RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
ACTN4-207ENST00000495553 ARAP3Q8WWN8 1544 aa14.59□□□□□ -0.07
ACTN4-207ENST00000495553 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
ACTN4-207ENST00000495553 DENND4BO75064 1496 aaPredicted RBP14.57□□□□□ -0.08
ACTN4-207ENST00000495553 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
ACTN4-207ENST00000495553 PPARGC1BQ86YN6 1023 aaKnown RBP14.56□□□□□ -0.08
ACTN4-207ENST00000495553 GPATCH8Q9UKJ3 1502 aaKnown RBP14.56□□□□□ -0.08
ACTN4-207ENST00000495553 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
ACTN4-207ENST00000495553 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
ACTN4-207ENST00000495553 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
ACTN4-207ENST00000495553 MYO5CQ9NQX4 1742 aa14.54□□□□□ -0.08
ACTN4-207ENST00000495553 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
ACTN4-207ENST00000495553 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
ACTN4-207ENST00000495553 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
ACTN4-207ENST00000495553 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
ACTN4-207ENST00000495553 HNRNPMP52272 730 aaKnown RBP eCLIP14.49□□□□□ -0.095e-7■■■■□ 24.2
ACTN4-207ENST00000495553 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
ACTN4-207ENST00000495553 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
ACTN4-207ENST00000495553 ZNF518AQ6AHZ1 1483 aa14.47□□□□□ -0.09
ACTN4-207ENST00000495553 KIAA1107Q9UPP5 1409 aa14.47□□□□□ -0.09
ACTN4-207ENST00000495553 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.1
ACTN4-207ENST00000495553 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.1
ACTN4-207ENST00000495553 TRAPPC8Q9Y2L5 1435 aa14.45□□□□□ -0.1
ACTN4-207ENST00000495553 ABCC1P33527 1531 aa14.45□□□□□ -0.1
ACTN4-207ENST00000495553 MYOM3Q5VTT5 1437 aa14.44□□□□□ -0.1
ACTN4-207ENST00000495553 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
ACTN4-207ENST00000495553 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
ACTN4-207ENST00000495553 FRMPD1Q5SYB0 1578 aa14.43□□□□□ -0.1
ACTN4-207ENST00000495553 SAMD9LQ8IVG5 1584 aa14.43□□□□□ -0.1
ACTN4-207ENST00000495553 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
ACTN4-207ENST00000495553 SPAG9O60271 1321 aaKnown RBP14.42□□□□□ -0.1
ACTN4-207ENST00000495553 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
ACTN4-207ENST00000495553 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
ACTN4-207ENST00000495553 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
ACTN4-207ENST00000495553 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
ACTN4-207ENST00000495553 ZMYM4Q5VZL5 1548 aa14.41□□□□□ -0.1
ACTN4-207ENST00000495553 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
ACTN4-207ENST00000495553 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
ACTN4-207ENST00000495553 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
ACTN4-207ENST00000495553 CAMSAP2Q08AD1 1489 aa14.4□□□□□ -0.1
ACTN4-207ENST00000495553 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
ACTN4-207ENST00000495553 TSPY4P0CV99 314 aa14.39□□□□□ -0.11
ACTN4-207ENST00000495553 TSPY10P0CW01 314 aa14.39□□□□□ -0.11
ACTN4-207ENST00000495553 FGD6Q6ZV73 1430 aa14.39□□□□□ -0.11
ACTN4-207ENST00000495553 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
ACTN4-207ENST00000495553 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
ACTN4-207ENST00000495553 KDM5CP41229 1560 aa14.38□□□□□ -0.11
ACTN4-207ENST00000495553 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
ACTN4-207ENST00000495553 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
ACTN4-207ENST00000495553 ATP10AO60312 1499 aa14.37□□□□□ -0.11
ACTN4-207ENST00000495553 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
ACTN4-207ENST00000495553 CCDC141Q6ZP82 1450 aa14.36□□□□□ -0.11
ACTN4-207ENST00000495553 KDM4FA0A1W2PPD8 638 aa14.35□□□□□ -0.11
ACTN4-207ENST00000495553 AEBP2Q6ZN18 517 aaPredicted RBP14.35□□□□□ -0.11
ACTN4-207ENST00000495553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.116e-6■■■□□ 15.6
ACTN4-207ENST00000495553 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
ACTN4-207ENST00000495553 C9orf84Q5VXU9 1444 aa14.34□□□□□ -0.11
ACTN4-207ENST00000495553 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
ACTN4-207ENST00000495553 MLECQ14165 292 aa14.32□□□□□ -0.12
ACTN4-207ENST00000495553 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
ACTN4-207ENST00000495553 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
ACTN4-207ENST00000495553 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
ACTN4-207ENST00000495553 ARHGEF5Q12774 1597 aa14.3□□□□□ -0.12
ACTN4-207ENST00000495553 DIP2CQ9Y2E4 1556 aa14.29□□□□□ -0.12
ACTN4-207ENST00000495553 ABCC5O15440 1437 aa14.28□□□□□ -0.12
ACTN4-207ENST00000495553 ITGAEP38570 1179 aa14.27□□□□□ -0.13
ACTN4-207ENST00000495553 CHIC2Q9UKJ5 165 aa14.27□□□□□ -0.13
ACTN4-207ENST00000495553 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
ACTN4-207ENST00000495553 ABCA6Q8N139 1617 aa14.26□□□□□ -0.13
ACTN4-207ENST00000495553 A2MP01023 1474 aa14.26□□□□□ -0.13
ACTN4-207ENST00000495553 DAPK1P53355 1430 aa14.26□□□□□ -0.13
ACTN4-207ENST00000495553 ESF1Q9H501 851 aaKnown RBP14.26□□□□□ -0.13
ACTN4-207ENST00000495553 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-207ENST00000495553 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
ACTN4-207ENST00000495553 PCGF6Q9BYE7 350 aa14.25□□□□□ -0.13
ACTN4-207ENST00000495553 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
ACTN4-207ENST00000495553 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
ACTN4-207ENST00000495553 KIF3BO15066 747 aa14.23□□□□□ -0.13
ACTN4-207ENST00000495553 GGT6Q6P531 493 aa14.23□□□□□ -0.13
ACTN4-207ENST00000495553 AGLP35573 1532 aa14.23□□□□□ -0.13
ACTN4-207ENST00000495553 SHANK2Q9UPX8 1470 aa14.23□□□□□ -0.13
ACTN4-207ENST00000495553 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
ACTN4-207ENST00000495553 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
ACTN4-207ENST00000495553 DNMT1P26358 1616 aaKnown RBP14.21□□□□□ -0.13
ACTN4-207ENST00000495553 MAST1Q9Y2H9 1570 aa14.21□□□□□ -0.14
ACTN4-207ENST00000495553 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
ACTN4-207ENST00000495553 BCORL1Q5H9F3 1711 aa14.2□□□□□ -0.14
ACTN4-207ENST00000495553 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
ACTN4-207ENST00000495553 SIGLEC1Q9BZZ2 1709 aa14.18□□□□□ -0.14
ACTN4-207ENST00000495553 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
ACTN4-207ENST00000495553 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
ACTN4-207ENST00000495553 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
ACTN4-207ENST00000495553 PTPRMP28827 1452 aa14.17□□□□□ -0.14
ACTN4-207ENST00000495553 ADGBQ8N7X0 1667 aa14.17□□□□□ -0.14
ACTN4-207ENST00000495553 ROCK1Q13464 1354 aa14.16□□□□□ -0.14
ACTN4-207ENST00000495553 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
ACTN4-207ENST00000495553 DUOX2Q9NRD8 1548 aa14.15□□□□□ -0.14
ACTN4-207ENST00000495553 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
ACTN4-207ENST00000495553 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
ACTN4-207ENST00000495553 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms