RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
SRRM1-220ENST00000496882 FANCAO15360 1455 aa12.67□□□□□ -0.38
SRRM1-220ENST00000496882 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
SRRM1-220ENST00000496882 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-220ENST00000496882 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
SRRM1-220ENST00000496882 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
SRRM1-220ENST00000496882 KIF14Q15058 1648 aa12.64□□□□□ -0.39
SRRM1-220ENST00000496882 CCDC18Q5T9S5 1454 aa12.64□□□□□ -0.39
SRRM1-220ENST00000496882 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-220ENST00000496882 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
SRRM1-220ENST00000496882 PLCH2O75038 1416 aa12.62□□□□□ -0.39
SRRM1-220ENST00000496882 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
SRRM1-220ENST00000496882 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
SRRM1-220ENST00000496882 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
SRRM1-220ENST00000496882 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
SRRM1-220ENST00000496882 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
SRRM1-220ENST00000496882 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
SRRM1-220ENST00000496882 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
SRRM1-220ENST00000496882 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
SRRM1-220ENST00000496882 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
SRRM1-220ENST00000496882 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
SRRM1-220ENST00000496882 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
SRRM1-220ENST00000496882 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
SRRM1-220ENST00000496882 POGZQ7Z3K3 1410 aa12.56□□□□□ -0.4
SRRM1-220ENST00000496882 MAGI2Q86UL8 1455 aa12.56□□□□□ -0.4
SRRM1-220ENST00000496882 ZMYM4Q5VZL5 1548 aa12.56□□□□□ -0.4
SRRM1-220ENST00000496882 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
SRRM1-220ENST00000496882 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
SRRM1-220ENST00000496882 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
SRRM1-220ENST00000496882 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
SRRM1-220ENST00000496882 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
SRRM1-220ENST00000496882 BCORL1Q5H9F3 1711 aa12.52□□□□□ -0.41
SRRM1-220ENST00000496882 YEATS2Q9ULM3 1422 aa12.52□□□□□ -0.41
SRRM1-220ENST00000496882 MTUS2Q5JR59 1369 aa12.51□□□□□ -0.41
SRRM1-220ENST00000496882 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
SRRM1-220ENST00000496882 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
SRRM1-220ENST00000496882 PTPRMP28827 1452 aa12.5□□□□□ -0.41
SRRM1-220ENST00000496882 HECW2Q9P2P5 1572 aa12.5□□□□□ -0.41
SRRM1-220ENST00000496882 PREX2Q70Z35 1606 aa12.5□□□□□ -0.41
SRRM1-220ENST00000496882 ATP10AO60312 1499 aa12.49□□□□□ -0.41
SRRM1-220ENST00000496882 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
SRRM1-220ENST00000496882 MLECQ14165 292 aa12.49□□□□□ -0.41
SRRM1-220ENST00000496882 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
SRRM1-220ENST00000496882 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
SRRM1-220ENST00000496882 ZNF777Q9ULD5 760 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-220ENST00000496882 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
SRRM1-220ENST00000496882 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
SRRM1-220ENST00000496882 KDM5CP41229 1560 aa12.46□□□□□ -0.42
SRRM1-220ENST00000496882 ABCC1P33527 1531 aa12.46□□□□□ -0.42
SRRM1-220ENST00000496882 RIMS1Q86UR5 1692 aaKnown RBP12.45□□□□□ -0.42
SRRM1-220ENST00000496882 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-220ENST00000496882 EHBP1L1Q8N3D4 1523 aa12.44□□□□□ -0.42
SRRM1-220ENST00000496882 CDC42BPAQ5VT25 1732 aa12.44□□□□□ -0.42
SRRM1-220ENST00000496882 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
SRRM1-220ENST00000496882 ITSN2Q9NZM3 1697 aa12.43□□□□□ -0.42
SRRM1-220ENST00000496882 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
SRRM1-220ENST00000496882 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
SRRM1-220ENST00000496882 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
SRRM1-220ENST00000496882 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
SRRM1-220ENST00000496882 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-220ENST00000496882 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
SRRM1-220ENST00000496882 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
SRRM1-220ENST00000496882 SPAG9O60271 1321 aaKnown RBP12.4□□□□□ -0.42
SRRM1-220ENST00000496882 DIP2CQ9Y2E4 1556 aa12.4□□□□□ -0.42
SRRM1-220ENST00000496882 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.421e-9■■■■■ 32.3
SRRM1-220ENST00000496882 SYCP2Q9BX26 1530 aa12.4□□□□□ -0.42
SRRM1-220ENST00000496882 ARHGEF12Q9NZN5 1544 aa12.4□□□□□ -0.42
SRRM1-220ENST00000496882 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
SRRM1-220ENST00000496882 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
SRRM1-220ENST00000496882 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
SRRM1-220ENST00000496882 KIAA1107Q9UPP5 1409 aa12.38□□□□□ -0.43
SRRM1-220ENST00000496882 ABCA6Q8N139 1617 aa12.38□□□□□ -0.43
SRRM1-220ENST00000496882 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
SRRM1-220ENST00000496882 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
SRRM1-220ENST00000496882 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
SRRM1-220ENST00000496882 SUPT6HQ7KZ85 1726 aaKnown RBP12.36□□□□□ -0.43
SRRM1-220ENST00000496882 AGLP35573 1532 aa12.36□□□□□ -0.43
SRRM1-220ENST00000496882 APLP2Q06481 763 aa12.35□□□□□ -0.43
SRRM1-220ENST00000496882 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
SRRM1-220ENST00000496882 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
SRRM1-220ENST00000496882 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
SRRM1-220ENST00000496882 FKBP8Q14318 412 aa12.34□□□□□ -0.43
SRRM1-220ENST00000496882 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
SRRM1-220ENST00000496882 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
SRRM1-220ENST00000496882 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
SRRM1-220ENST00000496882 ZNF644Q9H582 1327 aaPredicted RBP12.32□□□□□ -0.44
SRRM1-220ENST00000496882 HSPA2P54652 639 aa12.31□□□□□ -0.44
SRRM1-220ENST00000496882 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
SRRM1-220ENST00000496882 A2MP01023 1474 aa12.31□□□□□ -0.44
SRRM1-220ENST00000496882 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
SRRM1-220ENST00000496882 UHRF1BP1Q6BDS2 1440 aa12.3□□□□□ -0.44
SRRM1-220ENST00000496882 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
SRRM1-220ENST00000496882 CAMSAP2Q08AD1 1489 aa12.29□□□□□ -0.44
SRRM1-220ENST00000496882 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
SRRM1-220ENST00000496882 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
SRRM1-220ENST00000496882 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
SRRM1-220ENST00000496882 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
SRRM1-220ENST00000496882 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
SRRM1-220ENST00000496882 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
SRRM1-220ENST00000496882 GGT6Q6P531 493 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms