RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
PKP4-215ENST00000494945 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
PKP4-215ENST00000494945 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
PKP4-215ENST00000494945 ARHGAP5Q13017 1502 aa16.67■□□□□ 0.26
PKP4-215ENST00000494945 GCC2Q8IWJ2 1684 aa16.66■□□□□ 0.26
PKP4-215ENST00000494945 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
PKP4-215ENST00000494945 CFAP74Q9C0B2 1584 aa16.66■□□□□ 0.26
PKP4-215ENST00000494945 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
PKP4-215ENST00000494945 ARHGEF5Q12774 1597 aa16.65■□□□□ 0.26
PKP4-215ENST00000494945 GLI2P10070 1586 aa16.64■□□□□ 0.25
PKP4-215ENST00000494945 PLCH2O75038 1416 aa16.64■□□□□ 0.25
PKP4-215ENST00000494945 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
PKP4-215ENST00000494945 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
PKP4-215ENST00000494945 DIP2BQ9P265 1576 aa16.62■□□□□ 0.25
PKP4-215ENST00000494945 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
PKP4-215ENST00000494945 DAPK1P53355 1430 aa16.61■□□□□ 0.25
PKP4-215ENST00000494945 ABCC1P33527 1531 aa16.6■□□□□ 0.25
PKP4-215ENST00000494945 ITGAEP38570 1179 aa16.59■□□□□ 0.25
PKP4-215ENST00000494945 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.24
PKP4-215ENST00000494945 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
PKP4-215ENST00000494945 ABCC5O15440 1437 aa16.57■□□□□ 0.24
PKP4-215ENST00000494945 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
PKP4-215ENST00000494945 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
PKP4-215ENST00000494945 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
PKP4-215ENST00000494945 TSPOAP1O95153 1857 aa16.56■□□□□ 0.24
PKP4-215ENST00000494945 MAST1Q9Y2H9 1570 aa16.56■□□□□ 0.24
PKP4-215ENST00000494945 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
PKP4-215ENST00000494945 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
PKP4-215ENST00000494945 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
PKP4-215ENST00000494945 FANCAO15360 1455 aa16.54■□□□□ 0.24
PKP4-215ENST00000494945 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
PKP4-215ENST00000494945 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
PKP4-215ENST00000494945 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
PKP4-215ENST00000494945 PPRC1Q5VV67 1664 aaKnown RBP16.53■□□□□ 0.24
PKP4-215ENST00000494945 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
PKP4-215ENST00000494945 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
PKP4-215ENST00000494945 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
PKP4-215ENST00000494945 ROCK1Q13464 1354 aa16.52■□□□□ 0.24
PKP4-215ENST00000494945 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
PKP4-215ENST00000494945 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
PKP4-215ENST00000494945 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
PKP4-215ENST00000494945 ARHGEF12Q9NZN5 1544 aa16.5■□□□□ 0.23
PKP4-215ENST00000494945 NAIPQ13075 1403 aa16.49■□□□□ 0.23
PKP4-215ENST00000494945 NEO1Q92859 1461 aa16.48■□□□□ 0.23
PKP4-215ENST00000494945 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
PKP4-215ENST00000494945 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
PKP4-215ENST00000494945 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
PKP4-215ENST00000494945 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
PKP4-215ENST00000494945 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.23
PKP4-215ENST00000494945 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
PKP4-215ENST00000494945 HRCP23327 699 aa16.45■□□□□ 0.22
PKP4-215ENST00000494945 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
PKP4-215ENST00000494945 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
PKP4-215ENST00000494945 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
PKP4-215ENST00000494945 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
PKP4-215ENST00000494945 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
PKP4-215ENST00000494945 KDM6BO15054 1643 aa16.44■□□□□ 0.22
PKP4-215ENST00000494945 TEX14Q8IWB6 1497 aa16.43■□□□□ 0.22
PKP4-215ENST00000494945 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
PKP4-215ENST00000494945 FAM69CQ0P6D2 419 aa16.42■□□□□ 0.22
PKP4-215ENST00000494945 KDM5CP41229 1560 aa16.42■□□□□ 0.22
PKP4-215ENST00000494945 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
PKP4-215ENST00000494945 SCAPERQ9BY12 1400 aa16.41■□□□□ 0.22
PKP4-215ENST00000494945 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
PKP4-215ENST00000494945 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
PKP4-215ENST00000494945 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
PKP4-215ENST00000494945 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
PKP4-215ENST00000494945 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
PKP4-215ENST00000494945 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
PKP4-215ENST00000494945 HECW2Q9P2P5 1572 aa16.39■□□□□ 0.21
PKP4-215ENST00000494945 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
PKP4-215ENST00000494945 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
PKP4-215ENST00000494945 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
PKP4-215ENST00000494945 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
PKP4-215ENST00000494945 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
PKP4-215ENST00000494945 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
PKP4-215ENST00000494945 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
PKP4-215ENST00000494945 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
PKP4-215ENST00000494945 SPAG9O60271 1321 aaKnown RBP16.34■□□□□ 0.21
PKP4-215ENST00000494945 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
PKP4-215ENST00000494945 UNC13BO14795 1591 aa16.34■□□□□ 0.21
PKP4-215ENST00000494945 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.2
PKP4-215ENST00000494945 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
PKP4-215ENST00000494945 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
PKP4-215ENST00000494945 ABCA6Q8N139 1617 aa16.31■□□□□ 0.2
PKP4-215ENST00000494945 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
PKP4-215ENST00000494945 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
PKP4-215ENST00000494945 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
PKP4-215ENST00000494945 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
PKP4-215ENST00000494945 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
PKP4-215ENST00000494945 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
PKP4-215ENST00000494945 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.2
PKP4-215ENST00000494945 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
PKP4-215ENST00000494945 MAGI2Q86UL8 1455 aa16.25■□□□□ 0.19
PKP4-215ENST00000494945 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
PKP4-215ENST00000494945 PZPP20742 1482 aa16.22■□□□□ 0.19
PKP4-215ENST00000494945 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
PKP4-215ENST00000494945 A2MP01023 1474 aa16.22■□□□□ 0.19
PKP4-215ENST00000494945 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
PKP4-215ENST00000494945 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms