RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM5-207ENST00000503974 SUPT6HQ7KZ85 1726 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-207ENST00000503974 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
PDLIM5-207ENST00000503974 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-207ENST00000503974 PKNOX2Q96KN3 472 aa14.08□□□□□ -0.16
PDLIM5-207ENST00000503974 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
PDLIM5-207ENST00000503974 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
PDLIM5-207ENST00000503974 PPRC1Q5VV67 1664 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-207ENST00000503974 MYO5CQ9NQX4 1742 aa14.06□□□□□ -0.16
PDLIM5-207ENST00000503974 CDC42BPAQ5VT25 1732 aa14.06□□□□□ -0.16
PDLIM5-207ENST00000503974 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
PDLIM5-207ENST00000503974 FAM69CQ0P6D2 419 aa14.05□□□□□ -0.16
PDLIM5-207ENST00000503974 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
PDLIM5-207ENST00000503974 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
PDLIM5-207ENST00000503974 CDC42BPBQ9Y5S2 1711 aa14.03□□□□□ -0.16
PDLIM5-207ENST00000503974 CD109Q6YHK3 1445 aa14.02□□□□□ -0.16
PDLIM5-207ENST00000503974 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
PDLIM5-207ENST00000503974 PLCH2O75038 1416 aa14.02□□□□□ -0.17
PDLIM5-207ENST00000503974 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
PDLIM5-207ENST00000503974 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-207ENST00000503974 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-207ENST00000503974 CFAP74Q9C0B2 1584 aa14□□□□□ -0.17
PDLIM5-207ENST00000503974 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
PDLIM5-207ENST00000503974 MYOM3Q5VTT5 1437 aa13.99□□□□□ -0.17
PDLIM5-207ENST00000503974 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
PDLIM5-207ENST00000503974 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
PDLIM5-207ENST00000503974 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
PDLIM5-207ENST00000503974 NEO1Q92859 1461 aa13.97□□□□□ -0.17
PDLIM5-207ENST00000503974 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-207ENST00000503974 MIA2Q96PC5 1412 aa13.96□□□□□ -0.17
PDLIM5-207ENST00000503974 FANCAO15360 1455 aa13.96□□□□□ -0.17
PDLIM5-207ENST00000503974 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.17
PDLIM5-207ENST00000503974 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-207ENST00000503974 ERICH6BQ5W0A0 696 aa13.95□□□□□ -0.18
PDLIM5-207ENST00000503974 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
PDLIM5-207ENST00000503974 ABCC1P33527 1531 aa13.93□□□□□ -0.18
PDLIM5-207ENST00000503974 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
PDLIM5-207ENST00000503974 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-207ENST00000503974 AKNAQ7Z591 1439 aa13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 EFCAB2Q5VUJ9 269 aa13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 CAMSAP2Q08AD1 1489 aa13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-207ENST00000503974 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.18
PDLIM5-207ENST00000503974 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
PDLIM5-207ENST00000503974 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-207ENST00000503974 ADGRL1O94910 1474 aa13.89□□□□□ -0.19
PDLIM5-207ENST00000503974 ARHGEF12Q9NZN5 1544 aa13.88□□□□□ -0.19
PDLIM5-207ENST00000503974 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
PDLIM5-207ENST00000503974 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
PDLIM5-207ENST00000503974 ARHGEF5Q12774 1597 aa13.87□□□□□ -0.19
PDLIM5-207ENST00000503974 FRMPD1Q5SYB0 1578 aa13.87□□□□□ -0.19
PDLIM5-207ENST00000503974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDLIM5-207ENST00000503974 MBD5Q9P267 1494 aa13.87□□□□□ -0.19
PDLIM5-207ENST00000503974 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-207ENST00000503974 POGZQ7Z3K3 1410 aa13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 KDM5CP41229 1560 aa13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 KDM6BO15054 1643 aa13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 ZNF644Q9H582 1327 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 DENND4BO75064 1496 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-207ENST00000503974 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-207ENST00000503974 ZMYM4Q5VZL5 1548 aa13.83□□□□□ -0.19
PDLIM5-207ENST00000503974 ZNF518AQ6AHZ1 1483 aa13.83□□□□□ -0.2
PDLIM5-207ENST00000503974 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
PDLIM5-207ENST00000503974 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
PDLIM5-207ENST00000503974 CCDC141Q6ZP82 1450 aa13.82□□□□□ -0.2
PDLIM5-207ENST00000503974 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
PDLIM5-207ENST00000503974 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-207ENST00000503974 MAST1Q9Y2H9 1570 aa13.81□□□□□ -0.2
PDLIM5-207ENST00000503974 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-207ENST00000503974 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
PDLIM5-207ENST00000503974 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-207ENST00000503974 DAPK1P53355 1430 aa13.79□□□□□ -0.2
PDLIM5-207ENST00000503974 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-207ENST00000503974 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
PDLIM5-207ENST00000503974 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
PDLIM5-207ENST00000503974 MLH3Q9UHC1 1453 aa13.78□□□□□ -0.2
PDLIM5-207ENST00000503974 ABCC5O15440 1437 aa13.78□□□□□ -0.2
PDLIM5-207ENST00000503974 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
PDLIM5-207ENST00000503974 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
PDLIM5-207ENST00000503974 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.25e-6■■■□□ 18.5
PDLIM5-207ENST00000503974 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.2
PDLIM5-207ENST00000503974 KIDINS220Q9ULH0 1771 aa13.77□□□□□ -0.21
PDLIM5-207ENST00000503974 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
PDLIM5-207ENST00000503974 RAPGEF3O95398 923 aa13.76□□□□□ -0.21
PDLIM5-207ENST00000503974 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
PDLIM5-207ENST00000503974 AFAP1Q8N556 730 aa13.75□□□□□ -0.21
PDLIM5-207ENST00000503974 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
PDLIM5-207ENST00000503974 ARHGEF40Q8TER5 1519 aa13.75□□□□□ -0.21
PDLIM5-207ENST00000503974 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
PDLIM5-207ENST00000503974 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-207ENST00000503974 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
PDLIM5-207ENST00000503974 PTPRKQ15262 1439 aa13.74□□□□□ -0.21
PDLIM5-207ENST00000503974 C9orf84Q5VXU9 1444 aa13.74□□□□□ -0.21
PDLIM5-207ENST00000503974 ABCA6Q8N139 1617 aa13.73□□□□□ -0.21
PDLIM5-207ENST00000503974 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
PDLIM5-207ENST00000503974 NEFLP07196 543 aa13.72□□□□□ -0.21
PDLIM5-207ENST00000503974 REREQ9P2R6 1566 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms