RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 YEATS2Q9ULM3 1422 aa14.65□□□□□ -0.06
NR1I3-219ENST00000504010 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
NR1I3-219ENST00000504010 FER1L4A9Z1Z3 1794 aa14.63□□□□□ -0.07
NR1I3-219ENST00000504010 ARID3CA6NKF2 412 aa14.63□□□□□ -0.07
NR1I3-219ENST00000504010 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
NR1I3-219ENST00000504010 RAPGEF6Q8TEU7 1601 aa14.61□□□□□ -0.07
NR1I3-219ENST00000504010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
NR1I3-219ENST00000504010 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
NR1I3-219ENST00000504010 SETD1BQ9UPS6 1966 aaKnown RBP14.58□□□□□ -0.07
NR1I3-219ENST00000504010 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
NR1I3-219ENST00000504010 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
NR1I3-219ENST00000504010 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
NR1I3-219ENST00000504010 SAMD9Q5K651 1589 aa14.56□□□□□ -0.08
NR1I3-219ENST00000504010 SIGLEC1Q9BZZ2 1709 aa14.56□□□□□ -0.08
NR1I3-219ENST00000504010 PTPRTO14522 1441 aa14.56□□□□□ -0.08
NR1I3-219ENST00000504010 PLEKHD1A6NEE1 506 aa14.55□□□□□ -0.08
NR1I3-219ENST00000504010 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
NR1I3-219ENST00000504010 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
NR1I3-219ENST00000504010 ARHGAP35Q9NRY4 1499 aa14.53□□□□□ -0.08
NR1I3-219ENST00000504010 MLECQ14165 292 aa14.53□□□□□ -0.08
NR1I3-219ENST00000504010 HECW1Q76N89 1606 aa14.52□□□□□ -0.08
NR1I3-219ENST00000504010 ATP10AO60312 1499 aa14.52□□□□□ -0.08
NR1I3-219ENST00000504010 CLIP1P30622 1438 aa14.52□□□□□ -0.08
NR1I3-219ENST00000504010 CEP162Q5TB80 1403 aa14.52□□□□□ -0.08
NR1I3-219ENST00000504010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
NR1I3-219ENST00000504010 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
NR1I3-219ENST00000504010 ATP1B4Q9UN42 357 aaPredicted RBP14.48□□□□□ -0.09
NR1I3-219ENST00000504010 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
NR1I3-219ENST00000504010 SCAPERQ9BY12 1400 aa14.47□□□□□ -0.09
NR1I3-219ENST00000504010 PLCH2O75038 1416 aa14.45□□□□□ -0.1
NR1I3-219ENST00000504010 CEBPAP49715 358 aaPredicted RBP14.45□□□□□ -0.1
NR1I3-219ENST00000504010 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
NR1I3-219ENST00000504010 REREQ9P2R6 1566 aa14.41□□□□□ -0.1
NR1I3-219ENST00000504010 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
NR1I3-219ENST00000504010 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
NR1I3-219ENST00000504010 TRAPPC8Q9Y2L5 1435 aa14.4□□□□□ -0.1
NR1I3-219ENST00000504010 C3P01024 1663 aa14.39□□□□□ -0.11
NR1I3-219ENST00000504010 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
NR1I3-219ENST00000504010 KDM5CP41229 1560 aa14.38□□□□□ -0.11
NR1I3-219ENST00000504010 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
NR1I3-219ENST00000504010 AGLP35573 1532 aa14.36□□□□□ -0.11
NR1I3-219ENST00000504010 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
NR1I3-219ENST00000504010 CNTLNQ9NXG0 1405 aa14.35□□□□□ -0.11
NR1I3-219ENST00000504010 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
NR1I3-219ENST00000504010 CDK13Q14004 1512 aaKnown RBP14.34□□□□□ -0.11
NR1I3-219ENST00000504010 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
NR1I3-219ENST00000504010 NPATQ14207 1427 aa14.32□□□□□ -0.12
NR1I3-219ENST00000504010 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
NR1I3-219ENST00000504010 CAMSAP1Q5T5Y3 1602 aa14.31□□□□□ -0.12
NR1I3-219ENST00000504010 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
NR1I3-219ENST00000504010 LRRIQ1Q96JM4 1722 aa14.3□□□□□ -0.12
NR1I3-219ENST00000504010 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
NR1I3-219ENST00000504010 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
NR1I3-219ENST00000504010 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-219ENST00000504010 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
NR1I3-219ENST00000504010 CASKIN1Q8WXD9 1431 aa14.29□□□□□ -0.12
NR1I3-219ENST00000504010 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
NR1I3-219ENST00000504010 ARHGAP5Q13017 1502 aa14.28□□□□□ -0.12
NR1I3-219ENST00000504010 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
NR1I3-219ENST00000504010 PKD2Q13563 968 aa14.28□□□□□ -0.12
NR1I3-219ENST00000504010 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
NR1I3-219ENST00000504010 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
NR1I3-219ENST00000504010 KIF14Q15058 1648 aa14.27□□□□□ -0.12
NR1I3-219ENST00000504010 ZNF335Q9H4Z2 1342 aaPredicted RBP14.27□□□□□ -0.12
NR1I3-219ENST00000504010 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
NR1I3-219ENST00000504010 PPARGC1BQ86YN6 1023 aaKnown RBP14.25□□□□□ -0.13
NR1I3-219ENST00000504010 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
NR1I3-219ENST00000504010 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
NR1I3-219ENST00000504010 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
NR1I3-219ENST00000504010 TROQ12816 1431 aaPredicted RBP14.23□□□□□ -0.13
NR1I3-219ENST00000504010 TOM1O60784 492 aa14.22□□□□□ -0.13
NR1I3-219ENST00000504010 ZMYM3Q14202 1370 aa14.22□□□□□ -0.13
NR1I3-219ENST00000504010 HSPA1LP34931 641 aa14.21□□□□□ -0.13
NR1I3-219ENST00000504010 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.14
NR1I3-219ENST00000504010 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
NR1I3-219ENST00000504010 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
NR1I3-219ENST00000504010 ABCC1P33527 1531 aa14.2□□□□□ -0.14
NR1I3-219ENST00000504010 KIDINS220Q9ULH0 1771 aa14.19□□□□□ -0.14
NR1I3-219ENST00000504010 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
NR1I3-219ENST00000504010 CPS1P31327 1500 aa14.19□□□□□ -0.14
NR1I3-219ENST00000504010 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-219ENST00000504010 ITSN2Q9NZM3 1697 aa14.18□□□□□ -0.14
NR1I3-219ENST00000504010 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
NR1I3-219ENST00000504010 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
NR1I3-219ENST00000504010 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
NR1I3-219ENST00000504010 APLP2Q06481 763 aa14.16□□□□□ -0.14
NR1I3-219ENST00000504010 TIAM1Q13009 1591 aa14.15□□□□□ -0.14
NR1I3-219ENST00000504010 PIP4K2BP78356 416 aa14.15□□□□□ -0.14
NR1I3-219ENST00000504010 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
NR1I3-219ENST00000504010 PTPRKQ15262 1439 aa14.14□□□□□ -0.15
NR1I3-219ENST00000504010 CLTCQ00610 1675 aaKnown RBP14.13□□□□□ -0.15
NR1I3-219ENST00000504010 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
NR1I3-219ENST00000504010 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
NR1I3-219ENST00000504010 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
NR1I3-219ENST00000504010 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
NR1I3-219ENST00000504010 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
NR1I3-219ENST00000504010 LRRC9Q6ZRR7 1453 aa14.09□□□□□ -0.15
NR1I3-219ENST00000504010 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
NR1I3-219ENST00000504010 DNMT1P26358 1616 aaKnown RBP14.08□□□□□ -0.15
NR1I3-219ENST00000504010 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms