RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
FDPS-219ENST00000495308 RICTORQ6R327 1708 aa21.43■■□□□ 1.02
FDPS-219ENST00000495308 FRMPD1Q5SYB0 1578 aa21.42■■□□□ 1.02
FDPS-219ENST00000495308 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
FDPS-219ENST00000495308 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.02
FDPS-219ENST00000495308 ADGRL1O94910 1474 aa21.39■■□□□ 1.02
FDPS-219ENST00000495308 KANK4Q5T7N3 995 aaPredicted RBP21.39■■□□□ 1.01
FDPS-219ENST00000495308 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
FDPS-219ENST00000495308 EFCAB2Q5VUJ9 269 aa21.38■■□□□ 1.01
FDPS-219ENST00000495308 CCNB3Q8WWL7 1395 aa21.37■■□□□ 1.01
FDPS-219ENST00000495308 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
FDPS-219ENST00000495308 APLP2Q06481 763 aa21.36■■□□□ 1.01
FDPS-219ENST00000495308 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
FDPS-219ENST00000495308 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
FDPS-219ENST00000495308 SCAPERQ9BY12 1400 aa21.35■■□□□ 1.01
FDPS-219ENST00000495308 ABCC1P33527 1531 aa21.34■■□□□ 1.01
FDPS-219ENST00000495308 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
FDPS-219ENST00000495308 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
FDPS-219ENST00000495308 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
FDPS-219ENST00000495308 ZMYM4Q5VZL5 1548 aa21.29■■□□□ 1
FDPS-219ENST00000495308 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
FDPS-219ENST00000495308 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
FDPS-219ENST00000495308 ZNF518AQ6AHZ1 1483 aa21.26■□□□□ 0.99
FDPS-219ENST00000495308 ARHGEF40Q8TER5 1519 aa21.25■□□□□ 0.99
FDPS-219ENST00000495308 KDM5CP41229 1560 aa21.25■□□□□ 0.99
FDPS-219ENST00000495308 TRAPPC8Q9Y2L5 1435 aa21.23■□□□□ 0.99
FDPS-219ENST00000495308 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
FDPS-219ENST00000495308 HECW2Q9P2P5 1572 aa21.23■□□□□ 0.99
FDPS-219ENST00000495308 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
FDPS-219ENST00000495308 ZFYVE16Q7Z3T8 1539 aa21.22■□□□□ 0.99
FDPS-219ENST00000495308 MYOM3Q5VTT5 1437 aa21.21■□□□□ 0.99
FDPS-219ENST00000495308 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
FDPS-219ENST00000495308 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
FDPS-219ENST00000495308 YEATS2Q9ULM3 1422 aa21.2■□□□□ 0.98
FDPS-219ENST00000495308 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
FDPS-219ENST00000495308 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
FDPS-219ENST00000495308 MAGI2Q86UL8 1455 aa21.18■□□□□ 0.98
FDPS-219ENST00000495308 SIGLEC1Q9BZZ2 1709 aa21.18■□□□□ 0.98
FDPS-219ENST00000495308 ABCA6Q8N139 1617 aa21.17■□□□□ 0.98
FDPS-219ENST00000495308 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
FDPS-219ENST00000495308 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
FDPS-219ENST00000495308 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
FDPS-219ENST00000495308 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
FDPS-219ENST00000495308 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
FDPS-219ENST00000495308 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
FDPS-219ENST00000495308 MIA2Q96PC5 1412 aa21.13■□□□□ 0.97
FDPS-219ENST00000495308 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
FDPS-219ENST00000495308 MYT1LQ9UL68 1186 aa21.12■□□□□ 0.97
FDPS-219ENST00000495308 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
FDPS-219ENST00000495308 ATP7AQ04656 1500 aa21.11■□□□□ 0.97
FDPS-219ENST00000495308 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
FDPS-219ENST00000495308 CCDC141Q6ZP82 1450 aa21.09■□□□□ 0.97
FDPS-219ENST00000495308 ATP10AO60312 1499 aa21.07■□□□□ 0.96
FDPS-219ENST00000495308 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
FDPS-219ENST00000495308 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
FDPS-219ENST00000495308 C9orf84Q5VXU9 1444 aa21.07■□□□□ 0.96
FDPS-219ENST00000495308 CROCC2H7BZ55 1655 aa21.07■□□□□ 0.96
FDPS-219ENST00000495308 KDM4FA0A1W2PPD8 638 aa21.05■□□□□ 0.96
FDPS-219ENST00000495308 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
FDPS-219ENST00000495308 ADGBQ8N7X0 1667 aa21.05■□□□□ 0.96
FDPS-219ENST00000495308 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
FDPS-219ENST00000495308 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
FDPS-219ENST00000495308 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
FDPS-219ENST00000495308 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.95
FDPS-219ENST00000495308 MAST1Q9Y2H9 1570 aa21.01■□□□□ 0.95
FDPS-219ENST00000495308 MADDQ8WXG6 1647 aa21■□□□□ 0.95
FDPS-219ENST00000495308 RTEL1-TNFRSF6BF6WH68 1400 aa20.98■□□□□ 0.95
FDPS-219ENST00000495308 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
FDPS-219ENST00000495308 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
FDPS-219ENST00000495308 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
FDPS-219ENST00000495308 RIMS1Q86UR5 1692 aaKnown RBP20.96■□□□□ 0.95
FDPS-219ENST00000495308 DAPK1P53355 1430 aa20.95■□□□□ 0.95
FDPS-219ENST00000495308 A2MP01023 1474 aa20.95■□□□□ 0.94
FDPS-219ENST00000495308 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.94
FDPS-219ENST00000495308 ABCC5O15440 1437 aa20.95■□□□□ 0.94
FDPS-219ENST00000495308 AGLP35573 1532 aa20.94■□□□□ 0.94
FDPS-219ENST00000495308 TSPY4P0CV99 314 aa20.94■□□□□ 0.94
FDPS-219ENST00000495308 TSPY10P0CW01 314 aa20.94■□□□□ 0.94
FDPS-219ENST00000495308 MLECQ14165 292 aa20.94■□□□□ 0.94
FDPS-219ENST00000495308 SHANK2Q9UPX8 1470 aa20.94■□□□□ 0.94
FDPS-219ENST00000495308 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
FDPS-219ENST00000495308 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
FDPS-219ENST00000495308 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
FDPS-219ENST00000495308 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
FDPS-219ENST00000495308 PTPRMP28827 1452 aa20.84■□□□□ 0.93
FDPS-219ENST00000495308 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
FDPS-219ENST00000495308 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
FDPS-219ENST00000495308 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
FDPS-219ENST00000495308 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
FDPS-219ENST00000495308 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
FDPS-219ENST00000495308 ADGRL2O95490 1459 aa20.81■□□□□ 0.92
FDPS-219ENST00000495308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.8■□□□□ 0.923e-6■□□□□ 10.4
FDPS-219ENST00000495308 ITGAEP38570 1179 aa20.79■□□□□ 0.92
FDPS-219ENST00000495308 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
FDPS-219ENST00000495308 ANKRD30AQ9BXX3 1397 aa20.79■□□□□ 0.92
FDPS-219ENST00000495308 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
FDPS-219ENST00000495308 C3P01024 1663 aa20.78■□□□□ 0.92
FDPS-219ENST00000495308 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
FDPS-219ENST00000495308 KIF3BO15066 747 aa20.77■□□□□ 0.92
FDPS-219ENST00000495308 GGT6Q6P531 493 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms