RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-214ENST00000495748 KIF14Q15058 1648 aa12.57□□□□□ -0.4
PTPRK-214ENST00000495748 MADDQ8WXG6 1647 aa12.57□□□□□ -0.4
PTPRK-214ENST00000495748 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
PTPRK-214ENST00000495748 ATP10AO60312 1499 aa12.55□□□□□ -0.4
PTPRK-214ENST00000495748 CCDC18Q5T9S5 1454 aa12.55□□□□□ -0.4
PTPRK-214ENST00000495748 MYO5CQ9NQX4 1742 aa12.55□□□□□ -0.4
PTPRK-214ENST00000495748 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
PTPRK-214ENST00000495748 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
PTPRK-214ENST00000495748 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
PTPRK-214ENST00000495748 PCF11O94913 1555 aaKnown RBP12.54□□□□□ -0.4
PTPRK-214ENST00000495748 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
PTPRK-214ENST00000495748 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
PTPRK-214ENST00000495748 MLECQ14165 292 aa12.53□□□□□ -0.4
PTPRK-214ENST00000495748 RIMS1Q86UR5 1692 aaKnown RBP12.53□□□□□ -0.4
PTPRK-214ENST00000495748 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
PTPRK-214ENST00000495748 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
PTPRK-214ENST00000495748 LMTK3Q96Q04 1460 aa12.5□□□□□ -0.41
PTPRK-214ENST00000495748 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
PTPRK-214ENST00000495748 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
PTPRK-214ENST00000495748 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
PTPRK-214ENST00000495748 FER1L4A9Z1Z3 1794 aa12.47□□□□□ -0.41
PTPRK-214ENST00000495748 KDM5CP41229 1560 aa12.47□□□□□ -0.41
PTPRK-214ENST00000495748 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
PTPRK-214ENST00000495748 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.41
PTPRK-214ENST00000495748 HSPA2P54652 639 aa12.46□□□□□ -0.41
PTPRK-214ENST00000495748 PREX2Q70Z35 1606 aa12.44□□□□□ -0.42
PTPRK-214ENST00000495748 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
PTPRK-214ENST00000495748 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
PTPRK-214ENST00000495748 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
PTPRK-214ENST00000495748 SETD1BQ9UPS6 1966 aaKnown RBP12.43□□□□□ -0.42
PTPRK-214ENST00000495748 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
PTPRK-214ENST00000495748 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
PTPRK-214ENST00000495748 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-214ENST00000495748 ABCC1P33527 1531 aa12.42□□□□□ -0.42
PTPRK-214ENST00000495748 AGLP35573 1532 aa12.42□□□□□ -0.42
PTPRK-214ENST00000495748 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
PTPRK-214ENST00000495748 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
PTPRK-214ENST00000495748 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
PTPRK-214ENST00000495748 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
PTPRK-214ENST00000495748 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-214ENST00000495748 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-214ENST00000495748 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
PTPRK-214ENST00000495748 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
PTPRK-214ENST00000495748 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
PTPRK-214ENST00000495748 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
PTPRK-214ENST00000495748 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
PTPRK-214ENST00000495748 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
PTPRK-214ENST00000495748 KIAA1107Q9UPP5 1409 aa12.38□□□□□ -0.43
PTPRK-214ENST00000495748 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
PTPRK-214ENST00000495748 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
PTPRK-214ENST00000495748 CDC42BPAQ5VT25 1732 aa12.37□□□□□ -0.43
PTPRK-214ENST00000495748 HNRNPMP52272 730 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■□□ 18.3
PTPRK-214ENST00000495748 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
PTPRK-214ENST00000495748 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
PTPRK-214ENST00000495748 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
PTPRK-214ENST00000495748 SYCP2Q9BX26 1530 aa12.34□□□□□ -0.43
PTPRK-214ENST00000495748 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
PTPRK-214ENST00000495748 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
PTPRK-214ENST00000495748 NPATQ14207 1427 aa12.31□□□□□ -0.44
PTPRK-214ENST00000495748 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
PTPRK-214ENST00000495748 PTPRTO14522 1441 aa12.3□□□□□ -0.44
PTPRK-214ENST00000495748 C3P01024 1663 aa12.3□□□□□ -0.44
PTPRK-214ENST00000495748 A2MP01023 1474 aa12.3□□□□□ -0.44
PTPRK-214ENST00000495748 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
PTPRK-214ENST00000495748 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
PTPRK-214ENST00000495748 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
PTPRK-214ENST00000495748 GGT6Q6P531 493 aa12.28□□□□□ -0.44
PTPRK-214ENST00000495748 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
PTPRK-214ENST00000495748 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
PTPRK-214ENST00000495748 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-214ENST00000495748 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
PTPRK-214ENST00000495748 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
PTPRK-214ENST00000495748 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
PTPRK-214ENST00000495748 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
PTPRK-214ENST00000495748 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 PKD2Q13563 968 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
PTPRK-214ENST00000495748 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 ZNF644Q9H582 1327 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-214ENST00000495748 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
PTPRK-214ENST00000495748 NCOA2Q15596 1464 aa12.22□□□□□ -0.45
PTPRK-214ENST00000495748 CCDC141Q6ZP82 1450 aa12.22□□□□□ -0.45
PTPRK-214ENST00000495748 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
PTPRK-214ENST00000495748 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 KIF3BO15066 747 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 FAM135AQ9P2D6 1515 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
PTPRK-214ENST00000495748 CAMSAP2Q08AD1 1489 aa12.19□□□□□ -0.46
PTPRK-214ENST00000495748 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
PTPRK-214ENST00000495748 WASHC2CQ9Y4E1 1318 aa12.18□□□□□ -0.46
PTPRK-214ENST00000495748 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
PTPRK-214ENST00000495748 CEP170BQ9Y4F5 1589 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-214ENST00000495748 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-214ENST00000495748 A2ML1A8K2U0 1454 aa12.16□□□□□ -0.46
PTPRK-214ENST00000495748 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms