RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 ARHGAP5Q13017 1502 aa37.05■■■■□ 3.52
CLIC3-203ENST00000494426 RAPGEF3O95398 923 aa37.05■■■■□ 3.52
CLIC3-203ENST00000494426 FRMPD1Q5SYB0 1578 aa37.03■■■■□ 3.52
CLIC3-203ENST00000494426 GPATCH8Q9UKJ3 1502 aaKnown RBP37.01■■■■□ 3.52
CLIC3-203ENST00000494426 DENND4BO75064 1496 aaPredicted RBP37■■■■□ 3.51
CLIC3-203ENST00000494426 LRRC9Q6ZRR7 1453 aa37■■■■□ 3.51
CLIC3-203ENST00000494426 ADGRL1O94910 1474 aa36.99■■■■□ 3.51
CLIC3-203ENST00000494426 RICTORQ6R327 1708 aa36.99■■■■□ 3.51
CLIC3-203ENST00000494426 SCAPERQ9BY12 1400 aa36.96■■■■□ 3.51
CLIC3-203ENST00000494426 KANK4Q5T7N3 995 aaPredicted RBP36.96■■■■□ 3.51
CLIC3-203ENST00000494426 CCNB3Q8WWL7 1395 aa36.94■■■■□ 3.5
CLIC3-203ENST00000494426 SUPT6HQ7KZ85 1726 aaKnown RBP36.94■■■■□ 3.5
CLIC3-203ENST00000494426 NCOA2Q15596 1464 aa36.91■■■■□ 3.5
CLIC3-203ENST00000494426 POGZQ7Z3K3 1410 aa36.87■■■■□ 3.49
CLIC3-203ENST00000494426 APLP2Q06481 763 aa36.85■■■■□ 3.49
CLIC3-203ENST00000494426 SAMD9LQ8IVG5 1584 aa36.85■■■■□ 3.49
CLIC3-203ENST00000494426 ABCC1P33527 1531 aa36.85■■■■□ 3.49
CLIC3-203ENST00000494426 ARHGEF12Q9NZN5 1544 aa36.85■■■■□ 3.49
CLIC3-203ENST00000494426 CFDP1Q9UEE9 299 aaPredicted RBP36.84■■■■□ 3.49
CLIC3-203ENST00000494426 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
CLIC3-203ENST00000494426 ZMYM4Q5VZL5 1548 aa36.82■■■■□ 3.48
CLIC3-203ENST00000494426 ZNF777Q9ULD5 760 aaPredicted RBP36.82■■■■□ 3.48
CLIC3-203ENST00000494426 AFAP1Q8N556 730 aa36.77■■■■□ 3.48
CLIC3-203ENST00000494426 TRAPPC8Q9Y2L5 1435 aa36.76■■■■□ 3.47
CLIC3-203ENST00000494426 ZNF518AQ6AHZ1 1483 aa36.75■■■■□ 3.47
CLIC3-203ENST00000494426 KDM5CP41229 1560 aa36.74■■■■□ 3.47
CLIC3-203ENST00000494426 MAGI2Q86UL8 1455 aa36.72■■■■□ 3.47
CLIC3-203ENST00000494426 ZNF644Q9H582 1327 aaPredicted RBP36.72■■■■□ 3.47
CLIC3-203ENST00000494426 SYCP2Q9BX26 1530 aa36.71■■■■□ 3.47
CLIC3-203ENST00000494426 ARHGEF40Q8TER5 1519 aa36.7■■■■□ 3.47
CLIC3-203ENST00000494426 YEATS2Q9ULM3 1422 aa36.7■■■■□ 3.47
CLIC3-203ENST00000494426 KIAA1107Q9UPP5 1409 aa36.7■■■■□ 3.47
CLIC3-203ENST00000494426 HNRNPMP52272 730 aaKnown RBP eCLIP36.69■■■■□ 3.46
CLIC3-203ENST00000494426 ZFYVE16Q7Z3T8 1539 aa36.69■■■■□ 3.46
CLIC3-203ENST00000494426 PLEKHH2Q8IVE3 1493 aa36.69■■■■□ 3.46
CLIC3-203ENST00000494426 KDM4FA0A1W2PPD8 638 aa36.65■■■■□ 3.46
CLIC3-203ENST00000494426 HECW2Q9P2P5 1572 aa36.61■■■■□ 3.45
CLIC3-203ENST00000494426 MLH3Q9UHC1 1453 aa36.61■■■■□ 3.45
CLIC3-203ENST00000494426 MYOM3Q5VTT5 1437 aa36.6■■■■□ 3.45
CLIC3-203ENST00000494426 MBD5Q9P267 1494 aa36.6■■■■□ 3.45
CLIC3-203ENST00000494426 CAMSAP2Q08AD1 1489 aa36.59■■■■□ 3.45
CLIC3-203ENST00000494426 SIGLEC1Q9BZZ2 1709 aa36.56■■■■□ 3.44
CLIC3-203ENST00000494426 KIDINS220Q9ULH0 1771 aa36.55■■■■□ 3.44
CLIC3-203ENST00000494426 MIA2Q96PC5 1412 aa36.54■■■■□ 3.44
CLIC3-203ENST00000494426 ATP10AO60312 1499 aa36.54■■■■□ 3.44
CLIC3-203ENST00000494426 DIP2CQ9Y2E4 1556 aa36.52■■■■□ 3.44
CLIC3-203ENST00000494426 MYT1LQ9UL68 1186 aa36.51■■■■□ 3.44
CLIC3-203ENST00000494426 ABCA6Q8N139 1617 aa36.51■■■■□ 3.43
CLIC3-203ENST00000494426 SPAG9O60271 1321 aaKnown RBP36.49■■■■□ 3.43
CLIC3-203ENST00000494426 C9orf84Q5VXU9 1444 aa36.47■■■■□ 3.43
CLIC3-203ENST00000494426 INO80Q9ULG1 1556 aaPredicted RBP36.45■■■■□ 3.43
CLIC3-203ENST00000494426 ARID4BQ4LE39 1312 aaPredicted RBP36.45■■■■□ 3.43
CLIC3-203ENST00000494426 ARHGEF5Q12774 1597 aa36.44■■■■□ 3.42
CLIC3-203ENST00000494426 BCORL1Q5H9F3 1711 aa36.43■■■■□ 3.42
CLIC3-203ENST00000494426 ATP7AQ04656 1500 aa36.43■■■■□ 3.42
CLIC3-203ENST00000494426 CCDC141Q6ZP82 1450 aa36.42■■■■□ 3.42
CLIC3-203ENST00000494426 RSPH4AQ5TD94 716 aa36.41■■■■□ 3.42
CLIC3-203ENST00000494426 FGD6Q6ZV73 1430 aa36.41■■■■□ 3.42
CLIC3-203ENST00000494426 PTPN23Q9H3S7 1636 aa36.41■■■■□ 3.42
CLIC3-203ENST00000494426 REREQ9P2R6 1566 aa36.4■■■■□ 3.42
CLIC3-203ENST00000494426 ADAMTSL3P82987 1691 aa36.39■■■■□ 3.42
CLIC3-203ENST00000494426 PPARGC1BQ86YN6 1023 aaKnown RBP36.39■■■■□ 3.42
CLIC3-203ENST00000494426 RTEL1-TNFRSF6BF6WH68 1400 aa36.35■■■■□ 3.41
CLIC3-203ENST00000494426 TCOF1Q13428 1488 aaKnown RBP36.35■■■■□ 3.41
CLIC3-203ENST00000494426 AGLP35573 1532 aa36.29■■■■□ 3.4
CLIC3-203ENST00000494426 MLECQ14165 292 aa36.27■■■■□ 3.4
CLIC3-203ENST00000494426 MADDQ8WXG6 1647 aa36.26■■■■□ 3.4
CLIC3-203ENST00000494426 TSPY4P0CV99 314 aa36.26■■■■□ 3.4
CLIC3-203ENST00000494426 TSPY10P0CW01 314 aa36.26■■■■□ 3.4
CLIC3-203ENST00000494426 ADGBQ8N7X0 1667 aa36.26■■■■□ 3.39
CLIC3-203ENST00000494426 MAST1Q9Y2H9 1570 aa36.25■■■■□ 3.39
CLIC3-203ENST00000494426 A2MP01023 1474 aa36.24■■■■□ 3.39
CLIC3-203ENST00000494426 PLXNC1O60486 1568 aa36.23■■■■□ 3.39
CLIC3-203ENST00000494426 ABCC5O15440 1437 aa36.23■■■■□ 3.39
CLIC3-203ENST00000494426 DNMT1P26358 1616 aaKnown RBP36.2■■■■□ 3.39
CLIC3-203ENST00000494426 CROCC2H7BZ55 1655 aa36.19■■■■□ 3.38
CLIC3-203ENST00000494426 DAPK1P53355 1430 aa36.17■■■■□ 3.38
CLIC3-203ENST00000494426 RIMS1Q86UR5 1692 aaKnown RBP36.16■■■■□ 3.38
CLIC3-203ENST00000494426 FER1L4A9Z1Z3 1794 aa36.15■■■■□ 3.38
CLIC3-203ENST00000494426 PTPRMP28827 1452 aa36.15■■■■□ 3.38
CLIC3-203ENST00000494426 DHX29Q7Z478 1369 aaKnown RBP36.15■■■■□ 3.38
CLIC3-203ENST00000494426 FAM50AQ14320 339 aaKnown RBP36.14■■■■□ 3.38
CLIC3-203ENST00000494426 SHANK2Q9UPX8 1470 aa36.12■■■■□ 3.37
CLIC3-203ENST00000494426 CHIC2Q9UKJ5 165 aa36.01■■■■□ 3.36
CLIC3-203ENST00000494426 KIF3BO15066 747 aa35.98■■■■□ 3.35
CLIC3-203ENST00000494426 GGT6Q6P531 493 aa35.98■■■■□ 3.35
CLIC3-203ENST00000494426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.98■■■■□ 3.35
CLIC3-203ENST00000494426 PTPRKQ15262 1439 aa35.97■■■■□ 3.35
CLIC3-203ENST00000494426 RRP7BPQ9NSQ0 103 aa35.96■■■■□ 3.35
CLIC3-203ENST00000494426 RRBP1Q9P2E9 1410 aaKnown RBP35.96■■■■□ 3.35
CLIC3-203ENST00000494426 DUOX2Q9NRD8 1548 aa35.96■■■■□ 3.35
CLIC3-203ENST00000494426 KIF15Q9NS87 1388 aa35.95■■■■□ 3.35
CLIC3-203ENST00000494426 ADGRL2O95490 1459 aa35.93■■■■□ 3.34
CLIC3-203ENST00000494426 NCOA1Q15788 1441 aa35.93■■■■□ 3.34
CLIC3-203ENST00000494426 ANKRD30AQ9BXX3 1397 aa35.92■■■■□ 3.34
CLIC3-203ENST00000494426 PLPPR3Q6T4P5 718 aa35.92■■■■□ 3.34
CLIC3-203ENST00000494426 CEBPAP49715 358 aaPredicted RBP35.91■■■■□ 3.34
CLIC3-203ENST00000494426 EIF2AK4Q9P2K8 1649 aaKnown RBP35.9■■■■□ 3.34
CLIC3-203ENST00000494426 ESF1Q9H501 851 aaKnown RBP35.89■■■■□ 3.34
CLIC3-203ENST00000494426 CNTLNQ9NXG0 1405 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms