RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
DDX41-204ENST00000504807 TTC37Q6PGP7 1564 aa21.76■■□□□ 1.07
DDX41-204ENST00000504807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
DDX41-204ENST00000504807 ZFYVE16Q7Z3T8 1539 aa21.75■■□□□ 1.07
DDX41-204ENST00000504807 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
DDX41-204ENST00000504807 FER1L4A9Z1Z3 1794 aa21.74■■□□□ 1.07
DDX41-204ENST00000504807 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
DDX41-204ENST00000504807 STRCQ7RTU9 1775 aa21.72■■□□□ 1.07
DDX41-204ENST00000504807 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
DDX41-204ENST00000504807 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
DDX41-204ENST00000504807 ZMYM4Q5VZL5 1548 aa21.69■■□□□ 1.06
DDX41-204ENST00000504807 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
DDX41-204ENST00000504807 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
DDX41-204ENST00000504807 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
DDX41-204ENST00000504807 ARHGEF12Q9NZN5 1544 aa21.65■■□□□ 1.06
DDX41-204ENST00000504807 PTPRTO14522 1441 aa21.65■■□□□ 1.06
DDX41-204ENST00000504807 MAGI2Q86UL8 1455 aa21.64■■□□□ 1.06
DDX41-204ENST00000504807 KIF14Q15058 1648 aa21.64■■□□□ 1.05
DDX41-204ENST00000504807 LTBP4Q8N2S1 1624 aa21.64■■□□□ 1.05
DDX41-204ENST00000504807 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
DDX41-204ENST00000504807 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
DDX41-204ENST00000504807 IQSEC2Q5JU85 1478 aa21.59■■□□□ 1.05
DDX41-204ENST00000504807 UBAP1LF5GYI3 381 aa21.58■■□□□ 1.05
DDX41-204ENST00000504807 ATP10AO60312 1499 aa21.58■■□□□ 1.04
DDX41-204ENST00000504807 PLCH2O75038 1416 aa21.56■■□□□ 1.04
DDX41-204ENST00000504807 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
DDX41-204ENST00000504807 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
DDX41-204ENST00000504807 TROQ12816 1431 aaPredicted RBP21.54■■□□□ 1.04
DDX41-204ENST00000504807 CASKIN1Q8WXD9 1431 aa21.54■■□□□ 1.04
DDX41-204ENST00000504807 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
DDX41-204ENST00000504807 CLIP1P30622 1438 aa21.49■■□□□ 1.03
DDX41-204ENST00000504807 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
DDX41-204ENST00000504807 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
DDX41-204ENST00000504807 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
DDX41-204ENST00000504807 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
DDX41-204ENST00000504807 SETD1BQ9UPS6 1966 aaKnown RBP21.44■■□□□ 1.02
DDX41-204ENST00000504807 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
DDX41-204ENST00000504807 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
DDX41-204ENST00000504807 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
DDX41-204ENST00000504807 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
DDX41-204ENST00000504807 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
DDX41-204ENST00000504807 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
DDX41-204ENST00000504807 TRAPPC8Q9Y2L5 1435 aa21.42■■□□□ 1.02
DDX41-204ENST00000504807 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
DDX41-204ENST00000504807 HSPA1LP34931 641 aa21.41■■□□□ 1.02
DDX41-204ENST00000504807 NCKAP5LQ9HCH0 1330 aa21.4■■□□□ 1.02
DDX41-204ENST00000504807 PREX2Q70Z35 1606 aa21.4■■□□□ 1.02
DDX41-204ENST00000504807 EFCAB2Q5VUJ9 269 aa21.39■■□□□ 1.01
DDX41-204ENST00000504807 C3P01024 1663 aa21.39■■□□□ 1.01
DDX41-204ENST00000504807 AFAP1Q8N556 730 aa21.38■■□□□ 1.01
DDX41-204ENST00000504807 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
DDX41-204ENST00000504807 CAMSAP1Q5T5Y3 1602 aa21.37■■□□□ 1.01
DDX41-204ENST00000504807 KDM5CP41229 1560 aa21.36■■□□□ 1.01
DDX41-204ENST00000504807 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
DDX41-204ENST00000504807 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
DDX41-204ENST00000504807 ABCC1P33527 1531 aa21.34■■□□□ 1.01
DDX41-204ENST00000504807 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
DDX41-204ENST00000504807 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
DDX41-204ENST00000504807 DIP2CQ9Y2E4 1556 aa21.3■■□□□ 1
DDX41-204ENST00000504807 ITSN2Q9NZM3 1697 aa21.3■■□□□ 1
DDX41-204ENST00000504807 ABCA6Q8N139 1617 aa21.29■■□□□ 1
DDX41-204ENST00000504807 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
DDX41-204ENST00000504807 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
DDX41-204ENST00000504807 LOC105371045A0A1W2PR82 267 aa21.27■■□□□ 1
DDX41-204ENST00000504807 REREQ9P2R6 1566 aa21.24■□□□□ 0.99
DDX41-204ENST00000504807 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
DDX41-204ENST00000504807 PKD2Q13563 968 aa21.24■□□□□ 0.99
DDX41-204ENST00000504807 TOM1O60784 492 aa21.23■□□□□ 0.99
DDX41-204ENST00000504807 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
DDX41-204ENST00000504807 AGLP35573 1532 aa21.23■□□□□ 0.99
DDX41-204ENST00000504807 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
DDX41-204ENST00000504807 SYCP2Q9BX26 1530 aa21.22■□□□□ 0.99
DDX41-204ENST00000504807 KIDINS220Q9ULH0 1771 aa21.22■□□□□ 0.99
DDX41-204ENST00000504807 NPATQ14207 1427 aa21.21■□□□□ 0.99
DDX41-204ENST00000504807 TIAM1Q13009 1591 aa21.2■□□□□ 0.98
DDX41-204ENST00000504807 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
DDX41-204ENST00000504807 ZNF777Q9ULD5 760 aaPredicted RBP21.18■□□□□ 0.98
DDX41-204ENST00000504807 ZMYM3Q14202 1370 aa21.18■□□□□ 0.98
DDX41-204ENST00000504807 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
DDX41-204ENST00000504807 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
DDX41-204ENST00000504807 TCOF1Q13428 1488 aaKnown RBP21.17■□□□□ 0.98
DDX41-204ENST00000504807 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
DDX41-204ENST00000504807 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
DDX41-204ENST00000504807 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
DDX41-204ENST00000504807 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
DDX41-204ENST00000504807 INO80Q9ULG1 1556 aaPredicted RBP21.11■□□□□ 0.97
DDX41-204ENST00000504807 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
DDX41-204ENST00000504807 KIAA1107Q9UPP5 1409 aa21.1■□□□□ 0.97
DDX41-204ENST00000504807 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
DDX41-204ENST00000504807 MYO3AQ8NEV4 1616 aa21.09■□□□□ 0.97
DDX41-204ENST00000504807 MBD5Q9P267 1494 aa21.08■□□□□ 0.97
DDX41-204ENST00000504807 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
DDX41-204ENST00000504807 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
DDX41-204ENST00000504807 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
DDX41-204ENST00000504807 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
DDX41-204ENST00000504807 ZNF142P52746 1687 aaPredicted RBP21.06■□□□□ 0.96
DDX41-204ENST00000504807 CPS1P31327 1500 aa21.06■□□□□ 0.96
DDX41-204ENST00000504807 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
DDX41-204ENST00000504807 RGS17Q9UGC6 210 aaPredicted RBP21.05■□□□□ 0.96
DDX41-204ENST00000504807 PLXNC1O60486 1568 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms