RNA–Protein interactions for RNA: ENST00000497707.5

COMMD6-212, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-212ENST00000497707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.26
COMMD6-212ENST00000497707 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
COMMD6-212ENST00000497707 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
COMMD6-212ENST00000497707 ASXL2Q76L83 1435 aa16.66■□□□□ 0.26
COMMD6-212ENST00000497707 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
COMMD6-212ENST00000497707 ITGAEP38570 1179 aa16.64■□□□□ 0.25
COMMD6-212ENST00000497707 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
COMMD6-212ENST00000497707 CDC42BPBQ9Y5S2 1711 aa16.64■□□□□ 0.25
COMMD6-212ENST00000497707 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD6-212ENST00000497707 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
COMMD6-212ENST00000497707 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
COMMD6-212ENST00000497707 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
COMMD6-212ENST00000497707 PLCH2O75038 1416 aa16.58■□□□□ 0.24
COMMD6-212ENST00000497707 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
COMMD6-212ENST00000497707 ABCC5O15440 1437 aa16.57■□□□□ 0.24
COMMD6-212ENST00000497707 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
COMMD6-212ENST00000497707 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
COMMD6-212ENST00000497707 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
COMMD6-212ENST00000497707 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
COMMD6-212ENST00000497707 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
COMMD6-212ENST00000497707 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
COMMD6-212ENST00000497707 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
COMMD6-212ENST00000497707 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
COMMD6-212ENST00000497707 DAPK1P53355 1430 aa16.53■□□□□ 0.24
COMMD6-212ENST00000497707 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
COMMD6-212ENST00000497707 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
COMMD6-212ENST00000497707 ARHGEF12Q9NZN5 1544 aa16.5■□□□□ 0.23
COMMD6-212ENST00000497707 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
COMMD6-212ENST00000497707 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
COMMD6-212ENST00000497707 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
COMMD6-212ENST00000497707 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
COMMD6-212ENST00000497707 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
COMMD6-212ENST00000497707 AKNAQ7Z591 1439 aa16.48■□□□□ 0.23
COMMD6-212ENST00000497707 NAIPQ13075 1403 aa16.47■□□□□ 0.23
COMMD6-212ENST00000497707 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
COMMD6-212ENST00000497707 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
COMMD6-212ENST00000497707 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
COMMD6-212ENST00000497707 KIAA1107Q9UPP5 1409 aa16.46■□□□□ 0.23
COMMD6-212ENST00000497707 HRCP23327 699 aa16.46■□□□□ 0.23
COMMD6-212ENST00000497707 GLI2P10070 1586 aa16.46■□□□□ 0.23
COMMD6-212ENST00000497707 HFM1A2PYH4 1435 aa16.45■□□□□ 0.22
COMMD6-212ENST00000497707 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
COMMD6-212ENST00000497707 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
COMMD6-212ENST00000497707 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
COMMD6-212ENST00000497707 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
COMMD6-212ENST00000497707 KDM6BO15054 1643 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 ABCC1P33527 1531 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 FANCAO15360 1455 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
COMMD6-212ENST00000497707 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
COMMD6-212ENST00000497707 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
COMMD6-212ENST00000497707 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
COMMD6-212ENST00000497707 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
COMMD6-212ENST00000497707 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
COMMD6-212ENST00000497707 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
COMMD6-212ENST00000497707 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
COMMD6-212ENST00000497707 GCC2Q8IWJ2 1684 aa16.39■□□□□ 0.21
COMMD6-212ENST00000497707 ADGBQ8N7X0 1667 aa16.38■□□□□ 0.21
COMMD6-212ENST00000497707 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
COMMD6-212ENST00000497707 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 MAST1Q9Y2H9 1570 aa16.37■□□□□ 0.21
COMMD6-212ENST00000497707 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
COMMD6-212ENST00000497707 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
COMMD6-212ENST00000497707 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
COMMD6-212ENST00000497707 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
COMMD6-212ENST00000497707 NEO1Q92859 1461 aa16.31■□□□□ 0.2
COMMD6-212ENST00000497707 TSPOAP1O95153 1857 aa16.3■□□□□ 0.2
COMMD6-212ENST00000497707 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
COMMD6-212ENST00000497707 CFAP74Q9C0B2 1584 aa16.29■□□□□ 0.2
COMMD6-212ENST00000497707 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
COMMD6-212ENST00000497707 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
COMMD6-212ENST00000497707 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
COMMD6-212ENST00000497707 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
COMMD6-212ENST00000497707 KIF15Q9NS87 1388 aa16.27■□□□□ 0.2
COMMD6-212ENST00000497707 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.2
COMMD6-212ENST00000497707 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
COMMD6-212ENST00000497707 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
COMMD6-212ENST00000497707 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
COMMD6-212ENST00000497707 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
COMMD6-212ENST00000497707 INO80Q9ULG1 1556 aaPredicted RBP16.25■□□□□ 0.19
COMMD6-212ENST00000497707 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
COMMD6-212ENST00000497707 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
COMMD6-212ENST00000497707 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
COMMD6-212ENST00000497707 KDM5CP41229 1560 aa16.24■□□□□ 0.19
COMMD6-212ENST00000497707 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
COMMD6-212ENST00000497707 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
COMMD6-212ENST00000497707 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
COMMD6-212ENST00000497707 MPHOSPH9Q99550 1183 aa16.22■□□□□ 0.19
COMMD6-212ENST00000497707 ATP7AQ04656 1500 aa16.22■□□□□ 0.19
COMMD6-212ENST00000497707 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
COMMD6-212ENST00000497707 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.19
COMMD6-212ENST00000497707 PZPP20742 1482 aa16.21■□□□□ 0.19
COMMD6-212ENST00000497707 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms