RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
KLHL3-204ENST00000504208 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
KLHL3-204ENST00000504208 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
KLHL3-204ENST00000504208 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
KLHL3-204ENST00000504208 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
KLHL3-204ENST00000504208 PLEKHD1A6NEE1 506 aa14.03□□□□□ -0.16
KLHL3-204ENST00000504208 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.17
KLHL3-204ENST00000504208 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
KLHL3-204ENST00000504208 GLI2P10070 1586 aa13.99□□□□□ -0.17
KLHL3-204ENST00000504208 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
KLHL3-204ENST00000504208 ITGAEP38570 1179 aa13.99□□□□□ -0.17
KLHL3-204ENST00000504208 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
KLHL3-204ENST00000504208 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
KLHL3-204ENST00000504208 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
KLHL3-204ENST00000504208 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
KLHL3-204ENST00000504208 AKNAQ7Z591 1439 aa13.96□□□□□ -0.17
KLHL3-204ENST00000504208 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
KLHL3-204ENST00000504208 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.17
KLHL3-204ENST00000504208 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
KLHL3-204ENST00000504208 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
KLHL3-204ENST00000504208 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
KLHL3-204ENST00000504208 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
KLHL3-204ENST00000504208 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
KLHL3-204ENST00000504208 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
KLHL3-204ENST00000504208 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
KLHL3-204ENST00000504208 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
KLHL3-204ENST00000504208 PTPRKQ15262 1439 aa13.9□□□□□ -0.18
KLHL3-204ENST00000504208 NAIPQ13075 1403 aa13.89□□□□□ -0.19
KLHL3-204ENST00000504208 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
KLHL3-204ENST00000504208 DNMT1P26358 1616 aaKnown RBP13.89□□□□□ -0.19
KLHL3-204ENST00000504208 ABCC1P33527 1531 aa13.89□□□□□ -0.19
KLHL3-204ENST00000504208 ROCK1Q13464 1354 aa13.89□□□□□ -0.19
KLHL3-204ENST00000504208 PLCH2O75038 1416 aa13.89□□□□□ -0.19
KLHL3-204ENST00000504208 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
KLHL3-204ENST00000504208 SYCP2Q9BX26 1530 aa13.87□□□□□ -0.19
KLHL3-204ENST00000504208 FANCAO15360 1455 aa13.87□□□□□ -0.19
KLHL3-204ENST00000504208 ADGBQ8N7X0 1667 aa13.86□□□□□ -0.19
KLHL3-204ENST00000504208 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
KLHL3-204ENST00000504208 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
KLHL3-204ENST00000504208 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.19
KLHL3-204ENST00000504208 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
KLHL3-204ENST00000504208 TEX14Q8IWB6 1497 aa13.83□□□□□ -0.2
KLHL3-204ENST00000504208 NEO1Q92859 1461 aa13.82□□□□□ -0.2
KLHL3-204ENST00000504208 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
KLHL3-204ENST00000504208 ADGRL1O94910 1474 aa13.81□□□□□ -0.2
KLHL3-204ENST00000504208 DAPK1P53355 1430 aa13.81□□□□□ -0.2
KLHL3-204ENST00000504208 ZNF777Q9ULD5 760 aaPredicted RBP13.8□□□□□ -0.2
KLHL3-204ENST00000504208 GCC2Q8IWJ2 1684 aa13.8□□□□□ -0.2
KLHL3-204ENST00000504208 ZNF644Q9H582 1327 aaPredicted RBP13.8□□□□□ -0.2
KLHL3-204ENST00000504208 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
KLHL3-204ENST00000504208 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
KLHL3-204ENST00000504208 ABCC5O15440 1437 aa13.79□□□□□ -0.2
KLHL3-204ENST00000504208 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
KLHL3-204ENST00000504208 SHANK2Q9UPX8 1470 aa13.78□□□□□ -0.2
KLHL3-204ENST00000504208 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
KLHL3-204ENST00000504208 INO80Q9ULG1 1556 aaPredicted RBP13.78□□□□□ -0.2
KLHL3-204ENST00000504208 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
KLHL3-204ENST00000504208 MBD5Q9P267 1494 aa13.77□□□□□ -0.2
KLHL3-204ENST00000504208 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
KLHL3-204ENST00000504208 KDM5CP41229 1560 aa13.76□□□□□ -0.21
KLHL3-204ENST00000504208 ADGRL2O95490 1459 aa13.75□□□□□ -0.21
KLHL3-204ENST00000504208 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
KLHL3-204ENST00000504208 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
KLHL3-204ENST00000504208 ZFYVE16Q7Z3T8 1539 aa13.75□□□□□ -0.21
KLHL3-204ENST00000504208 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
KLHL3-204ENST00000504208 POGZQ7Z3K3 1410 aa13.74□□□□□ -0.21
KLHL3-204ENST00000504208 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
KLHL3-204ENST00000504208 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
KLHL3-204ENST00000504208 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
KLHL3-204ENST00000504208 PPP1R15AO75807 674 aaPredicted RBP13.73□□□□□ -0.21
KLHL3-204ENST00000504208 RRP7BPQ9NSQ0 103 aa13.73□□□□□ -0.21
KLHL3-204ENST00000504208 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
KLHL3-204ENST00000504208 KDM6BO15054 1643 aa13.72□□□□□ -0.21
KLHL3-204ENST00000504208 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
KLHL3-204ENST00000504208 ZMYM4Q5VZL5 1548 aa13.72□□□□□ -0.21
KLHL3-204ENST00000504208 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
KLHL3-204ENST00000504208 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
KLHL3-204ENST00000504208 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.21
KLHL3-204ENST00000504208 NCOA1Q15788 1441 aa13.71□□□□□ -0.21
KLHL3-204ENST00000504208 DENND4BO75064 1496 aaPredicted RBP13.71□□□□□ -0.21
KLHL3-204ENST00000504208 ABCA6Q8N139 1617 aa13.71□□□□□ -0.22
KLHL3-204ENST00000504208 HNRNPMP52272 730 aaKnown RBP eCLIP13.71□□□□□ -0.22
KLHL3-204ENST00000504208 ANKRD30AQ9BXX3 1397 aa13.7□□□□□ -0.22
KLHL3-204ENST00000504208 TONSLQ96HA7 1378 aa13.69□□□□□ -0.22
KLHL3-204ENST00000504208 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
KLHL3-204ENST00000504208 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
KLHL3-204ENST00000504208 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
KLHL3-204ENST00000504208 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
KLHL3-204ENST00000504208 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
KLHL3-204ENST00000504208 TSPY4P0CV99 314 aa13.66□□□□□ -0.22
KLHL3-204ENST00000504208 TSPY10P0CW01 314 aa13.66□□□□□ -0.22
KLHL3-204ENST00000504208 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.23
KLHL3-204ENST00000504208 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
KLHL3-204ENST00000504208 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
KLHL3-204ENST00000504208 EIF2AK4Q9P2K8 1649 aaKnown RBP13.63□□□□□ -0.23
KLHL3-204ENST00000504208 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
KLHL3-204ENST00000504208 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
KLHL3-204ENST00000504208 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
KLHL3-204ENST00000504208 ANKRD30BQ9BXX2 1392 aa13.62□□□□□ -0.23
KLHL3-204ENST00000504208 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms