RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
ABCB1-209ENST00000496821 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
ABCB1-209ENST00000496821 ABCC9O60706 1549 aa36.39■■■■□ 3.42
ABCB1-209ENST00000496821 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
ABCB1-209ENST00000496821 NACADO15069 1562 aa34.45■■■■□ 3.1
ABCB1-209ENST00000496821 DNAJC5BQ9UF47 199 aa34.19■■■■□ 3.06
ABCB1-209ENST00000496821 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
ABCB1-209ENST00000496821 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
ABCB1-209ENST00000496821 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
ABCB1-209ENST00000496821 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
ABCB1-209ENST00000496821 BICRAQ9NZM4 1560 aa33.71■■■□□ 2.99
ABCB1-209ENST00000496821 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
ABCB1-209ENST00000496821 DCAF1Q9Y4B6 1507 aa33.58■■■□□ 2.97
ABCB1-209ENST00000496821 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.92
ABCB1-209ENST00000496821 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
ABCB1-209ENST00000496821 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
ABCB1-209ENST00000496821 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
ABCB1-209ENST00000496821 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
ABCB1-209ENST00000496821 NCAPD3P42695 1498 aa31.83■■■□□ 2.69
ABCB1-209ENST00000496821 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
ABCB1-209ENST00000496821 SMARCA4P51532 1647 aa31.67■■■□□ 2.66
ABCB1-209ENST00000496821 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
ABCB1-209ENST00000496821 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
ABCB1-209ENST00000496821 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.63
ABCB1-209ENST00000496821 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
ABCB1-209ENST00000496821 CUX2O14529 1486 aa31.4■■■□□ 2.62
ABCB1-209ENST00000496821 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
ABCB1-209ENST00000496821 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
ABCB1-209ENST00000496821 DNAJC5Q9H3Z4 198 aa31.35■■■□□ 2.61
ABCB1-209ENST00000496821 NESP48681 1621 aa31.3■■■□□ 2.6
ABCB1-209ENST00000496821 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
ABCB1-209ENST00000496821 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
ABCB1-209ENST00000496821 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
ABCB1-209ENST00000496821 WIZO95785 1651 aa30.89■■■□□ 2.54
ABCB1-209ENST00000496821 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
ABCB1-209ENST00000496821 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
ABCB1-209ENST00000496821 CADPSQ9ULU8 1353 aa30.83■■■□□ 2.53
ABCB1-209ENST00000496821 RSF1Q96T23 1441 aaPredicted RBP30.65■■■□□ 2.5
ABCB1-209ENST00000496821 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
ABCB1-209ENST00000496821 WDR62O43379 1518 aa30.58■■■□□ 2.49
ABCB1-209ENST00000496821 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
ABCB1-209ENST00000496821 CFTRP13569 1480 aa30.5■■■□□ 2.47
ABCB1-209ENST00000496821 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
ABCB1-209ENST00000496821 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
ABCB1-209ENST00000496821 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
ABCB1-209ENST00000496821 CCDC88BA6NC98 1476 aa30.18■■■□□ 2.42
ABCB1-209ENST00000496821 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
ABCB1-209ENST00000496821 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
ABCB1-209ENST00000496821 OSCARQ8IYS5 282 aa29.9■■■□□ 2.38
ABCB1-209ENST00000496821 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
ABCB1-209ENST00000496821 IFT140Q96RY7 1462 aa29.89■■■□□ 2.38
ABCB1-209ENST00000496821 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
ABCB1-209ENST00000496821 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
ABCB1-209ENST00000496821 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
ABCB1-209ENST00000496821 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
ABCB1-209ENST00000496821 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
ABCB1-209ENST00000496821 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
ABCB1-209ENST00000496821 AQRO60306 1485 aaKnown RBP eCLIP29.57■■■□□ 2.32
ABCB1-209ENST00000496821 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
ABCB1-209ENST00000496821 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
ABCB1-209ENST00000496821 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
ABCB1-209ENST00000496821 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
ABCB1-209ENST00000496821 ARHGEF11O15085 1522 aa29.48■■■□□ 2.31
ABCB1-209ENST00000496821 SOGA1O94964 1423 aa29.44■■■□□ 2.3
ABCB1-209ENST00000496821 CHD1O14646 1710 aa29.43■■■□□ 2.3
ABCB1-209ENST00000496821 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
ABCB1-209ENST00000496821 CUX1P39880 1505 aa29.4■■■□□ 2.3
ABCB1-209ENST00000496821 TDRD9Q8NDG6 1382 aaKnown RBP29.38■■■□□ 2.29
ABCB1-209ENST00000496821 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
ABCB1-209ENST00000496821 FBLN2P98095 1184 aa29.28■■■□□ 2.28
ABCB1-209ENST00000496821 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
ABCB1-209ENST00000496821 MAGI1Q96QZ7 1491 aaPredicted RBP29.22■■■□□ 2.27
ABCB1-209ENST00000496821 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
ABCB1-209ENST00000496821 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
ABCB1-209ENST00000496821 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
ABCB1-209ENST00000496821 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
ABCB1-209ENST00000496821 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
ABCB1-209ENST00000496821 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
ABCB1-209ENST00000496821 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
ABCB1-209ENST00000496821 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
ABCB1-209ENST00000496821 GAPVD1Q14C86 1478 aa29.09■■■□□ 2.25
ABCB1-209ENST00000496821 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
ABCB1-209ENST00000496821 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
ABCB1-209ENST00000496821 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
ABCB1-209ENST00000496821 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
ABCB1-209ENST00000496821 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
ABCB1-209ENST00000496821 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
ABCB1-209ENST00000496821 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
ABCB1-209ENST00000496821 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
ABCB1-209ENST00000496821 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
ABCB1-209ENST00000496821 NUP160Q12769 1436 aa28.77■■■□□ 2.2
ABCB1-209ENST00000496821 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
ABCB1-209ENST00000496821 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
ABCB1-209ENST00000496821 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
ABCB1-209ENST00000496821 ERCC6L2Q5T890 1561 aa28.7■■■□□ 2.18
ABCB1-209ENST00000496821 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
ABCB1-209ENST00000496821 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
ABCB1-209ENST00000496821 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
ABCB1-209ENST00000496821 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
ABCB1-209ENST00000496821 IGF1RP08069 1367 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms