RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 CASKIN1Q8WXD9 1431 aa29.62■■■□□ 2.33
YIPF4-204ENST00000495355 SCAPERQ9BY12 1400 aa29.6■■■□□ 2.33
YIPF4-204ENST00000495355 ZFYVE16Q7Z3T8 1539 aa29.59■■■□□ 2.33
YIPF4-204ENST00000495355 CDK11AQ9UQ88 783 aaPredicted RBP29.57■■■□□ 2.32
YIPF4-204ENST00000495355 MAGI2Q86UL8 1455 aa29.55■■■□□ 2.32
YIPF4-204ENST00000495355 CCDC18Q5T9S5 1454 aa29.53■■■□□ 2.32
YIPF4-204ENST00000495355 ARID4BQ4LE39 1312 aaPredicted RBP29.52■■■□□ 2.32
YIPF4-204ENST00000495355 CDC42BPBQ9Y5S2 1711 aa29.52■■■□□ 2.32
YIPF4-204ENST00000495355 CLIP1P30622 1438 aa29.52■■■□□ 2.32
YIPF4-204ENST00000495355 EFCAB2Q5VUJ9 269 aa29.51■■■□□ 2.31
YIPF4-204ENST00000495355 FYCO1Q9BQS8 1478 aa29.5■■■□□ 2.31
YIPF4-204ENST00000495355 ARHGAP5Q13017 1502 aa29.5■■■□□ 2.31
YIPF4-204ENST00000495355 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
YIPF4-204ENST00000495355 RIMS1Q86UR5 1692 aaKnown RBP29.49■■■□□ 2.31
YIPF4-204ENST00000495355 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
YIPF4-204ENST00000495355 KDM5CP41229 1560 aa29.46■■■□□ 2.31
YIPF4-204ENST00000495355 ZNF518AQ6AHZ1 1483 aa29.42■■■□□ 2.3
YIPF4-204ENST00000495355 CDC42BPAQ5VT25 1732 aa29.41■■■□□ 2.3
YIPF4-204ENST00000495355 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
YIPF4-204ENST00000495355 ATP10AO60312 1499 aa29.4■■■□□ 2.3
YIPF4-204ENST00000495355 ABCC1P33527 1531 aa29.39■■■□□ 2.3
YIPF4-204ENST00000495355 AFAP1Q8N556 730 aa29.38■■■□□ 2.29
YIPF4-204ENST00000495355 C9orf84Q5VXU9 1444 aa29.37■■■□□ 2.29
YIPF4-204ENST00000495355 LMTK3Q96Q04 1460 aa29.36■■■□□ 2.29
YIPF4-204ENST00000495355 ITSN2Q9NZM3 1697 aa29.35■■■□□ 2.29
YIPF4-204ENST00000495355 DIP2CQ9Y2E4 1556 aa29.35■■■□□ 2.29
YIPF4-204ENST00000495355 FER1L4A9Z1Z3 1794 aa29.34■■■□□ 2.29
YIPF4-204ENST00000495355 TRAPPC8Q9Y2L5 1435 aa29.34■■■□□ 2.29
YIPF4-204ENST00000495355 ABCA6Q8N139 1617 aa29.32■■■□□ 2.28
YIPF4-204ENST00000495355 MLECQ14165 292 aa29.31■■■□□ 2.28
YIPF4-204ENST00000495355 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
YIPF4-204ENST00000495355 SAMD9LQ8IVG5 1584 aa29.28■■■□□ 2.28
YIPF4-204ENST00000495355 REREQ9P2R6 1566 aa29.28■■■□□ 2.28
YIPF4-204ENST00000495355 ILDR1Q86SU0 546 aaPredicted RBP29.28■■■□□ 2.28
YIPF4-204ENST00000495355 GPATCH8Q9UKJ3 1502 aaKnown RBP29.28■■■□□ 2.28
YIPF4-204ENST00000495355 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
YIPF4-204ENST00000495355 CEP162Q5TB80 1403 aa29.23■■■□□ 2.27
YIPF4-204ENST00000495355 PLPPR3Q6T4P5 718 aa29.2■■■□□ 2.26
YIPF4-204ENST00000495355 SYCP2Q9BX26 1530 aa29.2■■■□□ 2.26
YIPF4-204ENST00000495355 AGLP35573 1532 aa29.16■■■□□ 2.26
YIPF4-204ENST00000495355 TIAM1Q13009 1591 aa29.13■■■□□ 2.25
YIPF4-204ENST00000495355 HSPA2P54652 639 aa29.13■■■□□ 2.25
YIPF4-204ENST00000495355 ZNF777Q9ULD5 760 aaPredicted RBP29.13■■■□□ 2.25
YIPF4-204ENST00000495355 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
YIPF4-204ENST00000495355 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
YIPF4-204ENST00000495355 EHBP1L1Q8N3D4 1523 aa29.11■■■□□ 2.25
YIPF4-204ENST00000495355 CEBPAP49715 358 aaPredicted RBP29.11■■■□□ 2.25
YIPF4-204ENST00000495355 HNRNPMP52272 730 aaKnown RBP eCLIP29.09■■■□□ 2.25
YIPF4-204ENST00000495355 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
YIPF4-204ENST00000495355 KIAA1107Q9UPP5 1409 aa29.09■■■□□ 2.25
YIPF4-204ENST00000495355 INO80Q9ULG1 1556 aaPredicted RBP29.08■■■□□ 2.25
YIPF4-204ENST00000495355 PREX1Q8TCU6 1659 aa29.07■■■□□ 2.24
YIPF4-204ENST00000495355 CFDP1Q9UEE9 299 aaPredicted RBP29.06■■■□□ 2.24
YIPF4-204ENST00000495355 C3P01024 1663 aa29.05■■■□□ 2.24
YIPF4-204ENST00000495355 PLEKHH2Q8IVE3 1493 aa29.04■■■□□ 2.24
YIPF4-204ENST00000495355 ATP7AQ04656 1500 aa29.04■■■□□ 2.24
YIPF4-204ENST00000495355 PLXNC1O60486 1568 aa29.01■■■□□ 2.24
YIPF4-204ENST00000495355 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
YIPF4-204ENST00000495355 ZNF644Q9H582 1327 aaPredicted RBP29.01■■■□□ 2.23
YIPF4-204ENST00000495355 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.23
YIPF4-204ENST00000495355 MBD5Q9P267 1494 aa29■■■□□ 2.23
YIPF4-204ENST00000495355 SUPT6HQ7KZ85 1726 aaKnown RBP28.97■■■□□ 2.23
YIPF4-204ENST00000495355 PHF23Q9BUL5 403 aaPredicted RBP28.97■■■□□ 2.23
YIPF4-204ENST00000495355 NCOA2Q15596 1464 aa28.95■■■□□ 2.22
YIPF4-204ENST00000495355 A2MP01023 1474 aa28.92■■■□□ 2.22
YIPF4-204ENST00000495355 SETD1BQ9UPS6 1966 aaKnown RBP28.92■■■□□ 2.22
YIPF4-204ENST00000495355 VPS8Q8N3P4 1428 aa28.92■■■□□ 2.22
YIPF4-204ENST00000495355 STRCQ7RTU9 1775 aa28.91■■■□□ 2.22
YIPF4-204ENST00000495355 UHRF1BP1Q6BDS2 1440 aa28.9■■■□□ 2.22
YIPF4-204ENST00000495355 MROH2AA6NES4 1674 aa28.89■■■□□ 2.22
YIPF4-204ENST00000495355 CNTLNQ9NXG0 1405 aa28.89■■■□□ 2.22
YIPF4-204ENST00000495355 ADGBQ8N7X0 1667 aa28.87■■■□□ 2.21
YIPF4-204ENST00000495355 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
YIPF4-204ENST00000495355 CAMSAP2Q08AD1 1489 aa28.85■■■□□ 2.21
YIPF4-204ENST00000495355 LRRC9Q6ZRR7 1453 aa28.84■■■□□ 2.21
YIPF4-204ENST00000495355 CLTCQ00610 1675 aaKnown RBP28.83■■■□□ 2.21
YIPF4-204ENST00000495355 RTEL1-TNFRSF6BF6WH68 1400 aa28.83■■■□□ 2.21
YIPF4-204ENST00000495355 ESF1Q9H501 851 aaKnown RBP28.81■■■□□ 2.2
YIPF4-204ENST00000495355 CCDC141Q6ZP82 1450 aa28.8■■■□□ 2.2
YIPF4-204ENST00000495355 ZMYM3Q14202 1370 aa28.8■■■□□ 2.2
YIPF4-204ENST00000495355 NPATQ14207 1427 aa28.77■■■□□ 2.2
YIPF4-204ENST00000495355 MAP3K1Q13233 1512 aa28.76■■■□□ 2.19
YIPF4-204ENST00000495355 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
YIPF4-204ENST00000495355 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
YIPF4-204ENST00000495355 DHX29Q7Z478 1369 aaKnown RBP28.74■■■□□ 2.19
YIPF4-204ENST00000495355 GGT6Q6P531 493 aa28.73■■■□□ 2.19
YIPF4-204ENST00000495355 PTPRKQ15262 1439 aa28.72■■■□□ 2.19
YIPF4-204ENST00000495355 NCOA1Q15788 1441 aa28.69■■■□□ 2.18
YIPF4-204ENST00000495355 MYO3AQ8NEV4 1616 aa28.69■■■□□ 2.18
YIPF4-204ENST00000495355 ZNF142P52746 1687 aaPredicted RBP28.67■■■□□ 2.18
YIPF4-204ENST00000495355 CERKQ8TCT0 537 aa28.67■■■□□ 2.18
YIPF4-204ENST00000495355 PTPRTO14522 1441 aa28.66■■■□□ 2.18
YIPF4-204ENST00000495355 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
YIPF4-204ENST00000495355 RSPH4AQ5TD94 716 aa28.64■■■□□ 2.18
YIPF4-204ENST00000495355 PPP6R1Q9UPN7 881 aa28.64■■■□□ 2.18
YIPF4-204ENST00000495355 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
YIPF4-204ENST00000495355 MYOM3Q5VTT5 1437 aa28.62■■■□□ 2.17
YIPF4-204ENST00000495355 DMRT2Q9Y5R5 561 aa28.62■■■□□ 2.17
YIPF4-204ENST00000495355 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
YIPF4-204ENST00000495355 KIF3BO15066 747 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms