RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 ARHGAP5Q13017 1502 aa29.5■■■□□ 2.31
RNF4-204ENST00000503659 POGZQ7Z3K3 1410 aa29.49■■■□□ 2.31
RNF4-204ENST00000503659 SCAPERQ9BY12 1400 aa29.48■■■□□ 2.31
RNF4-204ENST00000503659 CDC42BPAQ5VT25 1732 aa29.48■■■□□ 2.31
RNF4-204ENST00000503659 EFCAB2Q5VUJ9 269 aa29.46■■■□□ 2.31
RNF4-204ENST00000503659 ADAMTSL3P82987 1691 aa29.46■■■□□ 2.31
RNF4-204ENST00000503659 MAGI2Q86UL8 1455 aa29.45■■■□□ 2.31
RNF4-204ENST00000503659 ZFYVE16Q7Z3T8 1539 aa29.44■■■□□ 2.3
RNF4-204ENST00000503659 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
RNF4-204ENST00000503659 BCORL1Q5H9F3 1711 aa29.42■■■□□ 2.3
RNF4-204ENST00000503659 SIGLEC1Q9BZZ2 1709 aa29.41■■■□□ 2.3
RNF4-204ENST00000503659 HECW2Q9P2P5 1572 aa29.41■■■□□ 2.3
RNF4-204ENST00000503659 YEATS2Q9ULM3 1422 aa29.41■■■□□ 2.3
RNF4-204ENST00000503659 ARID4BQ4LE39 1312 aaPredicted RBP29.41■■■□□ 2.3
RNF4-204ENST00000503659 ABCC1P33527 1531 aa29.38■■■□□ 2.29
RNF4-204ENST00000503659 KDM5CP41229 1560 aa29.38■■■□□ 2.29
RNF4-204ENST00000503659 PTPRMP28827 1452 aa29.37■■■□□ 2.29
RNF4-204ENST00000503659 ITSN2Q9NZM3 1697 aa29.36■■■□□ 2.29
RNF4-204ENST00000503659 ZNF518AQ6AHZ1 1483 aa29.36■■■□□ 2.29
RNF4-204ENST00000503659 ARHGEF12Q9NZN5 1544 aa29.32■■■□□ 2.28
RNF4-204ENST00000503659 MADDQ8WXG6 1647 aa29.31■■■□□ 2.28
RNF4-204ENST00000503659 EHBP1L1Q8N3D4 1523 aa29.31■■■□□ 2.28
RNF4-204ENST00000503659 GPATCH8Q9UKJ3 1502 aaKnown RBP29.31■■■□□ 2.28
RNF4-204ENST00000503659 MTUS2Q5JR59 1369 aa29.3■■■□□ 2.28
RNF4-204ENST00000503659 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
RNF4-204ENST00000503659 AFAP1Q8N556 730 aa29.26■■■□□ 2.27
RNF4-204ENST00000503659 TRAPPC8Q9Y2L5 1435 aa29.26■■■□□ 2.27
RNF4-204ENST00000503659 VPS8Q8N3P4 1428 aa29.25■■■□□ 2.27
RNF4-204ENST00000503659 TIAM1Q13009 1591 aa29.25■■■□□ 2.27
RNF4-204ENST00000503659 ATP10AO60312 1499 aa29.24■■■□□ 2.27
RNF4-204ENST00000503659 DIP2CQ9Y2E4 1556 aa29.23■■■□□ 2.27
RNF4-204ENST00000503659 ABCA6Q8N139 1617 aa29.23■■■□□ 2.27
RNF4-204ENST00000503659 C9orf84Q5VXU9 1444 aa29.22■■■□□ 2.27
RNF4-204ENST00000503659 RIMS1Q86UR5 1692 aaKnown RBP29.21■■■□□ 2.27
RNF4-204ENST00000503659 SYCP2Q9BX26 1530 aa29.21■■■□□ 2.27
RNF4-204ENST00000503659 MLH3Q9UHC1 1453 aa29.21■■■□□ 2.27
RNF4-204ENST00000503659 CCNB3Q8WWL7 1395 aa29.2■■■□□ 2.26
RNF4-204ENST00000503659 KIDINS220Q9ULH0 1771 aa29.18■■■□□ 2.26
RNF4-204ENST00000503659 REREQ9P2R6 1566 aa29.17■■■□□ 2.26
RNF4-204ENST00000503659 SUPT6HQ7KZ85 1726 aaKnown RBP29.16■■■□□ 2.26
RNF4-204ENST00000503659 FER1L4A9Z1Z3 1794 aa29.16■■■□□ 2.26
RNF4-204ENST00000503659 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
RNF4-204ENST00000503659 CFDP1Q9UEE9 299 aaPredicted RBP29.13■■■□□ 2.25
RNF4-204ENST00000503659 KIAA1107Q9UPP5 1409 aa29.11■■■□□ 2.25
RNF4-204ENST00000503659 PLEKHH2Q8IVE3 1493 aa29.11■■■□□ 2.25
RNF4-204ENST00000503659 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
RNF4-204ENST00000503659 MLECQ14165 292 aa29.09■■■□□ 2.25
RNF4-204ENST00000503659 HNRNPMP52272 730 aaKnown RBP eCLIP29.07■■■□□ 2.24
RNF4-204ENST00000503659 MAP3K1Q13233 1512 aa29.07■■■□□ 2.24
RNF4-204ENST00000503659 LRRC9Q6ZRR7 1453 aa29.07■■■□□ 2.24
RNF4-204ENST00000503659 MYT1LQ9UL68 1186 aa29.07■■■□□ 2.24
RNF4-204ENST00000503659 INO80Q9ULG1 1556 aaPredicted RBP29.07■■■□□ 2.24
RNF4-204ENST00000503659 LMTK3Q96Q04 1460 aa29.05■■■□□ 2.24
RNF4-204ENST00000503659 AGLP35573 1532 aa29.04■■■□□ 2.24
RNF4-204ENST00000503659 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
RNF4-204ENST00000503659 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
RNF4-204ENST00000503659 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
RNF4-204ENST00000503659 SPAG9O60271 1321 aaKnown RBP28.99■■■□□ 2.23
RNF4-204ENST00000503659 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
RNF4-204ENST00000503659 ILDR1Q86SU0 546 aaPredicted RBP28.95■■■□□ 2.22
RNF4-204ENST00000503659 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
RNF4-204ENST00000503659 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
RNF4-204ENST00000503659 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
RNF4-204ENST00000503659 ADGBQ8N7X0 1667 aa28.92■■■□□ 2.22
RNF4-204ENST00000503659 A2MP01023 1474 aa28.88■■■□□ 2.21
RNF4-204ENST00000503659 CCDC141Q6ZP82 1450 aa28.88■■■□□ 2.21
RNF4-204ENST00000503659 ARHGEF5Q12774 1597 aa28.87■■■□□ 2.21
RNF4-204ENST00000503659 C3P01024 1663 aa28.86■■■□□ 2.21
RNF4-204ENST00000503659 ESF1Q9H501 851 aaKnown RBP28.85■■■□□ 2.21
RNF4-204ENST00000503659 RTEL1-TNFRSF6BF6WH68 1400 aa28.85■■■□□ 2.21
RNF4-204ENST00000503659 PREX1Q8TCU6 1659 aa28.84■■■□□ 2.21
RNF4-204ENST00000503659 HSPA2P54652 639 aa28.84■■■□□ 2.21
RNF4-204ENST00000503659 SETD1BQ9UPS6 1966 aaKnown RBP28.84■■■□□ 2.21
RNF4-204ENST00000503659 CEBPAP49715 358 aaPredicted RBP28.83■■■□□ 2.21
RNF4-204ENST00000503659 MYOM3Q5VTT5 1437 aa28.82■■■□□ 2.2
RNF4-204ENST00000503659 CNTLNQ9NXG0 1405 aa28.82■■■□□ 2.2
RNF4-204ENST00000503659 MROH2AA6NES4 1674 aa28.8■■■□□ 2.2
RNF4-204ENST00000503659 MIA2Q96PC5 1412 aa28.77■■■□□ 2.2
RNF4-204ENST00000503659 UHRF1BP1Q6BDS2 1440 aa28.76■■■□□ 2.19
RNF4-204ENST00000503659 CLTCQ00610 1675 aaKnown RBP28.75■■■□□ 2.19
RNF4-204ENST00000503659 RSPH4AQ5TD94 716 aa28.75■■■□□ 2.19
RNF4-204ENST00000503659 APLP2Q06481 763 aa28.73■■■□□ 2.19
RNF4-204ENST00000503659 MAST1Q9Y2H9 1570 aa28.73■■■□□ 2.19
RNF4-204ENST00000503659 FBXO41Q8TF61 875 aa28.7■■■□□ 2.18
RNF4-204ENST00000503659 DHX29Q7Z478 1369 aaKnown RBP28.7■■■□□ 2.18
RNF4-204ENST00000503659 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
RNF4-204ENST00000503659 PPP6R1Q9UPN7 881 aa28.67■■■□□ 2.18
RNF4-204ENST00000503659 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
RNF4-204ENST00000503659 NPATQ14207 1427 aa28.65■■■□□ 2.18
RNF4-204ENST00000503659 DMRT2Q9Y5R5 561 aa28.64■■■□□ 2.18
RNF4-204ENST00000503659 ZMYM3Q14202 1370 aa28.63■■■□□ 2.17
RNF4-204ENST00000503659 TSPY4P0CV99 314 aa28.63■■■□□ 2.17
RNF4-204ENST00000503659 TSPY10P0CW01 314 aa28.63■■■□□ 2.17
RNF4-204ENST00000503659 GGT6Q6P531 493 aa28.63■■■□□ 2.17
RNF4-204ENST00000503659 FGD6Q6ZV73 1430 aa28.61■■■□□ 2.17
RNF4-204ENST00000503659 TCOF1Q13428 1488 aaKnown RBP28.6■■■□□ 2.17
RNF4-204ENST00000503659 DNMT1P26358 1616 aaKnown RBP28.58■■■□□ 2.17
RNF4-204ENST00000503659 STRCQ7RTU9 1775 aa28.57■■■□□ 2.16
RNF4-204ENST00000503659 SHANK2Q9UPX8 1470 aa28.57■■■□□ 2.16
RNF4-204ENST00000503659 KIF3BO15066 747 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms