RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
HOXC6-203ENST00000504315 POGZQ7Z3K3 1410 aa22.11■■□□□ 1.13
HOXC6-203ENST00000504315 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
HOXC6-203ENST00000504315 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
HOXC6-203ENST00000504315 EFCAB2Q5VUJ9 269 aa22.07■■□□□ 1.12
HOXC6-203ENST00000504315 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
HOXC6-203ENST00000504315 KDM5CP41229 1560 aa22.05■■□□□ 1.12
HOXC6-203ENST00000504315 SIGLEC1Q9BZZ2 1709 aa22.05■■□□□ 1.12
HOXC6-203ENST00000504315 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
HOXC6-203ENST00000504315 ABCC1P33527 1531 aa22.03■■□□□ 1.12
HOXC6-203ENST00000504315 ZNF518AQ6AHZ1 1483 aa22.02■■□□□ 1.12
HOXC6-203ENST00000504315 YEATS2Q9ULM3 1422 aa22■■□□□ 1.11
HOXC6-203ENST00000504315 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
HOXC6-203ENST00000504315 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
HOXC6-203ENST00000504315 GPATCH8Q9UKJ3 1502 aaKnown RBP21.97■■□□□ 1.11
HOXC6-203ENST00000504315 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
HOXC6-203ENST00000504315 SAMD9LQ8IVG5 1584 aa21.96■■□□□ 1.11
HOXC6-203ENST00000504315 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
HOXC6-203ENST00000504315 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
HOXC6-203ENST00000504315 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
HOXC6-203ENST00000504315 ATP10AO60312 1499 aa21.92■■□□□ 1.1
HOXC6-203ENST00000504315 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
HOXC6-203ENST00000504315 RIMS1Q86UR5 1692 aaKnown RBP21.91■■□□□ 1.1
HOXC6-203ENST00000504315 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 DIP2CQ9Y2E4 1556 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 PTPRMP28827 1452 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 MLH3Q9UHC1 1453 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 C9orf84Q5VXU9 1444 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 ABCA6Q8N139 1617 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 FER1L4A9Z1Z3 1794 aa21.9■■□□□ 1.1
HOXC6-203ENST00000504315 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.1
HOXC6-203ENST00000504315 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.1
HOXC6-203ENST00000504315 AFAP1Q8N556 730 aa21.88■■□□□ 1.09
HOXC6-203ENST00000504315 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
HOXC6-203ENST00000504315 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
HOXC6-203ENST00000504315 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
HOXC6-203ENST00000504315 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
HOXC6-203ENST00000504315 KIAA1107Q9UPP5 1409 aa21.85■■□□□ 1.09
HOXC6-203ENST00000504315 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
HOXC6-203ENST00000504315 INO80Q9ULG1 1556 aaPredicted RBP21.81■■□□□ 1.08
HOXC6-203ENST00000504315 AGLP35573 1532 aa21.8■■□□□ 1.08
HOXC6-203ENST00000504315 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
HOXC6-203ENST00000504315 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
HOXC6-203ENST00000504315 LRRC9Q6ZRR7 1453 aa21.78■■□□□ 1.08
HOXC6-203ENST00000504315 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
HOXC6-203ENST00000504315 ATP7AQ04656 1500 aa21.76■■□□□ 1.07
HOXC6-203ENST00000504315 MBD5Q9P267 1494 aa21.75■■□□□ 1.07
HOXC6-203ENST00000504315 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.07
HOXC6-203ENST00000504315 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
HOXC6-203ENST00000504315 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
HOXC6-203ENST00000504315 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
HOXC6-203ENST00000504315 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
HOXC6-203ENST00000504315 SPAG9O60271 1321 aaKnown RBP21.7■■□□□ 1.06
HOXC6-203ENST00000504315 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
HOXC6-203ENST00000504315 LMTK3Q96Q04 1460 aa21.7■■□□□ 1.06
HOXC6-203ENST00000504315 MLECQ14165 292 aa21.69■■□□□ 1.06
HOXC6-203ENST00000504315 ZNF644Q9H582 1327 aaPredicted RBP21.68■■□□□ 1.06
HOXC6-203ENST00000504315 C3P01024 1663 aa21.67■■□□□ 1.06
HOXC6-203ENST00000504315 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
HOXC6-203ENST00000504315 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
HOXC6-203ENST00000504315 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
HOXC6-203ENST00000504315 KANK4Q5T7N3 995 aaPredicted RBP21.65■■□□□ 1.06
HOXC6-203ENST00000504315 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.06
HOXC6-203ENST00000504315 MROH2AA6NES4 1674 aa21.64■■□□□ 1.05
HOXC6-203ENST00000504315 A2MP01023 1474 aa21.64■■□□□ 1.05
HOXC6-203ENST00000504315 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
HOXC6-203ENST00000504315 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
HOXC6-203ENST00000504315 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
HOXC6-203ENST00000504315 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
HOXC6-203ENST00000504315 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
HOXC6-203ENST00000504315 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
HOXC6-203ENST00000504315 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
HOXC6-203ENST00000504315 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
HOXC6-203ENST00000504315 DHX29Q7Z478 1369 aaKnown RBP21.51■■□□□ 1.03
HOXC6-203ENST00000504315 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
HOXC6-203ENST00000504315 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
HOXC6-203ENST00000504315 APLP2Q06481 763 aa21.5■■□□□ 1.03
HOXC6-203ENST00000504315 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
HOXC6-203ENST00000504315 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
HOXC6-203ENST00000504315 NPATQ14207 1427 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 STRCQ7RTU9 1775 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
HOXC6-203ENST00000504315 EIF2AK4Q9P2K8 1649 aaKnown RBP21.45■■□□□ 1.02
HOXC6-203ENST00000504315 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 ZMYM3Q14202 1370 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
HOXC6-203ENST00000504315 HSPA2P54652 639 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 SHANK2Q9UPX8 1470 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
HOXC6-203ENST00000504315 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
HOXC6-203ENST00000504315 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms