RNA–Protein interactions for RNA: ENST00000495653.1

PTPN23-205, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-205ENST00000495653 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
PTPN23-205ENST00000495653 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
PTPN23-205ENST00000495653 ABCC9O60706 1549 aa29.84■■■□□ 2.37
PTPN23-205ENST00000495653 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
PTPN23-205ENST00000495653 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
PTPN23-205ENST00000495653 NACADO15069 1562 aa28.58■■■□□ 2.17
PTPN23-205ENST00000495653 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
PTPN23-205ENST00000495653 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
PTPN23-205ENST00000495653 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
PTPN23-205ENST00000495653 UNC13AQ9UPW8 1703 aa28.07■■■□□ 2.08
PTPN23-205ENST00000495653 PABPN1Q86U42 306 aaKnown RBP eCLIP27.86■■■□□ 2.05
PTPN23-205ENST00000495653 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
PTPN23-205ENST00000495653 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
PTPN23-205ENST00000495653 DNAJC5BQ9UF47 199 aa27.43■■□□□ 1.98
PTPN23-205ENST00000495653 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
PTPN23-205ENST00000495653 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
PTPN23-205ENST00000495653 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
PTPN23-205ENST00000495653 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
PTPN23-205ENST00000495653 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
PTPN23-205ENST00000495653 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
PTPN23-205ENST00000495653 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
PTPN23-205ENST00000495653 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
PTPN23-205ENST00000495653 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
PTPN23-205ENST00000495653 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
PTPN23-205ENST00000495653 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
PTPN23-205ENST00000495653 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
PTPN23-205ENST00000495653 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
PTPN23-205ENST00000495653 WIZO95785 1651 aa26.09■■□□□ 1.77
PTPN23-205ENST00000495653 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
PTPN23-205ENST00000495653 NESP48681 1621 aa25.81■■□□□ 1.72
PTPN23-205ENST00000495653 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
PTPN23-205ENST00000495653 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
PTPN23-205ENST00000495653 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
PTPN23-205ENST00000495653 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
PTPN23-205ENST00000495653 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
PTPN23-205ENST00000495653 PDS5BQ9NTI5 1447 aa25.49■■□□□ 1.67
PTPN23-205ENST00000495653 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
PTPN23-205ENST00000495653 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
PTPN23-205ENST00000495653 CFTRP13569 1480 aa25.43■■□□□ 1.66
PTPN23-205ENST00000495653 CUX2O14529 1486 aa25.42■■□□□ 1.66
PTPN23-205ENST00000495653 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
PTPN23-205ENST00000495653 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
PTPN23-205ENST00000495653 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
PTPN23-205ENST00000495653 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
PTPN23-205ENST00000495653 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
PTPN23-205ENST00000495653 WDR62O43379 1518 aa25.2■■□□□ 1.62
PTPN23-205ENST00000495653 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
PTPN23-205ENST00000495653 TOPBP1Q92547 1522 aa24.92■■□□□ 1.58
PTPN23-205ENST00000495653 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
PTPN23-205ENST00000495653 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
PTPN23-205ENST00000495653 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
PTPN23-205ENST00000495653 CUX1P39880 1505 aa24.72■■□□□ 1.55
PTPN23-205ENST00000495653 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
PTPN23-205ENST00000495653 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
PTPN23-205ENST00000495653 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
PTPN23-205ENST00000495653 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
PTPN23-205ENST00000495653 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
PTPN23-205ENST00000495653 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
PTPN23-205ENST00000495653 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
PTPN23-205ENST00000495653 SOGA1O94964 1423 aa24.58■■□□□ 1.53
PTPN23-205ENST00000495653 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
PTPN23-205ENST00000495653 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
PTPN23-205ENST00000495653 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
PTPN23-205ENST00000495653 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
PTPN23-205ENST00000495653 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
PTPN23-205ENST00000495653 WDR97A6NE52 1622 aa24.47■■□□□ 1.51
PTPN23-205ENST00000495653 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
PTPN23-205ENST00000495653 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
PTPN23-205ENST00000495653 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
PTPN23-205ENST00000495653 CHD1O14646 1710 aa24.33■■□□□ 1.49
PTPN23-205ENST00000495653 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
PTPN23-205ENST00000495653 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
PTPN23-205ENST00000495653 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
PTPN23-205ENST00000495653 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
PTPN23-205ENST00000495653 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
PTPN23-205ENST00000495653 FBLN2P98095 1184 aa24.23■■□□□ 1.47
PTPN23-205ENST00000495653 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
PTPN23-205ENST00000495653 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
PTPN23-205ENST00000495653 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
PTPN23-205ENST00000495653 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
PTPN23-205ENST00000495653 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
PTPN23-205ENST00000495653 RIMBP3CA6NJZ7 1639 aa24.03■■□□□ 1.44
PTPN23-205ENST00000495653 RIMBP3BA6NNM3 1639 aa24.03■■□□□ 1.44
PTPN23-205ENST00000495653 RIMBP3Q9UFD9 1639 aa24.03■■□□□ 1.44
PTPN23-205ENST00000495653 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
PTPN23-205ENST00000495653 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
PTPN23-205ENST00000495653 GRIN2AQ12879 1464 aa24■■□□□ 1.43
PTPN23-205ENST00000495653 ARHGEF11O15085 1522 aa24■■□□□ 1.43
PTPN23-205ENST00000495653 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
PTPN23-205ENST00000495653 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
PTPN23-205ENST00000495653 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
PTPN23-205ENST00000495653 IGF1RP08069 1367 aa23.9■■□□□ 1.42
PTPN23-205ENST00000495653 NUP160Q12769 1436 aa23.88■■□□□ 1.41
PTPN23-205ENST00000495653 CUL7Q14999 1698 aa23.86■■□□□ 1.41
PTPN23-205ENST00000495653 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
PTPN23-205ENST00000495653 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
PTPN23-205ENST00000495653 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
PTPN23-205ENST00000495653 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
PTPN23-205ENST00000495653 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PTPN23-205ENST00000495653 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms