RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 PHLDB1Q86UU1 1377 aa31.13■■■□□ 2.57
HLA-B-255ENST00000498007 AKNAQ7Z591 1439 aa31.12■■■□□ 2.57
HLA-B-255ENST00000498007 NCOA2Q15596 1464 aa31.08■■■□□ 2.57
HLA-B-255ENST00000498007 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
HLA-B-255ENST00000498007 ITSN2Q9NZM3 1697 aa31.07■■■□□ 2.56
HLA-B-255ENST00000498007 KANK4Q5T7N3 995 aaPredicted RBP31.07■■■□□ 2.56
HLA-B-255ENST00000498007 EFCAB2Q5VUJ9 269 aa31.07■■■□□ 2.56
HLA-B-255ENST00000498007 GPATCH8Q9UKJ3 1502 aaKnown RBP31.07■■■□□ 2.56
HLA-B-255ENST00000498007 ADGRL1O94910 1474 aa31.07■■■□□ 2.56
HLA-B-255ENST00000498007 FRMPD1Q5SYB0 1578 aa31.04■■■□□ 2.56
HLA-B-255ENST00000498007 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.56
HLA-B-255ENST00000498007 RICTORQ6R327 1708 aa31.01■■■□□ 2.56
HLA-B-255ENST00000498007 RAPGEF3O95398 923 aa30.99■■■□□ 2.55
HLA-B-255ENST00000498007 SCAPERQ9BY12 1400 aa30.98■■■□□ 2.55
HLA-B-255ENST00000498007 ABCC1P33527 1531 aa30.98■■■□□ 2.55
HLA-B-255ENST00000498007 SAMD9LQ8IVG5 1584 aa30.97■■■□□ 2.55
HLA-B-255ENST00000498007 CFDP1Q9UEE9 299 aaPredicted RBP30.95■■■□□ 2.55
HLA-B-255ENST00000498007 ZNF777Q9ULD5 760 aaPredicted RBP30.95■■■□□ 2.55
HLA-B-255ENST00000498007 POGZQ7Z3K3 1410 aa30.94■■■□□ 2.54
HLA-B-255ENST00000498007 SYCP2Q9BX26 1530 aa30.89■■■□□ 2.54
HLA-B-255ENST00000498007 ZMYM4Q5VZL5 1548 aa30.88■■■□□ 2.53
HLA-B-255ENST00000498007 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
HLA-B-255ENST00000498007 ZNF518AQ6AHZ1 1483 aa30.86■■■□□ 2.53
HLA-B-255ENST00000498007 PLEKHH2Q8IVE3 1493 aa30.84■■■□□ 2.53
HLA-B-255ENST00000498007 MYOM3Q5VTT5 1437 aa30.82■■■□□ 2.52
HLA-B-255ENST00000498007 KDM5CP41229 1560 aa30.82■■■□□ 2.52
HLA-B-255ENST00000498007 ARHGEF40Q8TER5 1519 aa30.82■■■□□ 2.52
HLA-B-255ENST00000498007 CAMSAP2Q08AD1 1489 aa30.82■■■□□ 2.52
HLA-B-255ENST00000498007 TRAPPC8Q9Y2L5 1435 aa30.81■■■□□ 2.52
HLA-B-255ENST00000498007 ZNF644Q9H582 1327 aaPredicted RBP30.8■■■□□ 2.52
HLA-B-255ENST00000498007 ZFYVE16Q7Z3T8 1539 aa30.79■■■□□ 2.52
HLA-B-255ENST00000498007 AFAP1Q8N556 730 aa30.78■■■□□ 2.52
HLA-B-255ENST00000498007 KIAA1107Q9UPP5 1409 aa30.78■■■□□ 2.52
HLA-B-255ENST00000498007 HECW2Q9P2P5 1572 aa30.78■■■□□ 2.52
HLA-B-255ENST00000498007 HNRNPMP52272 730 aaKnown RBP eCLIP30.77■■■□□ 2.52
HLA-B-255ENST00000498007 MAGI2Q86UL8 1455 aa30.75■■■□□ 2.51
HLA-B-255ENST00000498007 YEATS2Q9ULM3 1422 aa30.74■■■□□ 2.51
HLA-B-255ENST00000498007 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
HLA-B-255ENST00000498007 MIA2Q96PC5 1412 aa30.73■■■□□ 2.51
HLA-B-255ENST00000498007 MYT1LQ9UL68 1186 aa30.72■■■□□ 2.51
HLA-B-255ENST00000498007 PTPN23Q9H3S7 1636 aa30.69■■■□□ 2.5
HLA-B-255ENST00000498007 MBD5Q9P267 1494 aa30.69■■■□□ 2.5
HLA-B-255ENST00000498007 FGD6Q6ZV73 1430 aa30.68■■■□□ 2.5
HLA-B-255ENST00000498007 ABCA6Q8N139 1617 aa30.67■■■□□ 2.5
HLA-B-255ENST00000498007 MLH3Q9UHC1 1453 aa30.67■■■□□ 2.5
HLA-B-255ENST00000498007 KIDINS220Q9ULH0 1771 aa30.66■■■□□ 2.5
HLA-B-255ENST00000498007 CCDC141Q6ZP82 1450 aa30.65■■■□□ 2.5
HLA-B-255ENST00000498007 INO80Q9ULG1 1556 aaPredicted RBP30.65■■■□□ 2.5
HLA-B-255ENST00000498007 DIP2CQ9Y2E4 1556 aa30.65■■■□□ 2.5
HLA-B-255ENST00000498007 ARHGEF5Q12774 1597 aa30.64■■■□□ 2.5
HLA-B-255ENST00000498007 SPAG9O60271 1321 aaKnown RBP30.63■■■□□ 2.49
HLA-B-255ENST00000498007 ATP7AQ04656 1500 aa30.63■■■□□ 2.49
HLA-B-255ENST00000498007 SIGLEC1Q9BZZ2 1709 aa30.6■■■□□ 2.49
HLA-B-255ENST00000498007 ATP10AO60312 1499 aa30.59■■■□□ 2.49
HLA-B-255ENST00000498007 C9orf84Q5VXU9 1444 aa30.59■■■□□ 2.49
HLA-B-255ENST00000498007 TCOF1Q13428 1488 aaKnown RBP30.58■■■□□ 2.49
HLA-B-255ENST00000498007 ARID4BQ4LE39 1312 aaPredicted RBP30.56■■■□□ 2.48
HLA-B-255ENST00000498007 CROCC2H7BZ55 1655 aa30.53■■■□□ 2.48
HLA-B-255ENST00000498007 RSPH4AQ5TD94 716 aa30.52■■■□□ 2.48
HLA-B-255ENST00000498007 REREQ9P2R6 1566 aa30.51■■■□□ 2.47
HLA-B-255ENST00000498007 DNMT1P26358 1616 aaKnown RBP30.51■■■□□ 2.47
HLA-B-255ENST00000498007 BCORL1Q5H9F3 1711 aa30.5■■■□□ 2.47
HLA-B-255ENST00000498007 FAM50AQ14320 339 aaKnown RBP30.49■■■□□ 2.47
HLA-B-255ENST00000498007 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
HLA-B-255ENST00000498007 RTEL1-TNFRSF6BF6WH68 1400 aa30.48■■■□□ 2.47
HLA-B-255ENST00000498007 MAST1Q9Y2H9 1570 aa30.48■■■□□ 2.47
HLA-B-255ENST00000498007 KDM4FA0A1W2PPD8 638 aa30.47■■■□□ 2.47
HLA-B-255ENST00000498007 TSPY4P0CV99 314 aa30.47■■■□□ 2.47
HLA-B-255ENST00000498007 TSPY10P0CW01 314 aa30.47■■■□□ 2.47
HLA-B-255ENST00000498007 DAPK1P53355 1430 aa30.46■■■□□ 2.47
HLA-B-255ENST00000498007 ABCC5O15440 1437 aa30.45■■■□□ 2.46
HLA-B-255ENST00000498007 A2MP01023 1474 aa30.43■■■□□ 2.46
HLA-B-255ENST00000498007 SHANK2Q9UPX8 1470 aa30.43■■■□□ 2.46
HLA-B-255ENST00000498007 ADAMTSL3P82987 1691 aa30.42■■■□□ 2.46
HLA-B-255ENST00000498007 PLXNC1O60486 1568 aa30.41■■■□□ 2.46
HLA-B-255ENST00000498007 MLECQ14165 292 aa30.39■■■□□ 2.46
HLA-B-255ENST00000498007 MADDQ8WXG6 1647 aa30.39■■■□□ 2.46
HLA-B-255ENST00000498007 AGLP35573 1532 aa30.38■■■□□ 2.45
HLA-B-255ENST00000498007 FER1L4A9Z1Z3 1794 aa30.35■■■□□ 2.45
HLA-B-255ENST00000498007 RIMS1Q86UR5 1692 aaKnown RBP30.33■■■□□ 2.45
HLA-B-255ENST00000498007 RRBP1Q9P2E9 1410 aaKnown RBP30.32■■■□□ 2.44
HLA-B-255ENST00000498007 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
HLA-B-255ENST00000498007 DHX29Q7Z478 1369 aaKnown RBP30.29■■■□□ 2.44
HLA-B-255ENST00000498007 CHIC2Q9UKJ5 165 aa30.29■■■□□ 2.44
HLA-B-255ENST00000498007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.27■■■□□ 2.44
HLA-B-255ENST00000498007 KIF15Q9NS87 1388 aa30.26■■■□□ 2.43
HLA-B-255ENST00000498007 DUOX2Q9NRD8 1548 aa30.25■■■□□ 2.43
HLA-B-255ENST00000498007 ITGAEP38570 1179 aa30.24■■■□□ 2.43
HLA-B-255ENST00000498007 ANKRD30AQ9BXX3 1397 aa30.24■■■□□ 2.43
HLA-B-255ENST00000498007 RRP7BPQ9NSQ0 103 aa30.23■■■□□ 2.43
HLA-B-255ENST00000498007 ADGRL2O95490 1459 aa30.23■■■□□ 2.43
HLA-B-255ENST00000498007 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
HLA-B-255ENST00000498007 PTPRMP28827 1452 aa30.21■■■□□ 2.43
HLA-B-255ENST00000498007 EIF2AK4Q9P2K8 1649 aaKnown RBP30.21■■■□□ 2.43
HLA-B-255ENST00000498007 NCOA1Q15788 1441 aa30.19■■■□□ 2.42
HLA-B-255ENST00000498007 KIF3BO15066 747 aa30.18■■■□□ 2.42
HLA-B-255ENST00000498007 GGT6Q6P531 493 aa30.17■■■□□ 2.42
HLA-B-255ENST00000498007 ERBINQ96RT1 1412 aa30.15■■■□□ 2.42
HLA-B-255ENST00000498007 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.42
HLA-B-255ENST00000498007 CLTCQ00610 1675 aaKnown RBP30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms