-208ENST00000505672 SOGA1O94964 1423 aa32.7■■■□□ 2.83
CCND3-208ENST00000505672 TDRD9Q8NDG6 1382 aaKnown RBP32.69■■■□□ 2.82
CCND3-208ENST00000505672 FBLN2P98095 1184 aa32.66■■■□□ 2.82
CCND3-208ENST00000505672 FGD5Q6ZNL6 1462 aa32.62■■■□□ 2.81
CCND3-208ENST00000505672 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
CCND3-208ENST00000505672 CUX1P39880 1505 aa32.61■■■□□ 2.81
CCND3-208ENST00000505672 SNAPC4Q5SXM2 1469 aa32.51■■■□□ 2.79
CCND3-208ENST00000505672 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
CCND3-208ENST00000505672 WDR97A6NE52 1622 aa32.48■■■□□ 2.79
CCND3-208ENST00000505672 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
CCND3-208ENST00000505672 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
CCND3-208ENST00000505672 GRIN2BQ13224 1484 aa32.4■■■□□ 2.78
CCND3-208ENST00000505672 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
CCND3-208ENST00000505672 CLASP1Q7Z460 1538 aa32.38■■■□□ 2.77
CCND3-208ENST00000505672 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
CCND3-208ENST00000505672 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
CCND3-208ENST00000505672 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
CCND3-208ENST00000505672 ABCA10Q8WWZ4 1543 aa32.25■■■□□ 2.75
CCND3-208ENST00000505672 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
CCND3-208ENST00000505672 TRHP20396 242 aaPredicted RBP32.23■■■□□ 2.75
CCND3-208ENST00000505672 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
CCND3-208ENST00000505672 WRNQ14191 1432 aaPredicted RBP eCLIP32.08■■■□□ 2.739e-6■■■■■ 50.1
CCND3-208ENST00000505672 TOP2BQ02880 1626 aa32.02■■■□□ 2.72
CCND3-208ENST00000505672 BIVM-ERCC5R4GMW8 1640 aa32.01■■■□□ 2.72
CCND3-208ENST00000505672 GRIN2AQ12879 1464 aa31.99■■■□□ 2.71
CCND3-208ENST00000505672 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
CCND3-208ENST00000505672 ERCC6L2Q5T890 1561 aa31.93■■■□□ 2.7
CCND3-208ENST00000505672 NUP160Q12769 1436 aa31.92■■■□□ 2.7
CCND3-208ENST00000505672 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
CCND3-208ENST00000505672 FHAD1B1AJZ9 1412 aa31.87■■■□□ 2.69
CCND3-208ENST00000505672 ERICH3Q5RHP9 1530 aa31.81■■■□□ 2.68
CCND3-208ENST00000505672 SHROOM2Q13796 1616 aa31.76■■■□□ 2.67
CCND3-208ENST00000505672 JPH4Q96JJ6 628 aa31.62■■■□□ 2.65
CCND3-208ENST00000505672 PRG4Q92954 1404 aaPredicted RBP31.61■■■□□ 2.65
CCND3-208ENST00000505672 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
CCND3-208ENST00000505672 IGF1RP08069 1367 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms