RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 ATP1B4Q9UN42 357 aaPredicted RBP26.58■■□□□ 1.85
ABCB1-209ENST00000496821 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
ABCB1-209ENST00000496821 LRRIQ1Q96JM4 1722 aa26.56■■□□□ 1.84
ABCB1-209ENST00000496821 MYO5CQ9NQX4 1742 aa26.56■■□□□ 1.84
ABCB1-209ENST00000496821 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
ABCB1-209ENST00000496821 RIMS1Q86UR5 1692 aaKnown RBP26.53■■□□□ 1.84
ABCB1-209ENST00000496821 PCF11O94913 1555 aaKnown RBP26.52■■□□□ 1.84
ABCB1-209ENST00000496821 LMTK3Q96Q04 1460 aa26.51■■□□□ 1.83
ABCB1-209ENST00000496821 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
ABCB1-209ENST00000496821 CLIP1P30622 1438 aa26.48■■□□□ 1.83
ABCB1-209ENST00000496821 CASKIN1Q8WXD9 1431 aa26.47■■□□□ 1.83
ABCB1-209ENST00000496821 ARHGAP5Q13017 1502 aa26.44■■□□□ 1.82
ABCB1-209ENST00000496821 ATP10AO60312 1499 aa26.44■■□□□ 1.82
ABCB1-209ENST00000496821 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
ABCB1-209ENST00000496821 KDM5CP41229 1560 aa26.44■■□□□ 1.82
ABCB1-209ENST00000496821 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
ABCB1-209ENST00000496821 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
ABCB1-209ENST00000496821 ARHGEF12Q9NZN5 1544 aa26.4■■□□□ 1.82
ABCB1-209ENST00000496821 CDC42BPBQ9Y5S2 1711 aa26.39■■□□□ 1.82
ABCB1-209ENST00000496821 FER1L4A9Z1Z3 1794 aa26.38■■□□□ 1.81
ABCB1-209ENST00000496821 PREX2Q70Z35 1606 aa26.37■■□□□ 1.81
ABCB1-209ENST00000496821 AFAP1Q8N556 730 aa26.37■■□□□ 1.81
ABCB1-209ENST00000496821 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
ABCB1-209ENST00000496821 MLECQ14165 292 aa26.36■■□□□ 1.81
ABCB1-209ENST00000496821 ABCC1P33527 1531 aa26.33■■□□□ 1.81
ABCB1-209ENST00000496821 DIP2CQ9Y2E4 1556 aa26.33■■□□□ 1.8
ABCB1-209ENST00000496821 REREQ9P2R6 1566 aa26.31■■□□□ 1.8
ABCB1-209ENST00000496821 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
ABCB1-209ENST00000496821 TRAPPC8Q9Y2L5 1435 aa26.3■■□□□ 1.8
ABCB1-209ENST00000496821 HSPA2P54652 639 aa26.29■■□□□ 1.8
ABCB1-209ENST00000496821 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
ABCB1-209ENST00000496821 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
ABCB1-209ENST00000496821 CDC42BPAQ5VT25 1732 aa26.28■■□□□ 1.8
ABCB1-209ENST00000496821 ITSN2Q9NZM3 1697 aa26.27■■□□□ 1.8
ABCB1-209ENST00000496821 FBXO41Q8TF61 875 aa26.24■■□□□ 1.79
ABCB1-209ENST00000496821 AGLP35573 1532 aa26.21■■□□□ 1.79
ABCB1-209ENST00000496821 GPATCH8Q9UKJ3 1502 aaKnown RBP26.2■■□□□ 1.79
ABCB1-209ENST00000496821 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
ABCB1-209ENST00000496821 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
ABCB1-209ENST00000496821 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
ABCB1-209ENST00000496821 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
ABCB1-209ENST00000496821 PREX1Q8TCU6 1659 aa26.18■■□□□ 1.78
ABCB1-209ENST00000496821 SYCP2Q9BX26 1530 aa26.14■■□□□ 1.77
ABCB1-209ENST00000496821 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
ABCB1-209ENST00000496821 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
ABCB1-209ENST00000496821 C3P01024 1663 aa26.09■■□□□ 1.77
ABCB1-209ENST00000496821 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
ABCB1-209ENST00000496821 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
ABCB1-209ENST00000496821 MTUS2Q5JR59 1369 aa26.06■■□□□ 1.76
ABCB1-209ENST00000496821 PLEKHH2Q8IVE3 1493 aa26.05■■□□□ 1.76
ABCB1-209ENST00000496821 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
ABCB1-209ENST00000496821 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
ABCB1-209ENST00000496821 INO80Q9ULG1 1556 aaPredicted RBP26.04■■□□□ 1.76
ABCB1-209ENST00000496821 CFDP1Q9UEE9 299 aaPredicted RBP26.04■■□□□ 1.76
ABCB1-209ENST00000496821 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
ABCB1-209ENST00000496821 ATP7AQ04656 1500 aa26.04■■□□□ 1.76
ABCB1-209ENST00000496821 CNTLNQ9NXG0 1405 aa26.03■■□□□ 1.76
ABCB1-209ENST00000496821 STRCQ7RTU9 1775 aa26.02■■□□□ 1.76
ABCB1-209ENST00000496821 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
ABCB1-209ENST00000496821 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
ABCB1-209ENST00000496821 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
ABCB1-209ENST00000496821 EHBP1L1Q8N3D4 1523 aa26.01■■□□□ 1.75
ABCB1-209ENST00000496821 ESF1Q9H501 851 aaKnown RBP25.98■■□□□ 1.75
ABCB1-209ENST00000496821 CERKQ8TCT0 537 aa25.97■■□□□ 1.75
ABCB1-209ENST00000496821 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
ABCB1-209ENST00000496821 A2MP01023 1474 aa25.95■■□□□ 1.74
ABCB1-209ENST00000496821 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
ABCB1-209ENST00000496821 SUPT6HQ7KZ85 1726 aaKnown RBP25.94■■□□□ 1.74
ABCB1-209ENST00000496821 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
ABCB1-209ENST00000496821 NPATQ14207 1427 aa25.93■■□□□ 1.74
ABCB1-209ENST00000496821 DMRT2Q9Y5R5 561 aa25.92■■□□□ 1.74
ABCB1-209ENST00000496821 ZMYM3Q14202 1370 aa25.9■■□□□ 1.74
ABCB1-209ENST00000496821 PTPRTO14522 1441 aa25.88■■□□□ 1.73
ABCB1-209ENST00000496821 NCOA1Q15788 1441 aa25.87■■□□□ 1.73
ABCB1-209ENST00000496821 ADGBQ8N7X0 1667 aa25.87■■□□□ 1.73
ABCB1-209ENST00000496821 RTEL1-TNFRSF6BF6WH68 1400 aa25.86■■□□□ 1.73
ABCB1-209ENST00000496821 CLTCQ00610 1675 aaKnown RBP25.86■■□□□ 1.73
ABCB1-209ENST00000496821 NCOA2Q15596 1464 aa25.85■■□□□ 1.73
ABCB1-209ENST00000496821 PTPRKQ15262 1439 aa25.81■■□□□ 1.72
ABCB1-209ENST00000496821 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
ABCB1-209ENST00000496821 CAMSAP1Q5T5Y3 1602 aa25.79■■□□□ 1.72
ABCB1-209ENST00000496821 GGT6Q6P531 493 aa25.79■■□□□ 1.72
ABCB1-209ENST00000496821 PPP6R1Q9UPN7 881 aa25.79■■□□□ 1.72
ABCB1-209ENST00000496821 CCDC141Q6ZP82 1450 aa25.79■■□□□ 1.72
ABCB1-209ENST00000496821 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
ABCB1-209ENST00000496821 DHX29Q7Z478 1369 aaKnown RBP25.78■■□□□ 1.72
ABCB1-209ENST00000496821 MYO3AQ8NEV4 1616 aa25.77■■□□□ 1.72
ABCB1-209ENST00000496821 LTBP4Q8N2S1 1624 aa25.77■■□□□ 1.72
ABCB1-209ENST00000496821 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
ABCB1-209ENST00000496821 CEP170BQ9Y4F5 1589 aaPredicted RBP25.73■■□□□ 1.71
ABCB1-209ENST00000496821 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
ABCB1-209ENST00000496821 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
ABCB1-209ENST00000496821 ARHGEF5Q12774 1597 aa25.71■■□□□ 1.71
ABCB1-209ENST00000496821 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
ABCB1-209ENST00000496821 RSPH4AQ5TD94 716 aa25.7■■□□□ 1.7
ABCB1-209ENST00000496821 TCOF1Q13428 1488 aaKnown RBP25.69■■□□□ 1.7
ABCB1-209ENST00000496821 FAM135AQ9P2D6 1515 aa25.68■■□□□ 1.7
ABCB1-209ENST00000496821 NCKAP5LQ9HCH0 1330 aa25.66■■□□□ 1.7
ABCB1-209ENST00000496821 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
ABCB1-209ENST00000496821 IQSEC2Q5JU85 1478 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms