RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 TTC37Q6PGP7 1564 aa29.74■■■□□ 2.35
LINC01558-202ENST00000495520 GPATCH8Q9UKJ3 1502 aaKnown RBP29.72■■■□□ 2.35
LINC01558-202ENST00000495520 HFM1A2PYH4 1435 aa29.72■■■□□ 2.35
LINC01558-202ENST00000495520 ITSN2Q9NZM3 1697 aa29.71■■■□□ 2.35
LINC01558-202ENST00000495520 CDC42BPAQ5VT25 1732 aa29.69■■■□□ 2.34
LINC01558-202ENST00000495520 CFDP1Q9UEE9 299 aaPredicted RBP29.66■■■□□ 2.34
LINC01558-202ENST00000495520 AKNAQ7Z591 1439 aa29.65■■■□□ 2.34
LINC01558-202ENST00000495520 MYO5CQ9NQX4 1742 aa29.64■■■□□ 2.34
LINC01558-202ENST00000495520 ABCA9Q8IUA7 1624 aa29.64■■■□□ 2.33
LINC01558-202ENST00000495520 NAIPQ13075 1403 aa29.63■■■□□ 2.33
LINC01558-202ENST00000495520 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
LINC01558-202ENST00000495520 ZNF777Q9ULD5 760 aaPredicted RBP29.6■■■□□ 2.33
LINC01558-202ENST00000495520 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
LINC01558-202ENST00000495520 ARHGAP5Q13017 1502 aa29.58■■■□□ 2.33
LINC01558-202ENST00000495520 ZNF644Q9H582 1327 aaPredicted RBP29.57■■■□□ 2.32
LINC01558-202ENST00000495520 DNMT1P26358 1616 aaKnown RBP29.57■■■□□ 2.32
LINC01558-202ENST00000495520 ABCC5O15440 1437 aa29.57■■■□□ 2.32
LINC01558-202ENST00000495520 PLCH2O75038 1416 aa29.57■■■□□ 2.32
LINC01558-202ENST00000495520 DAPK1P53355 1430 aa29.57■■■□□ 2.32
LINC01558-202ENST00000495520 ROCK1Q13464 1354 aa29.55■■■□□ 2.32
LINC01558-202ENST00000495520 CAMSAP2Q08AD1 1489 aa29.54■■■□□ 2.32
LINC01558-202ENST00000495520 DIP2BQ9P265 1576 aa29.53■■■□□ 2.32
LINC01558-202ENST00000495520 FAM69CQ0P6D2 419 aa29.5■■■□□ 2.31
LINC01558-202ENST00000495520 CD109Q6YHK3 1445 aa29.5■■■□□ 2.31
LINC01558-202ENST00000495520 GCC2Q8IWJ2 1684 aa29.5■■■□□ 2.31
LINC01558-202ENST00000495520 GLI2P10070 1586 aa29.5■■■□□ 2.31
LINC01558-202ENST00000495520 SAMD9LQ8IVG5 1584 aa29.48■■■□□ 2.31
LINC01558-202ENST00000495520 ARAP3Q8WWN8 1544 aa29.48■■■□□ 2.31
LINC01558-202ENST00000495520 EFCAB2Q5VUJ9 269 aa29.47■■■□□ 2.31
LINC01558-202ENST00000495520 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
LINC01558-202ENST00000495520 MAP3K4Q9Y6R4 1608 aa29.44■■■□□ 2.3
LINC01558-202ENST00000495520 FANCAO15360 1455 aa29.44■■■□□ 2.3
LINC01558-202ENST00000495520 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
LINC01558-202ENST00000495520 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.3
LINC01558-202ENST00000495520 KIF13AQ9H1H9 1805 aa29.39■■■□□ 2.29
LINC01558-202ENST00000495520 ADGRL2O95490 1459 aa29.39■■■□□ 2.29
LINC01558-202ENST00000495520 HNRNPMP52272 730 aaKnown RBP eCLIP29.38■■■□□ 2.29
LINC01558-202ENST00000495520 SYCP2Q9BX26 1530 aa29.38■■■□□ 2.29
LINC01558-202ENST00000495520 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
LINC01558-202ENST00000495520 CROCC2H7BZ55 1655 aa29.36■■■□□ 2.29
LINC01558-202ENST00000495520 ABCC1P33527 1531 aa29.34■■■□□ 2.29
LINC01558-202ENST00000495520 NCOA1Q15788 1441 aa29.34■■■□□ 2.29
LINC01558-202ENST00000495520 SHANK2Q9UPX8 1470 aa29.34■■■□□ 2.29
LINC01558-202ENST00000495520 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
LINC01558-202ENST00000495520 MBD5Q9P267 1494 aa29.33■■■□□ 2.29
LINC01558-202ENST00000495520 ARHGEF5Q12774 1597 aa29.33■■■□□ 2.29
LINC01558-202ENST00000495520 CFAP74Q9C0B2 1584 aa29.33■■■□□ 2.29
LINC01558-202ENST00000495520 KDM6BO15054 1643 aa29.33■■■□□ 2.29
LINC01558-202ENST00000495520 ARHGEF12Q9NZN5 1544 aa29.32■■■□□ 2.28
LINC01558-202ENST00000495520 TSPOAP1O95153 1857 aa29.32■■■□□ 2.28
LINC01558-202ENST00000495520 ADGBQ8N7X0 1667 aa29.31■■■□□ 2.28
LINC01558-202ENST00000495520 ADGRL1O94910 1474 aa29.31■■■□□ 2.28
LINC01558-202ENST00000495520 CCDC141Q6ZP82 1450 aa29.29■■■□□ 2.28
LINC01558-202ENST00000495520 RSPH4AQ5TD94 716 aa29.28■■■□□ 2.28
LINC01558-202ENST00000495520 TIMELESSQ9UNS1 1208 aa29.27■■■□□ 2.28
LINC01558-202ENST00000495520 NEO1Q92859 1461 aa29.27■■■□□ 2.28
LINC01558-202ENST00000495520 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
LINC01558-202ENST00000495520 TRHP20396 242 aaPredicted RBP29.25■■■□□ 2.27
LINC01558-202ENST00000495520 SCAPERQ9BY12 1400 aa29.25■■■□□ 2.27
LINC01558-202ENST00000495520 ANKRD30AQ9BXX3 1397 aa29.25■■■□□ 2.27
LINC01558-202ENST00000495520 TSPY4P0CV99 314 aa29.24■■■□□ 2.27
LINC01558-202ENST00000495520 TSPY10P0CW01 314 aa29.24■■■□□ 2.27
LINC01558-202ENST00000495520 TRAPPC8Q9Y2L5 1435 aa29.23■■■□□ 2.27
LINC01558-202ENST00000495520 C9orf84Q5VXU9 1444 aa29.22■■■□□ 2.27
LINC01558-202ENST00000495520 TEX14Q8IWB6 1497 aa29.22■■■□□ 2.27
LINC01558-202ENST00000495520 DENND4BO75064 1496 aaPredicted RBP29.21■■■□□ 2.27
LINC01558-202ENST00000495520 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
LINC01558-202ENST00000495520 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
LINC01558-202ENST00000495520 AFAP1Q8N556 730 aa29.18■■■□□ 2.26
LINC01558-202ENST00000495520 TRIM52Q96A61 297 aa29.15■■■□□ 2.26
LINC01558-202ENST00000495520 MPHOSPH9Q99550 1183 aa29.15■■■□□ 2.26
LINC01558-202ENST00000495520 MAST1Q9Y2H9 1570 aa29.13■■■□□ 2.25
LINC01558-202ENST00000495520 POGZQ7Z3K3 1410 aa29.12■■■□□ 2.25
LINC01558-202ENST00000495520 ZNF518AQ6AHZ1 1483 aa29.12■■■□□ 2.25
LINC01558-202ENST00000495520 ANKRD50Q9ULJ7 1429 aa29.11■■■□□ 2.25
LINC01558-202ENST00000495520 SPAG9O60271 1321 aaKnown RBP29.1■■■□□ 2.25
LINC01558-202ENST00000495520 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
LINC01558-202ENST00000495520 RAPGEF3O95398 923 aa29.08■■■□□ 2.25
LINC01558-202ENST00000495520 MYT1LQ9UL68 1186 aa29.07■■■□□ 2.24
LINC01558-202ENST00000495520 ZFYVE16Q7Z3T8 1539 aa29.05■■■□□ 2.24
LINC01558-202ENST00000495520 KIF15Q9NS87 1388 aa29.05■■■□□ 2.24
LINC01558-202ENST00000495520 PZPP20742 1482 aa29.04■■■□□ 2.24
LINC01558-202ENST00000495520 KDM5CP41229 1560 aa29.04■■■□□ 2.24
LINC01558-202ENST00000495520 INO80Q9ULG1 1556 aaPredicted RBP29.03■■■□□ 2.24
LINC01558-202ENST00000495520 RTEL1-TNFRSF6BF6WH68 1400 aa29.03■■■□□ 2.24
LINC01558-202ENST00000495520 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
LINC01558-202ENST00000495520 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
LINC01558-202ENST00000495520 PLXNC1O60486 1568 aa29.02■■■□□ 2.24
LINC01558-202ENST00000495520 PPP1R15AO75807 674 aaPredicted RBP29■■■□□ 2.23
LINC01558-202ENST00000495520 ANKRD30BQ9BXX2 1392 aa28.99■■■□□ 2.23
LINC01558-202ENST00000495520 FRMPD1Q5SYB0 1578 aa28.99■■■□□ 2.23
LINC01558-202ENST00000495520 KDM5DQ9BY66 1539 aa28.98■■■□□ 2.23
LINC01558-202ENST00000495520 HECW2Q9P2P5 1572 aa28.97■■■□□ 2.23
LINC01558-202ENST00000495520 SLC4A1APQ9BWU0 796 aaKnown RBP28.96■■■□□ 2.23
LINC01558-202ENST00000495520 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
LINC01558-202ENST00000495520 MLH3Q9UHC1 1453 aa28.95■■■□□ 2.23
LINC01558-202ENST00000495520 COL17A1Q9UMD9 1497 aaPredicted RBP28.95■■■□□ 2.23
LINC01558-202ENST00000495520 TONSLQ96HA7 1378 aa28.95■■■□□ 2.22
LINC01558-202ENST00000495520 DUOX2Q9NRD8 1548 aa28.92■■■□□ 2.22
LINC01558-202ENST00000495520 DIEXFQ68CQ4 756 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms