RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
PBX3-211ENST00000497091 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
PBX3-211ENST00000497091 ARHGAP5Q13017 1502 aa29.8■■■□□ 2.36
PBX3-211ENST00000497091 GPATCH8Q9UKJ3 1502 aaKnown RBP29.79■■■□□ 2.36
PBX3-211ENST00000497091 ZNF777Q9ULD5 760 aaPredicted RBP29.78■■■□□ 2.36
PBX3-211ENST00000497091 MYO5CQ9NQX4 1742 aa29.78■■■□□ 2.36
PBX3-211ENST00000497091 CFAP74Q9C0B2 1584 aa29.77■■■□□ 2.36
PBX3-211ENST00000497091 DENND4BO75064 1496 aaPredicted RBP29.76■■■□□ 2.35
PBX3-211ENST00000497091 SCAPERQ9BY12 1400 aa29.76■■■□□ 2.35
PBX3-211ENST00000497091 ADGRL1O94910 1474 aa29.74■■■□□ 2.35
PBX3-211ENST00000497091 NCOA2Q15596 1464 aa29.74■■■□□ 2.35
PBX3-211ENST00000497091 PREX2Q70Z35 1606 aa29.68■■■□□ 2.34
PBX3-211ENST00000497091 SUPT6HQ7KZ85 1726 aaKnown RBP29.68■■■□□ 2.34
PBX3-211ENST00000497091 CDC42BPBQ9Y5S2 1711 aa29.68■■■□□ 2.34
PBX3-211ENST00000497091 CDC42BPAQ5VT25 1732 aa29.65■■■□□ 2.34
PBX3-211ENST00000497091 AFAP1Q8N556 730 aa29.65■■■□□ 2.34
PBX3-211ENST00000497091 HNRNPMP52272 730 aaKnown RBP eCLIP29.63■■■□□ 2.33
PBX3-211ENST00000497091 ZNF644Q9H582 1327 aaPredicted RBP29.62■■■□□ 2.33
PBX3-211ENST00000497091 POGZQ7Z3K3 1410 aa29.61■■■□□ 2.33
PBX3-211ENST00000497091 MYT1LQ9UL68 1186 aa29.58■■■□□ 2.33
PBX3-211ENST00000497091 PLEKHH2Q8IVE3 1493 aa29.57■■■□□ 2.32
PBX3-211ENST00000497091 FRMPD1Q5SYB0 1578 aa29.56■■■□□ 2.32
PBX3-211ENST00000497091 ARHGEF12Q9NZN5 1544 aa29.56■■■□□ 2.32
PBX3-211ENST00000497091 KIAA1107Q9UPP5 1409 aa29.56■■■□□ 2.32
PBX3-211ENST00000497091 ZNF518AQ6AHZ1 1483 aa29.55■■■□□ 2.32
PBX3-211ENST00000497091 TRAPPC8Q9Y2L5 1435 aa29.54■■■□□ 2.32
PBX3-211ENST00000497091 ABCC1P33527 1531 aa29.54■■■□□ 2.32
PBX3-211ENST00000497091 SAMD9LQ8IVG5 1584 aa29.53■■■□□ 2.32
PBX3-211ENST00000497091 RICTORQ6R327 1708 aa29.53■■■□□ 2.32
PBX3-211ENST00000497091 ITSN2Q9NZM3 1697 aa29.53■■■□□ 2.32
PBX3-211ENST00000497091 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
PBX3-211ENST00000497091 MAGI2Q86UL8 1455 aa29.52■■■□□ 2.32
PBX3-211ENST00000497091 MYOM3Q5VTT5 1437 aa29.52■■■□□ 2.32
PBX3-211ENST00000497091 MIA2Q96PC5 1412 aa29.49■■■□□ 2.31
PBX3-211ENST00000497091 RSPH4AQ5TD94 716 aa29.49■■■□□ 2.31
PBX3-211ENST00000497091 ZMYM4Q5VZL5 1548 aa29.48■■■□□ 2.31
PBX3-211ENST00000497091 SPAG9O60271 1321 aaKnown RBP29.46■■■□□ 2.31
PBX3-211ENST00000497091 SYCP2Q9BX26 1530 aa29.46■■■□□ 2.31
PBX3-211ENST00000497091 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
PBX3-211ENST00000497091 ARID4BQ4LE39 1312 aaPredicted RBP29.43■■■□□ 2.3
PBX3-211ENST00000497091 CAMSAP2Q08AD1 1489 aa29.42■■■□□ 2.3
PBX3-211ENST00000497091 MBD5Q9P267 1494 aa29.42■■■□□ 2.3
PBX3-211ENST00000497091 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
PBX3-211ENST00000497091 ZFYVE16Q7Z3T8 1539 aa29.42■■■□□ 2.3
PBX3-211ENST00000497091 KDM5CP41229 1560 aa29.42■■■□□ 2.3
PBX3-211ENST00000497091 TSPY4P0CV99 314 aa29.39■■■□□ 2.3
PBX3-211ENST00000497091 TSPY10P0CW01 314 aa29.39■■■□□ 2.3
PBX3-211ENST00000497091 ATP10AO60312 1499 aa29.38■■■□□ 2.29
PBX3-211ENST00000497091 FGD6Q6ZV73 1430 aa29.37■■■□□ 2.29
PBX3-211ENST00000497091 ARHGEF40Q8TER5 1519 aa29.35■■■□□ 2.29
PBX3-211ENST00000497091 HECW2Q9P2P5 1572 aa29.33■■■□□ 2.29
PBX3-211ENST00000497091 CCDC141Q6ZP82 1450 aa29.32■■■□□ 2.28
PBX3-211ENST00000497091 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
PBX3-211ENST00000497091 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
PBX3-211ENST00000497091 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
PBX3-211ENST00000497091 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
PBX3-211ENST00000497091 ARHGEF5Q12774 1597 aa29.26■■■□□ 2.28
PBX3-211ENST00000497091 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
PBX3-211ENST00000497091 MLECQ14165 292 aa29.25■■■□□ 2.27
PBX3-211ENST00000497091 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
PBX3-211ENST00000497091 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
PBX3-211ENST00000497091 DIP2CQ9Y2E4 1556 aa29.23■■■□□ 2.27
PBX3-211ENST00000497091 ABCA6Q8N139 1617 aa29.2■■■□□ 2.26
PBX3-211ENST00000497091 ABCC5O15440 1437 aa29.2■■■□□ 2.26
PBX3-211ENST00000497091 INO80Q9ULG1 1556 aaPredicted RBP29.18■■■□□ 2.26
PBX3-211ENST00000497091 A2MP01023 1474 aa29.16■■■□□ 2.26
PBX3-211ENST00000497091 DAPK1P53355 1430 aa29.15■■■□□ 2.26
PBX3-211ENST00000497091 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
PBX3-211ENST00000497091 CHIC2Q9UKJ5 165 aa29.14■■■□□ 2.26
PBX3-211ENST00000497091 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
PBX3-211ENST00000497091 AGLP35573 1532 aa29.1■■■□□ 2.25
PBX3-211ENST00000497091 RRP7BPQ9NSQ0 103 aa29.1■■■□□ 2.25
PBX3-211ENST00000497091 SIGLEC1Q9BZZ2 1709 aa29.09■■■□□ 2.25
PBX3-211ENST00000497091 BCORL1Q5H9F3 1711 aa29.08■■■□□ 2.25
PBX3-211ENST00000497091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.08■■■□□ 2.25
PBX3-211ENST00000497091 MAST1Q9Y2H9 1570 aa29.08■■■□□ 2.25
PBX3-211ENST00000497091 GGT6Q6P531 493 aa29.07■■■□□ 2.24
PBX3-211ENST00000497091 ESF1Q9H501 851 aaKnown RBP29.07■■■□□ 2.24
PBX3-211ENST00000497091 DNMT1P26358 1616 aaKnown RBP29.06■■■□□ 2.24
PBX3-211ENST00000497091 SHANK2Q9UPX8 1470 aa29.06■■■□□ 2.24
PBX3-211ENST00000497091 KIF3BO15066 747 aa29.06■■■□□ 2.24
PBX3-211ENST00000497091 ITGAEP38570 1179 aa29.06■■■□□ 2.24
PBX3-211ENST00000497091 ADAMTSL3P82987 1691 aa29.05■■■□□ 2.24
PBX3-211ENST00000497091 ANKRD30AQ9BXX3 1397 aa29.04■■■□□ 2.24
PBX3-211ENST00000497091 ADGBQ8N7X0 1667 aa29.03■■■□□ 2.24
PBX3-211ENST00000497091 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
PBX3-211ENST00000497091 KIF15Q9NS87 1388 aa29.01■■■□□ 2.24
PBX3-211ENST00000497091 PLXNC1O60486 1568 aa29.01■■■□□ 2.23
PBX3-211ENST00000497091 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
PBX3-211ENST00000497091 NCOA1Q15788 1441 aa28.99■■■□□ 2.23
PBX3-211ENST00000497091 ILDR1Q86SU0 546 aaPredicted RBP28.98■■■□□ 2.23
PBX3-211ENST00000497091 PLPPR3Q6T4P5 718 aa28.97■■■□□ 2.23
PBX3-211ENST00000497091 MADDQ8WXG6 1647 aa28.97■■■□□ 2.23
PBX3-211ENST00000497091 PTPRMP28827 1452 aa28.97■■■□□ 2.23
PBX3-211ENST00000497091 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
PBX3-211ENST00000497091 CROCC2H7BZ55 1655 aa28.94■■■□□ 2.22
PBX3-211ENST00000497091 DUOX2Q9NRD8 1548 aa28.94■■■□□ 2.22
PBX3-211ENST00000497091 ADGRL2O95490 1459 aa28.91■■■□□ 2.22
PBX3-211ENST00000497091 CEBPAP49715 358 aaPredicted RBP28.9■■■□□ 2.22
PBX3-211ENST00000497091 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms