RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-209ENST00000497816 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
IVD-209ENST00000497816 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.37
IVD-209ENST00000497816 POGZQ7Z3K3 1410 aa23.58■■□□□ 1.37
IVD-209ENST00000497816 SCAPERQ9BY12 1400 aa23.58■■□□□ 1.37
IVD-209ENST00000497816 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
IVD-209ENST00000497816 ADAMTSL3P82987 1691 aa23.56■■□□□ 1.36
IVD-209ENST00000497816 BCORL1Q5H9F3 1711 aa23.55■■□□□ 1.36
IVD-209ENST00000497816 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
IVD-209ENST00000497816 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
IVD-209ENST00000497816 SIGLEC1Q9BZZ2 1709 aa23.53■■□□□ 1.36
IVD-209ENST00000497816 YEATS2Q9ULM3 1422 aa23.51■■□□□ 1.35
IVD-209ENST00000497816 KDM5CP41229 1560 aa23.49■■□□□ 1.35
IVD-209ENST00000497816 LOC105371045A0A1W2PR82 267 aa23.49■■□□□ 1.35
IVD-209ENST00000497816 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
IVD-209ENST00000497816 ABCC1P33527 1531 aa23.48■■□□□ 1.35
IVD-209ENST00000497816 ZNF518AQ6AHZ1 1483 aa23.47■■□□□ 1.35
IVD-209ENST00000497816 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
IVD-209ENST00000497816 HECW2Q9P2P5 1572 aa23.43■■□□□ 1.34
IVD-209ENST00000497816 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
IVD-209ENST00000497816 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
IVD-209ENST00000497816 EHBP1L1Q8N3D4 1523 aa23.42■■□□□ 1.34
IVD-209ENST00000497816 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
IVD-209ENST00000497816 ARID4BQ4LE39 1312 aaPredicted RBP23.42■■□□□ 1.34
IVD-209ENST00000497816 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
IVD-209ENST00000497816 PTPRMP28827 1452 aa23.4■■□□□ 1.34
IVD-209ENST00000497816 ATP10AO60312 1499 aa23.39■■□□□ 1.34
IVD-209ENST00000497816 AFAP1Q8N556 730 aa23.39■■□□□ 1.34
IVD-209ENST00000497816 RIMS1Q86UR5 1692 aaKnown RBP23.39■■□□□ 1.33
IVD-209ENST00000497816 TRAPPC8Q9Y2L5 1435 aa23.38■■□□□ 1.33
IVD-209ENST00000497816 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
IVD-209ENST00000497816 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
IVD-209ENST00000497816 C9orf84Q5VXU9 1444 aa23.37■■□□□ 1.33
IVD-209ENST00000497816 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
IVD-209ENST00000497816 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
IVD-209ENST00000497816 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
IVD-209ENST00000497816 KIDINS220Q9ULH0 1771 aa23.35■■□□□ 1.33
IVD-209ENST00000497816 SYCP2Q9BX26 1530 aa23.35■■□□□ 1.33
IVD-209ENST00000497816 FER1L4A9Z1Z3 1794 aa23.34■■□□□ 1.33
IVD-209ENST00000497816 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
IVD-209ENST00000497816 REREQ9P2R6 1566 aa23.34■■□□□ 1.33
IVD-209ENST00000497816 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
IVD-209ENST00000497816 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
IVD-209ENST00000497816 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
IVD-209ENST00000497816 CFDP1Q9UEE9 299 aaPredicted RBP23.28■■□□□ 1.32
IVD-209ENST00000497816 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
IVD-209ENST00000497816 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
IVD-209ENST00000497816 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
IVD-209ENST00000497816 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
IVD-209ENST00000497816 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
IVD-209ENST00000497816 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
IVD-209ENST00000497816 MLECQ14165 292 aa23.23■■□□□ 1.31
IVD-209ENST00000497816 AGLP35573 1532 aa23.23■■□□□ 1.31
IVD-209ENST00000497816 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
IVD-209ENST00000497816 ATP7AQ04656 1500 aa23.21■■□□□ 1.31
IVD-209ENST00000497816 ZNF644Q9H582 1327 aaPredicted RBP23.19■■□□□ 1.3
IVD-209ENST00000497816 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
IVD-209ENST00000497816 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
IVD-209ENST00000497816 LMTK3Q96Q04 1460 aa23.15■■□□□ 1.3
IVD-209ENST00000497816 PLXNC1O60486 1568 aa23.15■■□□□ 1.3
IVD-209ENST00000497816 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.3
IVD-209ENST00000497816 ADGBQ8N7X0 1667 aa23.14■■□□□ 1.29
IVD-209ENST00000497816 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
IVD-209ENST00000497816 C3P01024 1663 aa23.11■■□□□ 1.29
IVD-209ENST00000497816 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
IVD-209ENST00000497816 A2MP01023 1474 aa23.08■■□□□ 1.29
IVD-209ENST00000497816 CCDC141Q6ZP82 1450 aa23.08■■□□□ 1.29
IVD-209ENST00000497816 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
IVD-209ENST00000497816 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
IVD-209ENST00000497816 RTEL1-TNFRSF6BF6WH68 1400 aa23.07■■□□□ 1.28
IVD-209ENST00000497816 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
IVD-209ENST00000497816 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
IVD-209ENST00000497816 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
IVD-209ENST00000497816 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
IVD-209ENST00000497816 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
IVD-209ENST00000497816 MIA2Q96PC5 1412 aa23■■□□□ 1.27
IVD-209ENST00000497816 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
IVD-209ENST00000497816 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
IVD-209ENST00000497816 MAST1Q9Y2H9 1570 aa22.98■■□□□ 1.27
IVD-209ENST00000497816 APLP2Q06481 763 aa22.97■■□□□ 1.27
IVD-209ENST00000497816 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
IVD-209ENST00000497816 HSPA2P54652 639 aa22.96■■□□□ 1.27
IVD-209ENST00000497816 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
IVD-209ENST00000497816 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
IVD-209ENST00000497816 CROCC2H7BZ55 1655 aa22.92■■□□□ 1.26
IVD-209ENST00000497816 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
IVD-209ENST00000497816 ZMYM3Q14202 1370 aa22.89■■□□□ 1.26
IVD-209ENST00000497816 TSPY4P0CV99 314 aa22.89■■□□□ 1.26
IVD-209ENST00000497816 TSPY10P0CW01 314 aa22.89■■□□□ 1.26
IVD-209ENST00000497816 GGT6Q6P531 493 aa22.89■■□□□ 1.26
IVD-209ENST00000497816 NPATQ14207 1427 aa22.88■■□□□ 1.25
IVD-209ENST00000497816 STRCQ7RTU9 1775 aa22.88■■□□□ 1.25
IVD-209ENST00000497816 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
IVD-209ENST00000497816 FGD6Q6ZV73 1430 aa22.86■■□□□ 1.25
IVD-209ENST00000497816 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
IVD-209ENST00000497816 FAM135AQ9P2D6 1515 aa22.85■■□□□ 1.25
IVD-209ENST00000497816 DNMT1P26358 1616 aaKnown RBP22.85■■□□□ 1.25
IVD-209ENST00000497816 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
IVD-209ENST00000497816 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
IVD-209ENST00000497816 KIF3BO15066 747 aa22.83■■□□□ 1.25
IVD-209ENST00000497816 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms