RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 PHLDB1Q86UU1 1377 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 RAPGEF2Q9Y4G8 1499 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 ZNF771Q7L3S4 317 aaPredicted RBP4.87□□□□□ -1.63
PHC3-215ENST00000495893 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 HMGB1P09429 215 aaKnown RBP4.87□□□□□ -1.63
PHC3-215ENST00000495893 CUL7Q14999 1698 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 TEX35Q5T0J7 233 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 CFAP44Q96MT7 982 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 HSP90AB1P08238 724 aaKnown RBP4.87□□□□□ -1.63
PHC3-215ENST00000495893 TAF3Q5VWG9 929 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 GBP4Q96PP9 640 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 PLB1Q6P1J6 1458 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 GPS2Q13227 327 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 DRC7Q8IY82 874 aa4.87□□□□□ -1.63
PHC3-215ENST00000495893 ABCA10Q8WWZ4 1543 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 DMRT2Q9Y5R5 561 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 POLA1P09884 1462 aaPredicted RBP4.86□□□□□ -1.63
PHC3-215ENST00000495893 SYAP1Q96A49 352 aaPredicted RBP4.86□□□□□ -1.63
PHC3-215ENST00000495893 PRDM2Q13029 1718 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 TSPY4P0CV99 314 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 TSPY10P0CW01 314 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 NOC3LQ8WTT2 800 aaKnown RBP4.86□□□□□ -1.63
PHC3-215ENST00000495893 NEFHP12036 1026 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 HSCBQ8IWL3 235 aa4.86□□□□□ -1.63
PHC3-215ENST00000495893 CCDC66A2RUB6 948 aa4.85□□□□□ -1.63
PHC3-215ENST00000495893 PRG4Q92954 1404 aaPredicted RBP4.85□□□□□ -1.63
PHC3-215ENST00000495893 TMC1Q8TDI8 760 aa4.85□□□□□ -1.63
PHC3-215ENST00000495893 CWC15Q9P013 229 aaKnown RBP4.85□□□□□ -1.63
PHC3-215ENST00000495893 MTUS2Q5JR59 1369 aa4.85□□□□□ -1.63
PHC3-215ENST00000495893 PLCB2Q00722 1185 aa4.85□□□□□ -1.63
PHC3-215ENST00000495893 FAM9BQ8IZU0 186 aa4.84□□□□□ -1.63
PHC3-215ENST00000495893 AQRO60306 1485 aaKnown RBP eCLIP4.84□□□□□ -1.631e-6■■■■□ 21.2
PHC3-215ENST00000495893 CCDC18Q5T9S5 1454 aa4.84□□□□□ -1.63
PHC3-215ENST00000495893 FAM69CQ0P6D2 419 aa4.84□□□□□ -1.63
PHC3-215ENST00000495893 THOC2Q8NI27 1593 aaKnown RBP4.84□□□□□ -1.63
PHC3-215ENST00000495893 TONSLQ96HA7 1378 aa4.84□□□□□ -1.63
PHC3-215ENST00000495893 RBM19Q9Y4C8 960 aaKnown RBP4.84□□□□□ -1.64
PHC3-215ENST00000495893 CSPP1Q1MSJ5 1256 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 EFCAB2Q5VUJ9 269 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 PHF14O94880 888 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 KCNH8Q96L42 1107 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 WDR43Q15061 677 aaKnown RBP eCLIP4.83□□□□□ -1.64
PHC3-215ENST00000495893 CHMP4BQ9H444 224 aaKnown RBP4.83□□□□□ -1.64
PHC3-215ENST00000495893 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
PHC3-215ENST00000495893 KIAA0586Q9BVV6 1533 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 GRIN2AQ12879 1464 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 RSPH4AQ5TD94 716 aa4.83□□□□□ -1.64
PHC3-215ENST00000495893 PPP1R15AO75807 674 aaPredicted RBP4.83□□□□□ -1.64
PHC3-215ENST00000495893 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.83□□□□□ -1.64
PHC3-215ENST00000495893 KIF21AQ7Z4S6 1674 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 TPM4P67936 248 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 RRP12Q5JTH9 1297 aaKnown RBP4.82□□□□□ -1.64
PHC3-215ENST00000495893 JPH4Q96JJ6 628 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 ZNF777Q9ULD5 760 aaPredicted RBP4.82□□□□□ -1.64
PHC3-215ENST00000495893 PLEKHH2Q8IVE3 1493 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 CCNB3Q8WWL7 1395 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 ARID3AQ99856 593 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 TPM2P07951 284 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 PDE4CQ08493 712 aa4.82□□□□□ -1.64
PHC3-215ENST00000495893 RDXP35241 583 aaKnown RBP4.81□□□□□ -1.64
PHC3-215ENST00000495893 CALD1Q05682 793 aaKnown RBP4.81□□□□□ -1.64
PHC3-215ENST00000495893 TOP2BQ02880 1626 aa4.81□□□□□ -1.64
PHC3-215ENST00000495893 EIF4G3O43432 1585 aaKnown RBP4.81□□□□□ -1.64
PHC3-215ENST00000495893 MIER1Q8N108 512 aa4.81□□□□□ -1.64
PHC3-215ENST00000495893 MRS2Q9HD23 443 aa4.81□□□□□ -1.64
PHC3-215ENST00000495893 URB2Q14146 1524 aaKnown RBP4.8□□□□□ -1.64
PHC3-215ENST00000495893 DDX10Q13206 875 aaKnown RBP4.8□□□□□ -1.64
PHC3-215ENST00000495893 MS4A1P11836 297 aa4.8□□□□□ -1.64
PHC3-215ENST00000495893 HMMRO75330 724 aa4.8□□□□□ -1.64
PHC3-215ENST00000495893 IRX6P78412 446 aaPredicted RBP4.8□□□□□ -1.64
PHC3-215ENST00000495893 EFCAB5A4FU69 1503 aa4.8□□□□□ -1.64
PHC3-215ENST00000495893 TSPYL1Q9H0U9 437 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 CCDC191Q8NCU4 936 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 CCDC70Q6NSX1 233 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 MCCP23508 829 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 DDX11L8A8MPP1 907 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 IPO9Q96P70 1041 aaKnown RBP4.79□□□□□ -1.64
PHC3-215ENST00000495893 HSP90B1P14625 803 aaKnown RBP4.79□□□□□ -1.64
PHC3-215ENST00000495893 RRP9O43818 475 aaKnown RBP4.79□□□□□ -1.64
PHC3-215ENST00000495893 C14orf37Q86TY3 774 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 CFDP1Q9UEE9 299 aaPredicted RBP4.79□□□□□ -1.64
PHC3-215ENST00000495893 AKNAQ7Z591 1439 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 UACAQ9BZF9 1416 aa4.79□□□□□ -1.64
PHC3-215ENST00000495893 HMGB2P26583 209 aaKnown RBP4.79□□□□□ -1.64
PHC3-215ENST00000495893 RAD54L2Q9Y4B4 1467 aa4.78□□□□□ -1.64
PHC3-215ENST00000495893 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
PHC3-215ENST00000495893 USP8P40818 1118 aa4.78□□□□□ -1.64
PHC3-215ENST00000495893 FANCAO15360 1455 aa4.78□□□□□ -1.64
PHC3-215ENST00000495893 IQGAP2Q13576 1575 aa4.78□□□□□ -1.64
PHC3-215ENST00000495893 PATL2C9JE40 543 aaKnown RBP4.78□□□□□ -1.65
PHC3-215ENST00000495893 EID1Q9Y6B2 187 aa4.77□□□□□ -1.65
PHC3-215ENST00000495893 DCAF8L1A6NGE4 600 aa4.77□□□□□ -1.65
PHC3-215ENST00000495893 TCERG1O14776 1098 aaKnown RBP4.77□□□□□ -1.65
PHC3-215ENST00000495893 GSE1Q14687 1217 aa4.77□□□□□ -1.65
PHC3-215ENST00000495893 SKOR2Q2VWA4 1001 aaPredicted RBP4.77□□□□□ -1.65
PHC3-215ENST00000495893 TIMELESSQ9UNS1 1208 aa4.77□□□□□ -1.65
PHC3-215ENST00000495893 HOMEZQ8IX15 550 aa4.77□□□□□ -1.65
PHC3-215ENST00000495893 MEX3CQ5U5Q3 659 aaKnown RBP4.77□□□□□ -1.65
PHC3-215ENST00000495893 FTSJ3Q8IY81 847 aaKnown RBP4.77□□□□□ -1.65
PHC3-215ENST00000495893 CCDC34Q96HJ3 373 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms