RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
GYPA-204ENST00000504786 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
GYPA-204ENST00000504786 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
GYPA-204ENST00000504786 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
GYPA-204ENST00000504786 ZNF710Q8N1W2 664 aa11.01□□□□□ -0.65
GYPA-204ENST00000504786 BBXQ8WY36 941 aaPredicted RBP11.01□□□□□ -0.65
GYPA-204ENST00000504786 KIF3CO14782 793 aa10.99□□□□□ -0.65
GYPA-204ENST00000504786 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
GYPA-204ENST00000504786 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
GYPA-204ENST00000504786 EMP3P54852 163 aa10.93□□□□□ -0.66
GYPA-204ENST00000504786 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
GYPA-204ENST00000504786 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
GYPA-204ENST00000504786 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
GYPA-204ENST00000504786 GPHNQ9NQX3 736 aaPredicted RBP10.92□□□□□ -0.66
GYPA-204ENST00000504786 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
GYPA-204ENST00000504786 FOXK1P85037 733 aa10.89□□□□□ -0.67
GYPA-204ENST00000504786 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
GYPA-204ENST00000504786 PDE4AP27815 886 aa10.87□□□□□ -0.67
GYPA-204ENST00000504786 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
GYPA-204ENST00000504786 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
GYPA-204ENST00000504786 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
GYPA-204ENST00000504786 ARSIQ5FYB1 569 aa10.86□□□□□ -0.67
GYPA-204ENST00000504786 CDAN1Q8IWY9 1227 aa10.86□□□□□ -0.67
GYPA-204ENST00000504786 CRISPLD2Q9H0B8 497 aa10.86□□□□□ -0.67
GYPA-204ENST00000504786 SLC34A2O95436 690 aa10.85□□□□□ -0.67
GYPA-204ENST00000504786 DSG2Q14126 1118 aa10.85□□□□□ -0.67
GYPA-204ENST00000504786 ERBB3P21860 1342 aa10.83□□□□□ -0.68
GYPA-204ENST00000504786 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
GYPA-204ENST00000504786 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
GYPA-204ENST00000504786 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
GYPA-204ENST00000504786 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
GYPA-204ENST00000504786 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
GYPA-204ENST00000504786 PPP1R15BQ5SWA1 713 aa10.8□□□□□ -0.68
GYPA-204ENST00000504786 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.681e-7■□□□□ 8.2
GYPA-204ENST00000504786 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
GYPA-204ENST00000504786 POTEB3A0JP26 581 aa10.78□□□□□ -0.68
GYPA-204ENST00000504786 POTEBQ6S5H4 581 aa10.78□□□□□ -0.68
GYPA-204ENST00000504786 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
GYPA-204ENST00000504786 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
GYPA-204ENST00000504786 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
GYPA-204ENST00000504786 TBC1D12O60347 775 aa10.76□□□□□ -0.69
GYPA-204ENST00000504786 NUDT7P0C024 238 aa10.76□□□□□ -0.69
GYPA-204ENST00000504786 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
GYPA-204ENST00000504786 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
GYPA-204ENST00000504786 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
GYPA-204ENST00000504786 MFSD10Q14728 455 aa10.74□□□□□ -0.69
GYPA-204ENST00000504786 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
GYPA-204ENST00000504786 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
GYPA-204ENST00000504786 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
GYPA-204ENST00000504786 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
GYPA-204ENST00000504786 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
GYPA-204ENST00000504786 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
GYPA-204ENST00000504786 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
GYPA-204ENST00000504786 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
GYPA-204ENST00000504786 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
GYPA-204ENST00000504786 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
GYPA-204ENST00000504786 EMILIN3Q9NT22 766 aa10.62□□□□□ -0.71
GYPA-204ENST00000504786 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
GYPA-204ENST00000504786 WDR70Q9NW82 654 aa10.6□□□□□ -0.71
GYPA-204ENST00000504786 EVI5O60447 810 aa10.59□□□□□ -0.71
GYPA-204ENST00000504786 SPNS2Q8IVW8 549 aa10.58□□□□□ -0.72
GYPA-204ENST00000504786 TSHZ2Q9NRE2 1034 aa10.58□□□□□ -0.72
GYPA-204ENST00000504786 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
GYPA-204ENST00000504786 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
GYPA-204ENST00000504786 PBX2P40425 430 aa10.56□□□□□ -0.72
GYPA-204ENST00000504786 E2F4Q16254 413 aa10.53□□□□□ -0.72
GYPA-204ENST00000504786 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
GYPA-204ENST00000504786 DPYSL4O14531 572 aa10.52□□□□□ -0.73
GYPA-204ENST00000504786 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
GYPA-204ENST00000504786 POTEEQ6S8J3 1075 aa10.52□□□□□ -0.73
GYPA-204ENST00000504786 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
GYPA-204ENST00000504786 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
GYPA-204ENST00000504786 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
GYPA-204ENST00000504786 FOSBP53539 338 aa10.51□□□□□ -0.73
GYPA-204ENST00000504786 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
GYPA-204ENST00000504786 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
GYPA-204ENST00000504786 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
GYPA-204ENST00000504786 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
GYPA-204ENST00000504786 PSEN2P49810 448 aa10.46□□□□□ -0.73
GYPA-204ENST00000504786 ZDHHC16Q969W1 377 aa10.45□□□□□ -0.74
GYPA-204ENST00000504786 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
GYPA-204ENST00000504786 KCNK17Q96T54 332 aa10.44□□□□□ -0.74
GYPA-204ENST00000504786 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
GYPA-204ENST00000504786 PHF14O94880 888 aa10.43□□□□□ -0.74
GYPA-204ENST00000504786 PTGER2P43116 358 aa10.43□□□□□ -0.74
GYPA-204ENST00000504786 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
GYPA-204ENST00000504786 PCDHGA10Q9Y5H3 936 aa10.43□□□□□ -0.74
GYPA-204ENST00000504786 PTPREP23469 700 aa10.42□□□□□ -0.74
GYPA-204ENST00000504786 PDIA6Q15084 440 aa10.42□□□□□ -0.74
GYPA-204ENST00000504786 DMRTA1Q5VZB9 504 aa10.42□□□□□ -0.74
GYPA-204ENST00000504786 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
GYPA-204ENST00000504786 TK2O00142 265 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 EPAS1Q99814 870 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
GYPA-204ENST00000504786 DDX12PQ92771 950 aa10.39□□□□□ -0.75
GYPA-204ENST00000504786 HAP1P54257 671 aaPredicted RBP10.38□□□□□ -0.75
GYPA-204ENST00000504786 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms