RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-205ENST00000495653 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
PTPN23-205ENST00000495653 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
PTPN23-205ENST00000495653 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
PTPN23-205ENST00000495653 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
PTPN23-205ENST00000495653 SCAPERQ9BY12 1400 aa22.22■■□□□ 1.15
PTPN23-205ENST00000495653 GPATCH8Q9UKJ3 1502 aaKnown RBP22.18■■□□□ 1.14
PTPN23-205ENST00000495653 POGZQ7Z3K3 1410 aa22.18■■□□□ 1.14
PTPN23-205ENST00000495653 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
PTPN23-205ENST00000495653 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
PTPN23-205ENST00000495653 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
PTPN23-205ENST00000495653 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
PTPN23-205ENST00000495653 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.14
PTPN23-205ENST00000495653 ABCC1P33527 1531 aa22.14■■□□□ 1.13
PTPN23-205ENST00000495653 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
PTPN23-205ENST00000495653 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
PTPN23-205ENST00000495653 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
PTPN23-205ENST00000495653 ZFYVE16Q7Z3T8 1539 aa22.11■■□□□ 1.13
PTPN23-205ENST00000495653 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
PTPN23-205ENST00000495653 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
PTPN23-205ENST00000495653 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
PTPN23-205ENST00000495653 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
PTPN23-205ENST00000495653 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
PTPN23-205ENST00000495653 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
PTPN23-205ENST00000495653 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
PTPN23-205ENST00000495653 KDM5CP41229 1560 aa22.08■■□□□ 1.13
PTPN23-205ENST00000495653 AFAP1Q8N556 730 aa22.08■■□□□ 1.13
PTPN23-205ENST00000495653 CFDP1Q9UEE9 299 aaPredicted RBP22.08■■□□□ 1.13
PTPN23-205ENST00000495653 MAGI2Q86UL8 1455 aa22.08■■□□□ 1.12
PTPN23-205ENST00000495653 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
PTPN23-205ENST00000495653 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
PTPN23-205ENST00000495653 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
PTPN23-205ENST00000495653 HECW2Q9P2P5 1572 aa22.04■■□□□ 1.12
PTPN23-205ENST00000495653 SIGLEC1Q9BZZ2 1709 aa22.04■■□□□ 1.12
PTPN23-205ENST00000495653 APLP2Q06481 763 aa22.01■■□□□ 1.11
PTPN23-205ENST00000495653 ARID4BQ4LE39 1312 aaPredicted RBP22.01■■□□□ 1.11
PTPN23-205ENST00000495653 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
PTPN23-205ENST00000495653 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.118e-7■■■□□ 14.6
PTPN23-205ENST00000495653 PLEKHH2Q8IVE3 1493 aa22■■□□□ 1.11
PTPN23-205ENST00000495653 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
PTPN23-205ENST00000495653 BCORL1Q5H9F3 1711 aa21.99■■□□□ 1.11
PTPN23-205ENST00000495653 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
PTPN23-205ENST00000495653 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
PTPN23-205ENST00000495653 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
PTPN23-205ENST00000495653 DIP2CQ9Y2E4 1556 aa21.98■■□□□ 1.11
PTPN23-205ENST00000495653 ATP10AO60312 1499 aa21.97■■□□□ 1.11
PTPN23-205ENST00000495653 ADAMTSL3P82987 1691 aa21.97■■□□□ 1.11
PTPN23-205ENST00000495653 KIDINS220Q9ULH0 1771 aa21.97■■□□□ 1.11
PTPN23-205ENST00000495653 C9orf84Q5VXU9 1444 aa21.96■■□□□ 1.11
PTPN23-205ENST00000495653 CAMSAP2Q08AD1 1489 aa21.95■■□□□ 1.1
PTPN23-205ENST00000495653 MADDQ8WXG6 1647 aa21.92■■□□□ 1.1
PTPN23-205ENST00000495653 MBD5Q9P267 1494 aa21.92■■□□□ 1.1
PTPN23-205ENST00000495653 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
PTPN23-205ENST00000495653 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
PTPN23-205ENST00000495653 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
PTPN23-205ENST00000495653 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
PTPN23-205ENST00000495653 REREQ9P2R6 1566 aa21.89■■□□□ 1.09
PTPN23-205ENST00000495653 MLECQ14165 292 aa21.88■■□□□ 1.09
PTPN23-205ENST00000495653 RIMS1Q86UR5 1692 aaKnown RBP21.87■■□□□ 1.09
PTPN23-205ENST00000495653 CCDC141Q6ZP82 1450 aa21.85■■□□□ 1.09
PTPN23-205ENST00000495653 PTPRMP28827 1452 aa21.84■■□□□ 1.09
PTPN23-205ENST00000495653 MIA2Q96PC5 1412 aa21.84■■□□□ 1.09
PTPN23-205ENST00000495653 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
PTPN23-205ENST00000495653 ARHGEF5Q12774 1597 aa21.83■■□□□ 1.09
PTPN23-205ENST00000495653 AGLP35573 1532 aa21.81■■□□□ 1.08
PTPN23-205ENST00000495653 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
PTPN23-205ENST00000495653 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
PTPN23-205ENST00000495653 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
PTPN23-205ENST00000495653 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
PTPN23-205ENST00000495653 A2MP01023 1474 aa21.77■■□□□ 1.08
PTPN23-205ENST00000495653 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.08
PTPN23-205ENST00000495653 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
PTPN23-205ENST00000495653 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
PTPN23-205ENST00000495653 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
PTPN23-205ENST00000495653 MAST1Q9Y2H9 1570 aa21.72■■□□□ 1.07
PTPN23-205ENST00000495653 TSPY4P0CV99 314 aa21.71■■□□□ 1.07
PTPN23-205ENST00000495653 TSPY10P0CW01 314 aa21.71■■□□□ 1.07
PTPN23-205ENST00000495653 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
PTPN23-205ENST00000495653 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
PTPN23-205ENST00000495653 DNMT1P26358 1616 aaKnown RBP21.68■■□□□ 1.06
PTPN23-205ENST00000495653 ABCC5O15440 1437 aa21.67■■□□□ 1.06
PTPN23-205ENST00000495653 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
PTPN23-205ENST00000495653 DAPK1P53355 1430 aa21.65■■□□□ 1.06
PTPN23-205ENST00000495653 CEBPAP49715 358 aaPredicted RBP21.64■■□□□ 1.05
PTPN23-205ENST00000495653 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
PTPN23-205ENST00000495653 C3P01024 1663 aa21.63■■□□□ 1.05
PTPN23-205ENST00000495653 GGT6Q6P531 493 aa21.63■■□□□ 1.05
PTPN23-205ENST00000495653 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
PTPN23-205ENST00000495653 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
PTPN23-205ENST00000495653 CLTCQ00610 1675 aaKnown RBP21.62■■□□□ 1.05
PTPN23-205ENST00000495653 KIF3BO15066 747 aa21.6■■□□□ 1.05
PTPN23-205ENST00000495653 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
PTPN23-205ENST00000495653 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
PTPN23-205ENST00000495653 LMTK3Q96Q04 1460 aa21.58■■□□□ 1.04
PTPN23-205ENST00000495653 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
PTPN23-205ENST00000495653 DUOX2Q9NRD8 1548 aa21.55■■□□□ 1.04
PTPN23-205ENST00000495653 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
PTPN23-205ENST00000495653 KIF15Q9NS87 1388 aa21.55■■□□□ 1.04
PTPN23-205ENST00000495653 PREX1Q8TCU6 1659 aa21.54■■□□□ 1.04
PTPN23-205ENST00000495653 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
PTPN23-205ENST00000495653 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms