RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
CTSB-205ENST00000505496 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
CTSB-205ENST00000505496 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
CTSB-205ENST00000505496 LRRC9Q6ZRR7 1453 aa13.79□□□□□ -0.2
CTSB-205ENST00000505496 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
CTSB-205ENST00000505496 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
CTSB-205ENST00000505496 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
CTSB-205ENST00000505496 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.21
CTSB-205ENST00000505496 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
CTSB-205ENST00000505496 RICTORQ6R327 1708 aa13.76□□□□□ -0.21
CTSB-205ENST00000505496 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
CTSB-205ENST00000505496 KANK4Q5T7N3 995 aaPredicted RBP13.75□□□□□ -0.21
CTSB-205ENST00000505496 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
CTSB-205ENST00000505496 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
CTSB-205ENST00000505496 CFDP1Q9UEE9 299 aaPredicted RBP13.74□□□□□ -0.21
CTSB-205ENST00000505496 ABCC1P33527 1531 aa13.74□□□□□ -0.21
CTSB-205ENST00000505496 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
CTSB-205ENST00000505496 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
CTSB-205ENST00000505496 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
CTSB-205ENST00000505496 KDM5CP41229 1560 aa13.72□□□□□ -0.21
CTSB-205ENST00000505496 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
CTSB-205ENST00000505496 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
CTSB-205ENST00000505496 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
CTSB-205ENST00000505496 TRAPPC8Q9Y2L5 1435 aa13.71□□□□□ -0.22
CTSB-205ENST00000505496 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
CTSB-205ENST00000505496 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
CTSB-205ENST00000505496 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
CTSB-205ENST00000505496 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
CTSB-205ENST00000505496 MLH3Q9UHC1 1453 aa13.69□□□□□ -0.22
CTSB-205ENST00000505496 APLP2Q06481 763 aa13.69□□□□□ -0.22
CTSB-205ENST00000505496 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
CTSB-205ENST00000505496 ZFYVE16Q7Z3T8 1539 aa13.68□□□□□ -0.22
CTSB-205ENST00000505496 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
CTSB-205ENST00000505496 ZNF644Q9H582 1327 aaPredicted RBP13.67□□□□□ -0.22
CTSB-205ENST00000505496 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
CTSB-205ENST00000505496 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
CTSB-205ENST00000505496 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTSB-205ENST00000505496 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
CTSB-205ENST00000505496 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
CTSB-205ENST00000505496 ATP10AO60312 1499 aa13.65□□□□□ -0.22
CTSB-205ENST00000505496 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
CTSB-205ENST00000505496 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
CTSB-205ENST00000505496 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
CTSB-205ENST00000505496 RSPH4AQ5TD94 716 aa13.62□□□□□ -0.23
CTSB-205ENST00000505496 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
CTSB-205ENST00000505496 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
CTSB-205ENST00000505496 DIP2CQ9Y2E4 1556 aa13.61□□□□□ -0.23
CTSB-205ENST00000505496 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
CTSB-205ENST00000505496 KIDINS220Q9ULH0 1771 aa13.59□□□□□ -0.23
CTSB-205ENST00000505496 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
CTSB-205ENST00000505496 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
CTSB-205ENST00000505496 ARHGEF5Q12774 1597 aa13.58□□□□□ -0.23
CTSB-205ENST00000505496 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
CTSB-205ENST00000505496 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
CTSB-205ENST00000505496 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
CTSB-205ENST00000505496 INO80Q9ULG1 1556 aaPredicted RBP13.58□□□□□ -0.24
CTSB-205ENST00000505496 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
CTSB-205ENST00000505496 ADAMTSL3P82987 1691 aa13.57□□□□□ -0.24
CTSB-205ENST00000505496 AGLP35573 1532 aa13.57□□□□□ -0.24
CTSB-205ENST00000505496 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
CTSB-205ENST00000505496 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
CTSB-205ENST00000505496 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
CTSB-205ENST00000505496 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
CTSB-205ENST00000505496 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
CTSB-205ENST00000505496 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
CTSB-205ENST00000505496 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
CTSB-205ENST00000505496 A2MP01023 1474 aa13.52□□□□□ -0.25
CTSB-205ENST00000505496 PTPRMP28827 1452 aa13.52□□□□□ -0.25
CTSB-205ENST00000505496 PTPN23Q9H3S7 1636 aa13.52□□□□□ -0.25
CTSB-205ENST00000505496 MAST1Q9Y2H9 1570 aa13.51□□□□□ -0.25
CTSB-205ENST00000505496 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
CTSB-205ENST00000505496 SHANK2Q9UPX8 1470 aa13.5□□□□□ -0.25
CTSB-205ENST00000505496 ABCC5O15440 1437 aa13.5□□□□□ -0.25
CTSB-205ENST00000505496 MADDQ8WXG6 1647 aa13.5□□□□□ -0.25
CTSB-205ENST00000505496 MLECQ14165 292 aa13.49□□□□□ -0.25
CTSB-205ENST00000505496 DAPK1P53355 1430 aa13.47□□□□□ -0.25
CTSB-205ENST00000505496 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
CTSB-205ENST00000505496 PPP6R1Q9UPN7 881 aa13.46□□□□□ -0.25
CTSB-205ENST00000505496 DNMT1P26358 1616 aaKnown RBP13.46□□□□□ -0.26
CTSB-205ENST00000505496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■■□□□ 11.9
CTSB-205ENST00000505496 CNTLNQ9NXG0 1405 aa13.44□□□□□ -0.26
CTSB-205ENST00000505496 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
CTSB-205ENST00000505496 FAM50AQ14320 339 aaKnown RBP13.42□□□□□ -0.26
CTSB-205ENST00000505496 CROCC2H7BZ55 1655 aa13.42□□□□□ -0.26
CTSB-205ENST00000505496 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
CTSB-205ENST00000505496 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
CTSB-205ENST00000505496 NCOA1Q15788 1441 aa13.41□□□□□ -0.26
CTSB-205ENST00000505496 RRBP1Q9P2E9 1410 aaKnown RBP13.41□□□□□ -0.26
CTSB-205ENST00000505496 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
CTSB-205ENST00000505496 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
CTSB-205ENST00000505496 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
CTSB-205ENST00000505496 KIF3BO15066 747 aa13.4□□□□□ -0.26
CTSB-205ENST00000505496 GGT6Q6P531 493 aa13.4□□□□□ -0.26
CTSB-205ENST00000505496 ANKRD30AQ9BXX3 1397 aa13.4□□□□□ -0.26
CTSB-205ENST00000505496 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
CTSB-205ENST00000505496 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
CTSB-205ENST00000505496 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
CTSB-205ENST00000505496 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
CTSB-205ENST00000505496 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
CTSB-205ENST00000505496 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms