RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 ARHGAP5Q13017 1502 aa35.42■■■■□ 3.26
PCOLCE-210ENST00000496269 VPS8Q8N3P4 1428 aa35.41■■■■□ 3.26
PCOLCE-210ENST00000496269 ARHGEF40Q8TER5 1519 aa35.38■■■■□ 3.25
PCOLCE-210ENST00000496269 POGZQ7Z3K3 1410 aa35.38■■■■□ 3.25
PCOLCE-210ENST00000496269 EFCAB2Q5VUJ9 269 aa35.37■■■■□ 3.25
PCOLCE-210ENST00000496269 SCAPERQ9BY12 1400 aa35.37■■■■□ 3.25
PCOLCE-210ENST00000496269 EHBP1L1Q8N3D4 1523 aa35.36■■■■□ 3.25
PCOLCE-210ENST00000496269 TIAM1Q13009 1591 aa35.33■■■■□ 3.25
PCOLCE-210ENST00000496269 AEBP2Q6ZN18 517 aaPredicted RBP35.32■■■■□ 3.24
PCOLCE-210ENST00000496269 ABCC1P33527 1531 aa35.31■■■■□ 3.24
PCOLCE-210ENST00000496269 GPATCH8Q9UKJ3 1502 aaKnown RBP35.31■■■■□ 3.24
PCOLCE-210ENST00000496269 MTUS2Q5JR59 1369 aa35.29■■■■□ 3.24
PCOLCE-210ENST00000496269 ITSN2Q9NZM3 1697 aa35.28■■■■□ 3.24
PCOLCE-210ENST00000496269 KDM5CP41229 1560 aa35.28■■■■□ 3.24
PCOLCE-210ENST00000496269 ARHGEF12Q9NZN5 1544 aa35.27■■■■□ 3.24
PCOLCE-210ENST00000496269 MAGI2Q86UL8 1455 aa35.26■■■■□ 3.23
PCOLCE-210ENST00000496269 ZFYVE16Q7Z3T8 1539 aa35.26■■■■□ 3.23
PCOLCE-210ENST00000496269 SAMD9LQ8IVG5 1584 aa35.25■■■■□ 3.23
PCOLCE-210ENST00000496269 SIGLEC1Q9BZZ2 1709 aa35.25■■■■□ 3.23
PCOLCE-210ENST00000496269 YEATS2Q9ULM3 1422 aa35.23■■■■□ 3.23
PCOLCE-210ENST00000496269 ZNF518AQ6AHZ1 1483 aa35.22■■■■□ 3.23
PCOLCE-210ENST00000496269 MAP3K1Q13233 1512 aa35.2■■■■□ 3.23
PCOLCE-210ENST00000496269 SUPT6HQ7KZ85 1726 aaKnown RBP35.18■■■■□ 3.22
PCOLCE-210ENST00000496269 ADAMTSL3P82987 1691 aa35.17■■■■□ 3.22
PCOLCE-210ENST00000496269 BCORL1Q5H9F3 1711 aa35.16■■■■□ 3.22
PCOLCE-210ENST00000496269 TRAPPC8Q9Y2L5 1435 aa35.15■■■■□ 3.22
PCOLCE-210ENST00000496269 CCNB3Q8WWL7 1395 aa35.14■■■■□ 3.22
PCOLCE-210ENST00000496269 HECW2Q9P2P5 1572 aa35.14■■■■□ 3.22
PCOLCE-210ENST00000496269 LRRC9Q6ZRR7 1453 aa35.13■■■■□ 3.21
PCOLCE-210ENST00000496269 SYCP2Q9BX26 1530 aa35.11■■■■□ 3.21
PCOLCE-210ENST00000496269 NCOA2Q15596 1464 aa35.11■■■■□ 3.21
PCOLCE-210ENST00000496269 AFAP1Q8N556 730 aa35.1■■■■□ 3.21
PCOLCE-210ENST00000496269 MLH3Q9UHC1 1453 aa35.08■■■■□ 3.21
PCOLCE-210ENST00000496269 DIP2CQ9Y2E4 1556 aa35.08■■■■□ 3.21
PCOLCE-210ENST00000496269 ABCA6Q8N139 1617 aa35.06■■■■□ 3.2
PCOLCE-210ENST00000496269 KIDINS220Q9ULH0 1771 aa35.05■■■■□ 3.2
PCOLCE-210ENST00000496269 KIAA1107Q9UPP5 1409 aa35.05■■■■□ 3.2
PCOLCE-210ENST00000496269 ATP10AO60312 1499 aa35.04■■■■□ 3.2
PCOLCE-210ENST00000496269 CFDP1Q9UEE9 299 aaPredicted RBP35.03■■■■□ 3.2
PCOLCE-210ENST00000496269 PLEKHH2Q8IVE3 1493 aa35.03■■■■□ 3.2
PCOLCE-210ENST00000496269 REREQ9P2R6 1566 aa35.01■■■■□ 3.2
PCOLCE-210ENST00000496269 C9orf84Q5VXU9 1444 aa35.01■■■■□ 3.2
PCOLCE-210ENST00000496269 MADDQ8WXG6 1647 aa35.01■■■■□ 3.19
PCOLCE-210ENST00000496269 KANK4Q5T7N3 995 aaPredicted RBP34.99■■■■□ 3.19
PCOLCE-210ENST00000496269 ZNF777Q9ULD5 760 aaPredicted RBP34.99■■■■□ 3.19
PCOLCE-210ENST00000496269 INO80Q9ULG1 1556 aaPredicted RBP34.96■■■■□ 3.19
PCOLCE-210ENST00000496269 MBD5Q9P267 1494 aa34.95■■■■□ 3.19
PCOLCE-210ENST00000496269 ZNF644Q9H582 1327 aaPredicted RBP34.94■■■■□ 3.18
PCOLCE-210ENST00000496269 HNRNPMP52272 730 aaKnown RBP eCLIP34.93■■■■□ 3.18
PCOLCE-210ENST00000496269 ARID4BQ4LE39 1312 aaPredicted RBP34.91■■■■□ 3.18
PCOLCE-210ENST00000496269 PTPRMP28827 1452 aa34.9■■■■□ 3.18
PCOLCE-210ENST00000496269 CAMSAP2Q08AD1 1489 aa34.9■■■■□ 3.18
PCOLCE-210ENST00000496269 RIMS1Q86UR5 1692 aaKnown RBP34.89■■■■□ 3.18
PCOLCE-210ENST00000496269 ATP7AQ04656 1500 aa34.88■■■■□ 3.17
PCOLCE-210ENST00000496269 AGLP35573 1532 aa34.85■■■■□ 3.17
PCOLCE-210ENST00000496269 FER1L4A9Z1Z3 1794 aa34.85■■■■□ 3.17
PCOLCE-210ENST00000496269 MYOM3Q5VTT5 1437 aa34.8■■■■□ 3.16
PCOLCE-210ENST00000496269 SPAG9O60271 1321 aaKnown RBP34.8■■■■□ 3.16
PCOLCE-210ENST00000496269 PLXNC1O60486 1568 aa34.79■■■■□ 3.16
PCOLCE-210ENST00000496269 ARHGEF5Q12774 1597 aa34.79■■■■□ 3.16
PCOLCE-210ENST00000496269 CCDC141Q6ZP82 1450 aa34.76■■■■□ 3.15
PCOLCE-210ENST00000496269 MIA2Q96PC5 1412 aa34.75■■■■□ 3.15
PCOLCE-210ENST00000496269 MYT1LQ9UL68 1186 aa34.75■■■■□ 3.15
PCOLCE-210ENST00000496269 ADGBQ8N7X0 1667 aa34.73■■■■□ 3.15
PCOLCE-210ENST00000496269 RTEL1-TNFRSF6BF6WH68 1400 aa34.72■■■■□ 3.15
PCOLCE-210ENST00000496269 MLECQ14165 292 aa34.71■■■■□ 3.15
PCOLCE-210ENST00000496269 APLP2Q06481 763 aa34.69■■■■□ 3.14
PCOLCE-210ENST00000496269 A2MP01023 1474 aa34.67■■■■□ 3.14
PCOLCE-210ENST00000496269 MAST1Q9Y2H9 1570 aa34.64■■■■□ 3.14
PCOLCE-210ENST00000496269 PTPN23Q9H3S7 1636 aa34.63■■■■□ 3.13
PCOLCE-210ENST00000496269 RSPH4AQ5TD94 716 aa34.61■■■■□ 3.13
PCOLCE-210ENST00000496269 TCOF1Q13428 1488 aaKnown RBP34.58■■■■□ 3.13
PCOLCE-210ENST00000496269 FGD6Q6ZV73 1430 aa34.57■■■■□ 3.13
PCOLCE-210ENST00000496269 CROCC2H7BZ55 1655 aa34.57■■■■□ 3.12
PCOLCE-210ENST00000496269 C3P01024 1663 aa34.54■■■■□ 3.12
PCOLCE-210ENST00000496269 LMTK3Q96Q04 1460 aa34.52■■■■□ 3.12
PCOLCE-210ENST00000496269 DHX29Q7Z478 1369 aaKnown RBP34.51■■■■□ 3.12
PCOLCE-210ENST00000496269 MROH2AA6NES4 1674 aa34.51■■■■□ 3.12
PCOLCE-210ENST00000496269 DNMT1P26358 1616 aaKnown RBP34.49■■■■□ 3.11
PCOLCE-210ENST00000496269 SHANK2Q9UPX8 1470 aa34.46■■■■□ 3.11
PCOLCE-210ENST00000496269 ABCC5O15440 1437 aa34.46■■■■□ 3.11
PCOLCE-210ENST00000496269 CNTLNQ9NXG0 1405 aa34.45■■■■□ 3.11
PCOLCE-210ENST00000496269 CLTCQ00610 1675 aaKnown RBP34.44■■■■□ 3.1
PCOLCE-210ENST00000496269 PREX1Q8TCU6 1659 aa34.42■■■■□ 3.1
PCOLCE-210ENST00000496269 TSPY4P0CV99 314 aa34.42■■■■□ 3.1
PCOLCE-210ENST00000496269 TSPY10P0CW01 314 aa34.42■■■■□ 3.1
PCOLCE-210ENST00000496269 CEBPAP49715 358 aaPredicted RBP34.42■■■■□ 3.1
PCOLCE-210ENST00000496269 DAPK1P53355 1430 aa34.4■■■■□ 3.1
PCOLCE-210ENST00000496269 PLPPR3Q6T4P5 718 aa34.38■■■■□ 3.09
PCOLCE-210ENST00000496269 EIF2AK4Q9P2K8 1649 aaKnown RBP34.37■■■■□ 3.09
PCOLCE-210ENST00000496269 RNF17Q9BXT8 1623 aaKnown RBP34.37■■■■□ 3.09
PCOLCE-210ENST00000496269 SETD1BQ9UPS6 1966 aaKnown RBP34.34■■■■□ 3.09
PCOLCE-210ENST00000496269 FAM135AQ9P2D6 1515 aa34.33■■■■□ 3.09
PCOLCE-210ENST00000496269 DUOX2Q9NRD8 1548 aa34.31■■■■□ 3.08
PCOLCE-210ENST00000496269 GGT6Q6P531 493 aa34.31■■■■□ 3.08
PCOLCE-210ENST00000496269 MROH1Q8NDA8 1641 aa34.3■■■■□ 3.08
PCOLCE-210ENST00000496269 ZMYM3Q14202 1370 aa34.29■■■■□ 3.08
PCOLCE-210ENST00000496269 PPP6R1Q9UPN7 881 aa34.29■■■■□ 3.08
PCOLCE-210ENST00000496269 KIF3BO15066 747 aa34.28■■■■□ 3.08
PCOLCE-210ENST00000496269 ESF1Q9H501 851 aaKnown RBP34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms