RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ARHGEF40Q8TER5 1519 aa33.08■■■□□ 2.89
COL9A2-211ENST00000496215 ARHGAP5Q13017 1502 aa33.07■■■□□ 2.88
COL9A2-211ENST00000496215 POGZQ7Z3K3 1410 aa33.05■■■□□ 2.88
COL9A2-211ENST00000496215 SCAPERQ9BY12 1400 aa33.05■■■□□ 2.88
COL9A2-211ENST00000496215 CDC42BPAQ5VT25 1732 aa33.03■■■□□ 2.88
COL9A2-211ENST00000496215 EFCAB2Q5VUJ9 269 aa33.01■■■□□ 2.87
COL9A2-211ENST00000496215 SIGLEC1Q9BZZ2 1709 aa32.99■■■□□ 2.87
COL9A2-211ENST00000496215 YEATS2Q9ULM3 1422 aa32.99■■■□□ 2.87
COL9A2-211ENST00000496215 EHBP1L1Q8N3D4 1523 aa32.97■■■□□ 2.87
COL9A2-211ENST00000496215 ZFYVE16Q7Z3T8 1539 aa32.97■■■□□ 2.87
COL9A2-211ENST00000496215 VPS8Q8N3P4 1428 aa32.96■■■□□ 2.87
COL9A2-211ENST00000496215 ADAMTSL3P82987 1691 aa32.94■■■□□ 2.86
COL9A2-211ENST00000496215 MTUS2Q5JR59 1369 aa32.94■■■□□ 2.86
COL9A2-211ENST00000496215 BCORL1Q5H9F3 1711 aa32.92■■■□□ 2.86
COL9A2-211ENST00000496215 MAGI2Q86UL8 1455 aa32.92■■■□□ 2.86
COL9A2-211ENST00000496215 ABCC1P33527 1531 aa32.92■■■□□ 2.86
COL9A2-211ENST00000496215 ARHGEF12Q9NZN5 1544 aa32.92■■■□□ 2.86
COL9A2-211ENST00000496215 KDM5CP41229 1560 aa32.91■■■□□ 2.86
COL9A2-211ENST00000496215 ITSN2Q9NZM3 1697 aa32.88■■■□□ 2.85
COL9A2-211ENST00000496215 TIAM1Q13009 1591 aa32.88■■■□□ 2.85
COL9A2-211ENST00000496215 GPATCH8Q9UKJ3 1502 aaKnown RBP32.88■■■□□ 2.85
COL9A2-211ENST00000496215 ZNF518AQ6AHZ1 1483 aa32.87■■■□□ 2.85
COL9A2-211ENST00000496215 SAMD9LQ8IVG5 1584 aa32.85■■■□□ 2.85
COL9A2-211ENST00000496215 AFAP1Q8N556 730 aa32.83■■■□□ 2.85
COL9A2-211ENST00000496215 MADDQ8WXG6 1647 aa32.83■■■□□ 2.85
COL9A2-211ENST00000496215 TRAPPC8Q9Y2L5 1435 aa32.83■■■□□ 2.85
COL9A2-211ENST00000496215 SUPT6HQ7KZ85 1726 aaKnown RBP32.8■■■□□ 2.84
COL9A2-211ENST00000496215 HECW2Q9P2P5 1572 aa32.8■■■□□ 2.84
COL9A2-211ENST00000496215 ARID4BQ4LE39 1312 aaPredicted RBP32.79■■■□□ 2.84
COL9A2-211ENST00000496215 CCNB3Q8WWL7 1395 aa32.79■■■□□ 2.84
COL9A2-211ENST00000496215 DIP2CQ9Y2E4 1556 aa32.75■■■□□ 2.83
COL9A2-211ENST00000496215 ATP10AO60312 1499 aa32.75■■■□□ 2.83
COL9A2-211ENST00000496215 ABCA6Q8N139 1617 aa32.75■■■□□ 2.83
COL9A2-211ENST00000496215 SYCP2Q9BX26 1530 aa32.75■■■□□ 2.83
COL9A2-211ENST00000496215 PTPRMP28827 1452 aa32.74■■■□□ 2.83
COL9A2-211ENST00000496215 MLH3Q9UHC1 1453 aa32.73■■■□□ 2.83
COL9A2-211ENST00000496215 C9orf84Q5VXU9 1444 aa32.72■■■□□ 2.83
COL9A2-211ENST00000496215 RIMS1Q86UR5 1692 aaKnown RBP32.71■■■□□ 2.83
COL9A2-211ENST00000496215 MAP3K1Q13233 1512 aa32.71■■■□□ 2.83
COL9A2-211ENST00000496215 ZNF777Q9ULD5 760 aaPredicted RBP32.7■■■□□ 2.83
COL9A2-211ENST00000496215 KIDINS220Q9ULH0 1771 aa32.7■■■□□ 2.82
COL9A2-211ENST00000496215 NCOA2Q15596 1464 aa32.68■■■□□ 2.82
COL9A2-211ENST00000496215 LRRC9Q6ZRR7 1453 aa32.68■■■□□ 2.82
COL9A2-211ENST00000496215 PLEKHH2Q8IVE3 1493 aa32.68■■■□□ 2.82
COL9A2-211ENST00000496215 CFDP1Q9UEE9 299 aaPredicted RBP32.66■■■□□ 2.82
COL9A2-211ENST00000496215 REREQ9P2R6 1566 aa32.64■■■□□ 2.82
COL9A2-211ENST00000496215 KIAA1107Q9UPP5 1409 aa32.62■■■□□ 2.81
COL9A2-211ENST00000496215 HNRNPMP52272 730 aaKnown RBP eCLIP32.62■■■□□ 2.81
COL9A2-211ENST00000496215 FER1L4A9Z1Z3 1794 aa32.61■■■□□ 2.81
COL9A2-211ENST00000496215 ZNF644Q9H582 1327 aaPredicted RBP32.61■■■□□ 2.81
COL9A2-211ENST00000496215 MLECQ14165 292 aa32.59■■■□□ 2.81
COL9A2-211ENST00000496215 MYT1LQ9UL68 1186 aa32.59■■■□□ 2.81
COL9A2-211ENST00000496215 INO80Q9ULG1 1556 aaPredicted RBP32.58■■■□□ 2.81
COL9A2-211ENST00000496215 MBD5Q9P267 1494 aa32.54■■■□□ 2.8
COL9A2-211ENST00000496215 KANK4Q5T7N3 995 aaPredicted RBP32.54■■■□□ 2.8
COL9A2-211ENST00000496215 ATP7AQ04656 1500 aa32.53■■■□□ 2.8
COL9A2-211ENST00000496215 CAMSAP2Q08AD1 1489 aa32.52■■■□□ 2.8
COL9A2-211ENST00000496215 AGLP35573 1532 aa32.51■■■□□ 2.8
COL9A2-211ENST00000496215 SPAG9O60271 1321 aaKnown RBP32.5■■■□□ 2.79
COL9A2-211ENST00000496215 APLP2Q06481 763 aa32.47■■■□□ 2.79
COL9A2-211ENST00000496215 PLXNC1O60486 1568 aa32.44■■■□□ 2.78
COL9A2-211ENST00000496215 CCDC141Q6ZP82 1450 aa32.41■■■□□ 2.78
COL9A2-211ENST00000496215 LMTK3Q96Q04 1460 aa32.41■■■□□ 2.78
COL9A2-211ENST00000496215 MYOM3Q5VTT5 1437 aa32.4■■■□□ 2.78
COL9A2-211ENST00000496215 ADGBQ8N7X0 1667 aa32.4■■■□□ 2.78
COL9A2-211ENST00000496215 PLPPR3Q6T4P5 718 aa32.39■■■□□ 2.78
COL9A2-211ENST00000496215 ARHGEF5Q12774 1597 aa32.39■■■□□ 2.78
COL9A2-211ENST00000496215 A2MP01023 1474 aa32.35■■■□□ 2.77
COL9A2-211ENST00000496215 MIA2Q96PC5 1412 aa32.34■■■□□ 2.77
COL9A2-211ENST00000496215 CEBPAP49715 358 aaPredicted RBP32.32■■■□□ 2.76
COL9A2-211ENST00000496215 RTEL1-TNFRSF6BF6WH68 1400 aa32.32■■■□□ 2.76
COL9A2-211ENST00000496215 C3P01024 1663 aa32.31■■■□□ 2.76
COL9A2-211ENST00000496215 ILDR1Q86SU0 546 aaPredicted RBP32.28■■■□□ 2.76
COL9A2-211ENST00000496215 RSPH4AQ5TD94 716 aa32.25■■■□□ 2.75
COL9A2-211ENST00000496215 PTPN23Q9H3S7 1636 aa32.25■■■□□ 2.75
COL9A2-211ENST00000496215 PREX1Q8TCU6 1659 aa32.23■■■□□ 2.75
COL9A2-211ENST00000496215 MAST1Q9Y2H9 1570 aa32.23■■■□□ 2.75
COL9A2-211ENST00000496215 MROH2AA6NES4 1674 aa32.21■■■□□ 2.75
COL9A2-211ENST00000496215 CROCC2H7BZ55 1655 aa32.21■■■□□ 2.75
COL9A2-211ENST00000496215 CLTCQ00610 1675 aaKnown RBP32.2■■■□□ 2.74
COL9A2-211ENST00000496215 FGD6Q6ZV73 1430 aa32.18■■■□□ 2.74
COL9A2-211ENST00000496215 CNTLNQ9NXG0 1405 aa32.18■■■□□ 2.74
COL9A2-211ENST00000496215 HSPA2P54652 639 aa32.18■■■□□ 2.74
COL9A2-211ENST00000496215 DHX29Q7Z478 1369 aaKnown RBP32.18■■■□□ 2.74
COL9A2-211ENST00000496215 ESF1Q9H501 851 aaKnown RBP32.15■■■□□ 2.74
COL9A2-211ENST00000496215 TCOF1Q13428 1488 aaKnown RBP32.14■■■□□ 2.74
COL9A2-211ENST00000496215 TSPY4P0CV99 314 aa32.13■■■□□ 2.73
COL9A2-211ENST00000496215 TSPY10P0CW01 314 aa32.13■■■□□ 2.73
COL9A2-211ENST00000496215 DNMT1P26358 1616 aaKnown RBP32.11■■■□□ 2.73
COL9A2-211ENST00000496215 SHANK2Q9UPX8 1470 aa32.1■■■□□ 2.73
COL9A2-211ENST00000496215 GGT6Q6P531 493 aa32.1■■■□□ 2.73
COL9A2-211ENST00000496215 SETD1BQ9UPS6 1966 aaKnown RBP32.08■■■□□ 2.73
COL9A2-211ENST00000496215 ZMYM3Q14202 1370 aa32.08■■■□□ 2.73
COL9A2-211ENST00000496215 ABCC5O15440 1437 aa32.05■■■□□ 2.72
COL9A2-211ENST00000496215 UHRF1BP1Q6BDS2 1440 aa32.05■■■□□ 2.72
COL9A2-211ENST00000496215 EIF2AK4Q9P2K8 1649 aaKnown RBP32.04■■■□□ 2.72
COL9A2-211ENST00000496215 DAPK1P53355 1430 aa32.03■■■□□ 2.72
COL9A2-211ENST00000496215 KIF3BO15066 747 aa32.03■■■□□ 2.72
COL9A2-211ENST00000496215 FAM135AQ9P2D6 1515 aa32.01■■■□□ 2.72
COL9A2-211ENST00000496215 NPATQ14207 1427 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms