RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 MAP7D2Q96T17 732 aa14□□□□□ -0.17
AC055713.1-201ENST00000498967 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
AC055713.1-201ENST00000498967 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
AC055713.1-201ENST00000498967 PATL2C9JE40 543 aaKnown RBP13.99□□□□□ -0.17
AC055713.1-201ENST00000498967 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
AC055713.1-201ENST00000498967 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
AC055713.1-201ENST00000498967 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
AC055713.1-201ENST00000498967 EEA1Q15075 1411 aa13.98□□□□□ -0.17
AC055713.1-201ENST00000498967 AK7Q96M32 723 aa13.98□□□□□ -0.17
AC055713.1-201ENST00000498967 GPATCH3Q96I76 525 aa13.97□□□□□ -0.17
AC055713.1-201ENST00000498967 RGS3P49796 1198 aa13.96□□□□□ -0.17
AC055713.1-201ENST00000498967 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
AC055713.1-201ENST00000498967 ZNF771Q7L3S4 317 aaPredicted RBP13.96□□□□□ -0.17
AC055713.1-201ENST00000498967 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
AC055713.1-201ENST00000498967 PDE4CQ08493 712 aa13.95□□□□□ -0.18
AC055713.1-201ENST00000498967 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
AC055713.1-201ENST00000498967 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
AC055713.1-201ENST00000498967 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
AC055713.1-201ENST00000498967 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
AC055713.1-201ENST00000498967 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 ARID3AQ99856 593 aa13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 MYO6Q9UM54 1294 aa13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 NEFHP12036 1026 aa13.93□□□□□ -0.18
AC055713.1-201ENST00000498967 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
AC055713.1-201ENST00000498967 GOLGA6L19H0YKK7 550 aa13.91□□□□□ -0.18
AC055713.1-201ENST00000498967 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
AC055713.1-201ENST00000498967 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
AC055713.1-201ENST00000498967 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
AC055713.1-201ENST00000498967 HSP90B2PQ58FF3 399 aa13.9□□□□□ -0.18
AC055713.1-201ENST00000498967 CLIP1P30622 1438 aa13.9□□□□□ -0.18
AC055713.1-201ENST00000498967 IPO8O15397 1037 aaKnown RBP13.9□□□□□ -0.18
AC055713.1-201ENST00000498967 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
AC055713.1-201ENST00000498967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
AC055713.1-201ENST00000498967 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
AC055713.1-201ENST00000498967 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
AC055713.1-201ENST00000498967 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
AC055713.1-201ENST00000498967 ARGLU1Q9NWB6 273 aaPredicted RBP13.89□□□□□ -0.19
AC055713.1-201ENST00000498967 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
AC055713.1-201ENST00000498967 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
AC055713.1-201ENST00000498967 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
AC055713.1-201ENST00000498967 H0YHG0 523 aa13.87□□□□□ -0.19
AC055713.1-201ENST00000498967 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
AC055713.1-201ENST00000498967 MARCH6O60337 910 aa13.87□□□□□ -0.19
AC055713.1-201ENST00000498967 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
AC055713.1-201ENST00000498967 HOOK1Q9UJC3 728 aaKnown RBP13.86□□□□□ -0.19
AC055713.1-201ENST00000498967 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
AC055713.1-201ENST00000498967 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
AC055713.1-201ENST00000498967 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
AC055713.1-201ENST00000498967 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
AC055713.1-201ENST00000498967 ODF2Q5BJF6 829 aa13.85□□□□□ -0.19
AC055713.1-201ENST00000498967 CCDC66A2RUB6 948 aa13.85□□□□□ -0.19
AC055713.1-201ENST00000498967 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
AC055713.1-201ENST00000498967 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
AC055713.1-201ENST00000498967 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
AC055713.1-201ENST00000498967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.84□□□□□ -0.19
AC055713.1-201ENST00000498967 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.19
AC055713.1-201ENST00000498967 DDX11L8A8MPP1 907 aa13.83□□□□□ -0.2
AC055713.1-201ENST00000498967 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
AC055713.1-201ENST00000498967 KIF16BQ96L93 1317 aa13.83□□□□□ -0.2
AC055713.1-201ENST00000498967 BECN2A8MW95 431 aa13.83□□□□□ -0.2
AC055713.1-201ENST00000498967 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
AC055713.1-201ENST00000498967 ERCC4Q92889 916 aaPredicted RBP13.82□□□□□ -0.2
AC055713.1-201ENST00000498967 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 ST18O60284 1047 aa13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 SEPT11Q9NVA2 429 aaKnown RBP13.81□□□□□ -0.2
AC055713.1-201ENST00000498967 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
AC055713.1-201ENST00000498967 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
AC055713.1-201ENST00000498967 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
AC055713.1-201ENST00000498967 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
AC055713.1-201ENST00000498967 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
AC055713.1-201ENST00000498967 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
AC055713.1-201ENST00000498967 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
AC055713.1-201ENST00000498967 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
AC055713.1-201ENST00000498967 USP8P40818 1118 aa13.78□□□□□ -0.2
AC055713.1-201ENST00000498967 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
AC055713.1-201ENST00000498967 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.21
AC055713.1-201ENST00000498967 G3V3G9 751 aa13.76□□□□□ -0.21
AC055713.1-201ENST00000498967 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
AC055713.1-201ENST00000498967 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
AC055713.1-201ENST00000498967 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
AC055713.1-201ENST00000498967 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
AC055713.1-201ENST00000498967 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
AC055713.1-201ENST00000498967 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
AC055713.1-201ENST00000498967 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
AC055713.1-201ENST00000498967 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
AC055713.1-201ENST00000498967 R3HCC1Q9Y3T6 440 aaKnown RBP13.74□□□□□ -0.21
AC055713.1-201ENST00000498967 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
AC055713.1-201ENST00000498967 H3BQV1 296 aa13.73□□□□□ -0.21
AC055713.1-201ENST00000498967 IFFO2Q5TF58 517 aa13.73□□□□□ -0.21
AC055713.1-201ENST00000498967 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
AC055713.1-201ENST00000498967 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
AC055713.1-201ENST00000498967 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
AC055713.1-201ENST00000498967 POGKQ9P215 609 aa13.72□□□□□ -0.21
AC055713.1-201ENST00000498967 SPRYD3Q8NCJ5 442 aa13.71□□□□□ -0.21
AC055713.1-201ENST00000498967 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms