RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 TTBK1Q5TCY1 1321 aaPredicted RBP8.28□□□□□ -1.08
PHC3-217ENST00000497658 KIF21BO75037 1637 aa8.27□□□□□ -1.09
PHC3-217ENST00000497658 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
PHC3-217ENST00000497658 EMP3P54852 163 aa8.26□□□□□ -1.09
PHC3-217ENST00000497658 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
PHC3-217ENST00000497658 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
PHC3-217ENST00000497658 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
PHC3-217ENST00000497658 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
PHC3-217ENST00000497658 CLIP1P30622 1438 aa8.25□□□□□ -1.09
PHC3-217ENST00000497658 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
PHC3-217ENST00000497658 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
PHC3-217ENST00000497658 RUSC2Q8N2Y8 1516 aa8.25□□□□□ -1.09
PHC3-217ENST00000497658 C3orf67Q6ZVT6 689 aa8.24□□□□□ -1.09
PHC3-217ENST00000497658 L3MBTL3Q96JM7 780 aaPredicted RBP8.24□□□□□ -1.09
PHC3-217ENST00000497658 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
PHC3-217ENST00000497658 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
PHC3-217ENST00000497658 FAM205CA6NFA0 338 aa8.21□□□□□ -1.1
PHC3-217ENST00000497658 MKRN3Q13064 507 aaKnown RBP8.2□□□□□ -1.1
PHC3-217ENST00000497658 PEG3Q9GZU2 1588 aa8.18□□□□□ -1.1
PHC3-217ENST00000497658 GOLGA2Q08379 1002 aa8.18□□□□□ -1.1
PHC3-217ENST00000497658 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
PHC3-217ENST00000497658 DHX57Q6P158 1386 aaKnown RBP8.18□□□□□ -1.1
PHC3-217ENST00000497658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.17□□□□□ -1.13e-7■■□□□ 11.7
PHC3-217ENST00000497658 ANP32EQ9BTT0 268 aa8.16□□□□□ -1.1
PHC3-217ENST00000497658 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
PHC3-217ENST00000497658 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
PHC3-217ENST00000497658 CUX2O14529 1486 aa8.14□□□□□ -1.11
PHC3-217ENST00000497658 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
PHC3-217ENST00000497658 RAPGEF2Q9Y4G8 1499 aa8.13□□□□□ -1.11
PHC3-217ENST00000497658 GSE1Q14687 1217 aa8.13□□□□□ -1.11
PHC3-217ENST00000497658 CHRM1P11229 460 aaPredicted RBP8.12□□□□□ -1.11
PHC3-217ENST00000497658 ERICH3Q5RHP9 1530 aa8.12□□□□□ -1.11
PHC3-217ENST00000497658 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
PHC3-217ENST00000497658 PSEN1P49768 467 aa8.12□□□□□ -1.11
PHC3-217ENST00000497658 FKBP8Q14318 412 aa8.12□□□□□ -1.11
PHC3-217ENST00000497658 HOXB3P14651 431 aaPredicted RBP8.1□□□□□ -1.11
PHC3-217ENST00000497658 UNC13AQ9UPW8 1703 aa8.09□□□□□ -1.11
PHC3-217ENST00000497658 DPY19L2Q6NUT2 758 aa8.09□□□□□ -1.11
PHC3-217ENST00000497658 TOP2BQ02880 1626 aa8.08□□□□□ -1.12
PHC3-217ENST00000497658 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
PHC3-217ENST00000497658 FBXO3Q9UK99 471 aa8.08□□□□□ -1.12
PHC3-217ENST00000497658 PRXQ9BXM0 1461 aa8.07□□□□□ -1.12
PHC3-217ENST00000497658 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
PHC3-217ENST00000497658 TIMELESSQ9UNS1 1208 aa8.06□□□□□ -1.12
PHC3-217ENST00000497658 ARAP1Q96P48 1450 aa8.05□□□□□ -1.12
PHC3-217ENST00000497658 CCNB3Q8WWL7 1395 aa8.05□□□□□ -1.12
PHC3-217ENST00000497658 PDAP1Q13442 181 aaKnown RBP8.04□□□□□ -1.12
PHC3-217ENST00000497658 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
PHC3-217ENST00000497658 RNF166Q96A37 237 aaPredicted RBP8.04□□□□□ -1.12
PHC3-217ENST00000497658 ERBB3P21860 1342 aa8.04□□□□□ -1.12
PHC3-217ENST00000497658 G3V3G9 751 aa8.04□□□□□ -1.12
PHC3-217ENST00000497658 KLHL34Q8N239 644 aa8.04□□□□□ -1.12
PHC3-217ENST00000497658 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
PHC3-217ENST00000497658 ATAD2BQ9ULI0 1458 aa8.03□□□□□ -1.12
PHC3-217ENST00000497658 DOK7Q18PE1 504 aa8.02□□□□□ -1.12
PHC3-217ENST00000497658 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.12
PHC3-217ENST00000497658 MAP3K1Q13233 1512 aa8.02□□□□□ -1.13
PHC3-217ENST00000497658 CCER2I3L3R5 266 aa8.01□□□□□ -1.13
PHC3-217ENST00000497658 NEFLP07196 543 aa8.01□□□□□ -1.13
PHC3-217ENST00000497658 CABP2Q9NPB3 220 aa8.01□□□□□ -1.13
PHC3-217ENST00000497658 BICRAQ9NZM4 1560 aa8.01□□□□□ -1.13
PHC3-217ENST00000497658 BCL11AQ9H165 835 aa8.01□□□□□ -1.13
PHC3-217ENST00000497658 MAPKBP1O60336 1514 aa7.99□□□□□ -1.13
PHC3-217ENST00000497658 RAB3GAP2Q9H2M9 1393 aa7.99□□□□□ -1.13
PHC3-217ENST00000497658 VASPP50552 380 aaPredicted RBP7.99□□□□□ -1.13
PHC3-217ENST00000497658 KIF27Q86VH2 1401 aa7.98□□□□□ -1.13
PHC3-217ENST00000497658 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
PHC3-217ENST00000497658 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
PHC3-217ENST00000497658 RANGAP1P46060 587 aaPredicted RBP7.98□□□□□ -1.13
PHC3-217ENST00000497658 VARS2Q5ST30 1063 aaKnown RBP7.98□□□□□ -1.13
PHC3-217ENST00000497658 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
PHC3-217ENST00000497658 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
PHC3-217ENST00000497658 PPP1R15AO75807 674 aaPredicted RBP7.96□□□□□ -1.13
PHC3-217ENST00000497658 ARHGAP35Q9NRY4 1499 aa7.96□□□□□ -1.13
PHC3-217ENST00000497658 KCNH8Q96L42 1107 aa7.96□□□□□ -1.14
PHC3-217ENST00000497658 ZNF687Q8N1G0 1237 aa7.95□□□□□ -1.14
PHC3-217ENST00000497658 ANP32CO43423 234 aa7.94□□□□□ -1.14
PHC3-217ENST00000497658 DDX10Q13206 875 aaKnown RBP7.94□□□□□ -1.14
PHC3-217ENST00000497658 ZSWIM6Q9HCJ5 1215 aa7.94□□□□□ -1.14
PHC3-217ENST00000497658 TIAM1Q13009 1591 aa7.93□□□□□ -1.14
PHC3-217ENST00000497658 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
PHC3-217ENST00000497658 ERICH6BQ5W0A0 696 aa7.93□□□□□ -1.14
PHC3-217ENST00000497658 BCANQ96GW7 911 aa7.93□□□□□ -1.14
PHC3-217ENST00000497658 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
PHC3-217ENST00000497658 PTGER2P43116 358 aa7.92□□□□□ -1.14
PHC3-217ENST00000497658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.92□□□□□ -1.14
PHC3-217ENST00000497658 LRRC9Q6ZRR7 1453 aa7.91□□□□□ -1.14
PHC3-217ENST00000497658 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
PHC3-217ENST00000497658 ITGAEP38570 1179 aa7.9□□□□□ -1.14
PHC3-217ENST00000497658 GPR153Q6NV75 609 aa7.9□□□□□ -1.14
PHC3-217ENST00000497658 CUX1P39880 1505 aa7.9□□□□□ -1.14
PHC3-217ENST00000497658 TMEM92Q6UXU6 159 aa7.9□□□□□ -1.15
PHC3-217ENST00000497658 HMGXB3Q12766 1538 aa7.89□□□□□ -1.15
PHC3-217ENST00000497658 EFCAB3Q8N7B9 438 aa7.88□□□□□ -1.15
PHC3-217ENST00000497658 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
PHC3-217ENST00000497658 CDK11AQ9UQ88 783 aaPredicted RBP7.88□□□□□ -1.15
PHC3-217ENST00000497658 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 MICALL2Q8IY33 904 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 SPOCK2Q92563 424 aa7.87□□□□□ -1.15
PHC3-217ENST00000497658 TRIM52Q96A61 297 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms