RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
SPCS3-201ENST00000503362 NESP48681 1621 aa17.44■□□□□ 0.38
SPCS3-201ENST00000503362 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
SPCS3-201ENST00000503362 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
SPCS3-201ENST00000503362 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
SPCS3-201ENST00000503362 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
SPCS3-201ENST00000503362 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SPCS3-201ENST00000503362 RALBP1Q15311 655 aa17.41■□□□□ 0.38
SPCS3-201ENST00000503362 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
SPCS3-201ENST00000503362 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
SPCS3-201ENST00000503362 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
SPCS3-201ENST00000503362 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
SPCS3-201ENST00000503362 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
SPCS3-201ENST00000503362 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
SPCS3-201ENST00000503362 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
SPCS3-201ENST00000503362 HFM1A2PYH4 1435 aa17.39■□□□□ 0.38
SPCS3-201ENST00000503362 USP47Q96K76 1375 aa17.39■□□□□ 0.37
SPCS3-201ENST00000503362 RGS3P49796 1198 aa17.38■□□□□ 0.37
SPCS3-201ENST00000503362 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
SPCS3-201ENST00000503362 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
SPCS3-201ENST00000503362 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
SPCS3-201ENST00000503362 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
SPCS3-201ENST00000503362 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.373e-9■■■■■ 35.5
SPCS3-201ENST00000503362 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
SPCS3-201ENST00000503362 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
SPCS3-201ENST00000503362 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
SPCS3-201ENST00000503362 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
SPCS3-201ENST00000503362 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
SPCS3-201ENST00000503362 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
SPCS3-201ENST00000503362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.363e-8■□□□□ 11
SPCS3-201ENST00000503362 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
SPCS3-201ENST00000503362 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
SPCS3-201ENST00000503362 NAIPQ13075 1403 aa17.33■□□□□ 0.36
SPCS3-201ENST00000503362 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
SPCS3-201ENST00000503362 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
SPCS3-201ENST00000503362 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
SPCS3-201ENST00000503362 ARXQ96QS3 562 aa17.3■□□□□ 0.36
SPCS3-201ENST00000503362 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
SPCS3-201ENST00000503362 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
SPCS3-201ENST00000503362 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
SPCS3-201ENST00000503362 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.36
SPCS3-201ENST00000503362 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
SPCS3-201ENST00000503362 SLC24A1O60721 1099 aa17.27■□□□□ 0.36
SPCS3-201ENST00000503362 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.35
SPCS3-201ENST00000503362 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
SPCS3-201ENST00000503362 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
SPCS3-201ENST00000503362 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
SPCS3-201ENST00000503362 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
SPCS3-201ENST00000503362 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
SPCS3-201ENST00000503362 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
SPCS3-201ENST00000503362 IPO9Q96P70 1041 aaKnown RBP17.25■□□□□ 0.35
SPCS3-201ENST00000503362 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
SPCS3-201ENST00000503362 PANK3Q9H999 370 aa17.24■□□□□ 0.35
SPCS3-201ENST00000503362 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
SPCS3-201ENST00000503362 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
SPCS3-201ENST00000503362 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
SPCS3-201ENST00000503362 EFCAB2Q5VUJ9 269 aa17.23■□□□□ 0.35
SPCS3-201ENST00000503362 PLIN1O60240 522 aa17.22■□□□□ 0.35
SPCS3-201ENST00000503362 BECN1Q14457 450 aa17.22■□□□□ 0.35
SPCS3-201ENST00000503362 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
SPCS3-201ENST00000503362 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
SPCS3-201ENST00000503362 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.34
SPCS3-201ENST00000503362 RRP1P56182 461 aaKnown RBP17.2■□□□□ 0.34
SPCS3-201ENST00000503362 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
SPCS3-201ENST00000503362 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
SPCS3-201ENST00000503362 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
SPCS3-201ENST00000503362 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
SPCS3-201ENST00000503362 KANK1Q14678 1352 aa17.18■□□□□ 0.34
SPCS3-201ENST00000503362 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
SPCS3-201ENST00000503362 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
SPCS3-201ENST00000503362 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
SPCS3-201ENST00000503362 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
SPCS3-201ENST00000503362 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
SPCS3-201ENST00000503362 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
SPCS3-201ENST00000503362 PTPRGP23470 1445 aa17.16■□□□□ 0.34
SPCS3-201ENST00000503362 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
SPCS3-201ENST00000503362 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
SPCS3-201ENST00000503362 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
SPCS3-201ENST00000503362 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.33
SPCS3-201ENST00000503362 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
SPCS3-201ENST00000503362 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
SPCS3-201ENST00000503362 KIF3BO15066 747 aa17.14■□□□□ 0.33
SPCS3-201ENST00000503362 PDE4AP27815 886 aa17.13■□□□□ 0.33
SPCS3-201ENST00000503362 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPCS3-201ENST00000503362 DAPK1P53355 1430 aa17.13■□□□□ 0.33
SPCS3-201ENST00000503362 GGT6Q6P531 493 aa17.13■□□□□ 0.33
SPCS3-201ENST00000503362 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
SPCS3-201ENST00000503362 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
SPCS3-201ENST00000503362 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
SPCS3-201ENST00000503362 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
SPCS3-201ENST00000503362 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
SPCS3-201ENST00000503362 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
SPCS3-201ENST00000503362 CUL7Q14999 1698 aa17.09■□□□□ 0.33
SPCS3-201ENST00000503362 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
SPCS3-201ENST00000503362 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
SPCS3-201ENST00000503362 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
SPCS3-201ENST00000503362 POGKQ9P215 609 aa17.08■□□□□ 0.33
SPCS3-201ENST00000503362 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
SPCS3-201ENST00000503362 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
SPCS3-201ENST00000503362 CDCA7LQ96GN5 454 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms