RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
LMBR1-219ENST00000498034 CCDC18Q5T9S5 1454 aa33.03■■■□□ 2.88
LMBR1-219ENST00000498034 YEATS2Q9ULM3 1422 aa33.02■■■□□ 2.88
LMBR1-219ENST00000498034 ZFYVE16Q7Z3T8 1539 aa33.02■■■□□ 2.88
LMBR1-219ENST00000498034 POGZQ7Z3K3 1410 aa33.02■■■□□ 2.88
LMBR1-219ENST00000498034 PTPRMP28827 1452 aa33■■■□□ 2.87
LMBR1-219ENST00000498034 MAGI2Q86UL8 1455 aa32.99■■■□□ 2.87
LMBR1-219ENST00000498034 ARHGAP5Q13017 1502 aa32.98■■■□□ 2.87
LMBR1-219ENST00000498034 MADDQ8WXG6 1647 aa32.97■■■□□ 2.87
LMBR1-219ENST00000498034 FYCO1Q9BQS8 1478 aa32.97■■■□□ 2.87
LMBR1-219ENST00000498034 SIGLEC1Q9BZZ2 1709 aa32.94■■■□□ 2.86
LMBR1-219ENST00000498034 CDC42BPBQ9Y5S2 1711 aa32.92■■■□□ 2.86
LMBR1-219ENST00000498034 AFAP1Q8N556 730 aa32.87■■■□□ 2.85
LMBR1-219ENST00000498034 RIMS1Q86UR5 1692 aaKnown RBP32.86■■■□□ 2.85
LMBR1-219ENST00000498034 PREX2Q70Z35 1606 aa32.86■■■□□ 2.85
LMBR1-219ENST00000498034 ZNF518AQ6AHZ1 1483 aa32.86■■■□□ 2.85
LMBR1-219ENST00000498034 ATP10AO60312 1499 aa32.83■■■□□ 2.85
LMBR1-219ENST00000498034 MLECQ14165 292 aa32.83■■■□□ 2.85
LMBR1-219ENST00000498034 KDM5CP41229 1560 aa32.81■■■□□ 2.84
LMBR1-219ENST00000498034 CDC42BPAQ5VT25 1732 aa32.8■■■□□ 2.84
LMBR1-219ENST00000498034 C9orf84Q5VXU9 1444 aa32.79■■■□□ 2.84
LMBR1-219ENST00000498034 MYT1LQ9UL68 1186 aa32.78■■■□□ 2.84
LMBR1-219ENST00000498034 ARHGEF12Q9NZN5 1544 aa32.77■■■□□ 2.84
LMBR1-219ENST00000498034 ABCC1P33527 1531 aa32.76■■■□□ 2.83
LMBR1-219ENST00000498034 PLPPR3Q6T4P5 718 aa32.75■■■□□ 2.83
LMBR1-219ENST00000498034 TRAPPC8Q9Y2L5 1435 aa32.75■■■□□ 2.83
LMBR1-219ENST00000498034 CEP162Q5TB80 1403 aa32.74■■■□□ 2.83
LMBR1-219ENST00000498034 ITSN2Q9NZM3 1697 aa32.72■■■□□ 2.83
LMBR1-219ENST00000498034 FER1L4A9Z1Z3 1794 aa32.7■■■□□ 2.83
LMBR1-219ENST00000498034 ZNF777Q9ULD5 760 aaPredicted RBP32.7■■■□□ 2.83
LMBR1-219ENST00000498034 GPATCH8Q9UKJ3 1502 aaKnown RBP32.69■■■□□ 2.82
LMBR1-219ENST00000498034 DIP2CQ9Y2E4 1556 aa32.69■■■□□ 2.82
LMBR1-219ENST00000498034 MLH3Q9UHC1 1453 aa32.68■■■□□ 2.82
LMBR1-219ENST00000498034 MTUS2Q5JR59 1369 aa32.67■■■□□ 2.82
LMBR1-219ENST00000498034 ABCA6Q8N139 1617 aa32.66■■■□□ 2.82
LMBR1-219ENST00000498034 LMTK3Q96Q04 1460 aa32.65■■■□□ 2.82
LMBR1-219ENST00000498034 SAMD9LQ8IVG5 1584 aa32.65■■■□□ 2.82
LMBR1-219ENST00000498034 CCNB3Q8WWL7 1395 aa32.61■■■□□ 2.81
LMBR1-219ENST00000498034 LOC105371045A0A1W2PR82 267 aa32.6■■■□□ 2.81
LMBR1-219ENST00000498034 REREQ9P2R6 1566 aa32.6■■■□□ 2.81
LMBR1-219ENST00000498034 HNRNPMP52272 730 aaKnown RBP eCLIP32.59■■■□□ 2.811e-6■■■■□ 20.7
LMBR1-219ENST00000498034 CFDP1Q9UEE9 299 aaPredicted RBP32.59■■■□□ 2.81
LMBR1-219ENST00000498034 SYCP2Q9BX26 1530 aa32.59■■■□□ 2.81
LMBR1-219ENST00000498034 KIDINS220Q9ULH0 1771 aa32.59■■■□□ 2.81
LMBR1-219ENST00000498034 ILDR1Q86SU0 546 aaPredicted RBP32.58■■■□□ 2.81
LMBR1-219ENST00000498034 CEBPAP49715 358 aaPredicted RBP32.54■■■□□ 2.8
LMBR1-219ENST00000498034 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
LMBR1-219ENST00000498034 HSPA2P54652 639 aa32.53■■■□□ 2.8
LMBR1-219ENST00000498034 AGLP35573 1532 aa32.51■■■□□ 2.79
LMBR1-219ENST00000498034 KIAA1107Q9UPP5 1409 aa32.51■■■□□ 2.79
LMBR1-219ENST00000498034 TIAM1Q13009 1591 aa32.5■■■□□ 2.79
LMBR1-219ENST00000498034 SPAG9O60271 1321 aaKnown RBP32.5■■■□□ 2.79
LMBR1-219ENST00000498034 PLEKHH2Q8IVE3 1493 aa32.49■■■□□ 2.79
LMBR1-219ENST00000498034 ZNF644Q9H582 1327 aaPredicted RBP32.45■■■□□ 2.78
LMBR1-219ENST00000498034 ATP7AQ04656 1500 aa32.41■■■□□ 2.78
LMBR1-219ENST00000498034 ESF1Q9H501 851 aaKnown RBP32.39■■■□□ 2.78
LMBR1-219ENST00000498034 INO80Q9ULG1 1556 aaPredicted RBP32.39■■■□□ 2.78
LMBR1-219ENST00000498034 PREX1Q8TCU6 1659 aa32.38■■■□□ 2.77
LMBR1-219ENST00000498034 VPS8Q8N3P4 1428 aa32.38■■■□□ 2.77
LMBR1-219ENST00000498034 NCOA2Q15596 1464 aa32.36■■■□□ 2.77
LMBR1-219ENST00000498034 SUPT6HQ7KZ85 1726 aaKnown RBP32.36■■■□□ 2.77
LMBR1-219ENST00000498034 C3P01024 1663 aa32.36■■■□□ 2.77
LMBR1-219ENST00000498034 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
LMBR1-219ENST00000498034 A2MP01023 1474 aa32.31■■■□□ 2.76
LMBR1-219ENST00000498034 PLXNC1O60486 1568 aa32.29■■■□□ 2.76
LMBR1-219ENST00000498034 SETD1BQ9UPS6 1966 aaKnown RBP32.29■■■□□ 2.76
LMBR1-219ENST00000498034 UHRF1BP1Q6BDS2 1440 aa32.28■■■□□ 2.76
LMBR1-219ENST00000498034 CNTLNQ9NXG0 1405 aa32.28■■■□□ 2.76
LMBR1-219ENST00000498034 LRRC9Q6ZRR7 1453 aa32.26■■■□□ 2.75
LMBR1-219ENST00000498034 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
LMBR1-219ENST00000498034 ADGBQ8N7X0 1667 aa32.24■■■□□ 2.75
LMBR1-219ENST00000498034 RTEL1-TNFRSF6BF6WH68 1400 aa32.22■■■□□ 2.75
LMBR1-219ENST00000498034 GGT6Q6P531 493 aa32.21■■■□□ 2.75
LMBR1-219ENST00000498034 KANK4Q5T7N3 995 aaPredicted RBP32.2■■■□□ 2.75
LMBR1-219ENST00000498034 MROH2AA6NES4 1674 aa32.2■■■□□ 2.74
LMBR1-219ENST00000498034 ZMYM3Q14202 1370 aa32.19■■■□□ 2.74
LMBR1-219ENST00000498034 CCDC141Q6ZP82 1450 aa32.19■■■□□ 2.74
LMBR1-219ENST00000498034 FBXO41Q8TF61 875 aa32.18■■■□□ 2.74
LMBR1-219ENST00000498034 CLTCQ00610 1675 aaKnown RBP32.17■■■□□ 2.74
LMBR1-219ENST00000498034 MAP3K1Q13233 1512 aa32.16■■■□□ 2.74
LMBR1-219ENST00000498034 RSPH4AQ5TD94 716 aa32.15■■■□□ 2.74
LMBR1-219ENST00000498034 STRCQ7RTU9 1775 aa32.14■■■□□ 2.74
LMBR1-219ENST00000498034 DHX29Q7Z478 1369 aaKnown RBP32.13■■■□□ 2.73
LMBR1-219ENST00000498034 NPATQ14207 1427 aa32.1■■■□□ 2.73
LMBR1-219ENST00000498034 ARHGEF5Q12774 1597 aa32.1■■■□□ 2.73
LMBR1-219ENST00000498034 PPP6R1Q9UPN7 881 aa32.07■■■□□ 2.72
LMBR1-219ENST00000498034 TSPY4P0CV99 314 aa32.06■■■□□ 2.72
LMBR1-219ENST00000498034 TSPY10P0CW01 314 aa32.06■■■□□ 2.72
LMBR1-219ENST00000498034 DMRT2Q9Y5R5 561 aa32.06■■■□□ 2.72
LMBR1-219ENST00000498034 KIF3BO15066 747 aa32.05■■■□□ 2.72
LMBR1-219ENST00000498034 PTPRKQ15262 1439 aa32.03■■■□□ 2.72
LMBR1-219ENST00000498034 MYOM3Q5VTT5 1437 aa32.02■■■□□ 2.72
LMBR1-219ENST00000498034 CERKQ8TCT0 537 aa32.01■■■□□ 2.71
LMBR1-219ENST00000498034 APLP2Q06481 763 aa31.99■■■□□ 2.71
LMBR1-219ENST00000498034 MIA2Q96PC5 1412 aa31.99■■■□□ 2.71
LMBR1-219ENST00000498034 NCOA1Q15788 1441 aa31.96■■■□□ 2.71
LMBR1-219ENST00000498034 PTPRTO14522 1441 aa31.95■■■□□ 2.71
LMBR1-219ENST00000498034 CAMSAP1Q5T5Y3 1602 aa31.95■■■□□ 2.71
LMBR1-219ENST00000498034 MYO3AQ8NEV4 1616 aa31.95■■■□□ 2.71
LMBR1-219ENST00000498034 MAST1Q9Y2H9 1570 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms