RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 C3orf67Q6ZVT6 689 aa14.48□□□□□ -0.09
MSL3-217ENST00000494268 CRISPLD2Q9H0B8 497 aa14.48□□□□□ -0.09
MSL3-217ENST00000494268 PDE4AP27815 886 aa14.47□□□□□ -0.09
MSL3-217ENST00000494268 LARP6Q9BRS8 491 aaKnown RBP14.47□□□□□ -0.09
MSL3-217ENST00000494268 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
MSL3-217ENST00000494268 C2orf72A6NCS6 295 aa14.44□□□□□ -0.1
MSL3-217ENST00000494268 LHX8Q68G74 356 aa14.44□□□□□ -0.1
MSL3-217ENST00000494268 GPHNQ9NQX3 736 aaPredicted RBP14.44□□□□□ -0.1
MSL3-217ENST00000494268 TMC2Q8TDI7 906 aa14.43□□□□□ -0.1
MSL3-217ENST00000494268 KIF3CO14782 793 aa14.42□□□□□ -0.1
MSL3-217ENST00000494268 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
MSL3-217ENST00000494268 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
MSL3-217ENST00000494268 DSG2Q14126 1118 aa14.38□□□□□ -0.11
MSL3-217ENST00000494268 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
MSL3-217ENST00000494268 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
MSL3-217ENST00000494268 MFSD10Q14728 455 aa14.37□□□□□ -0.11
MSL3-217ENST00000494268 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
MSL3-217ENST00000494268 FOXK1P85037 733 aa14.34□□□□□ -0.11
MSL3-217ENST00000494268 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
MSL3-217ENST00000494268 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.12
MSL3-217ENST00000494268 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
MSL3-217ENST00000494268 E2F4Q16254 413 aa14.26□□□□□ -0.13
MSL3-217ENST00000494268 CAMK2BQ13554 666 aa14.22□□□□□ -0.13
MSL3-217ENST00000494268 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
MSL3-217ENST00000494268 EMILIN3Q9NT22 766 aa14.2□□□□□ -0.14
MSL3-217ENST00000494268 HOXB3P14651 431 aaPredicted RBP14.15□□□□□ -0.14
MSL3-217ENST00000494268 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSL3-217ENST00000494268 P3H3Q8IVL6 736 aa14.14□□□□□ -0.15
MSL3-217ENST00000494268 SLC34A2O95436 690 aa14.11□□□□□ -0.15
MSL3-217ENST00000494268 DPYSL4O14531 572 aa14.1□□□□□ -0.15
MSL3-217ENST00000494268 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
MSL3-217ENST00000494268 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
MSL3-217ENST00000494268 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
MSL3-217ENST00000494268 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
MSL3-217ENST00000494268 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
MSL3-217ENST00000494268 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
MSL3-217ENST00000494268 SNPHO15079 494 aa14.05□□□□□ -0.16
MSL3-217ENST00000494268 PCDHGA4Q9Y5G9 962 aa14.05□□□□□ -0.16
MSL3-217ENST00000494268 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
MSL3-217ENST00000494268 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
MSL3-217ENST00000494268 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
MSL3-217ENST00000494268 TBC1D12O60347 775 aa14.01□□□□□ -0.17
MSL3-217ENST00000494268 GPR153Q6NV75 609 aa14□□□□□ -0.17
MSL3-217ENST00000494268 RIMBP2O15034 1052 aa13.98□□□□□ -0.17
MSL3-217ENST00000494268 SEMA3EO15041 775 aa13.97□□□□□ -0.17
MSL3-217ENST00000494268 EVI5O60447 810 aa13.97□□□□□ -0.17
MSL3-217ENST00000494268 NBR1Q14596 966 aa13.96□□□□□ -0.17
MSL3-217ENST00000494268 PDIA6Q15084 440 aa13.96□□□□□ -0.17
MSL3-217ENST00000494268 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
MSL3-217ENST00000494268 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
MSL3-217ENST00000494268 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
MSL3-217ENST00000494268 BCANQ96GW7 911 aa13.95□□□□□ -0.18
MSL3-217ENST00000494268 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
MSL3-217ENST00000494268 NUDT7P0C024 238 aa13.94□□□□□ -0.18
MSL3-217ENST00000494268 ST18O60284 1047 aa13.93□□□□□ -0.18
MSL3-217ENST00000494268 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
MSL3-217ENST00000494268 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
MSL3-217ENST00000494268 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
MSL3-217ENST00000494268 LCE2DQ5TA82 110 aaPredicted RBP13.87□□□□□ -0.19
MSL3-217ENST00000494268 TESPA1A2RU30 521 aaPredicted RBP13.86□□□□□ -0.19
MSL3-217ENST00000494268 DDX12PQ92771 950 aa13.86□□□□□ -0.19
MSL3-217ENST00000494268 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
MSL3-217ENST00000494268 PTGER2P43116 358 aa13.84□□□□□ -0.19
MSL3-217ENST00000494268 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
MSL3-217ENST00000494268 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
MSL3-217ENST00000494268 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
MSL3-217ENST00000494268 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
MSL3-217ENST00000494268 EMP3P54852 163 aa13.76□□□□□ -0.21
MSL3-217ENST00000494268 OSBPP22059 807 aa13.75□□□□□ -0.21
MSL3-217ENST00000494268 FOSBP53539 338 aa13.75□□□□□ -0.21
MSL3-217ENST00000494268 ZNF454Q8N9F8 522 aa13.75□□□□□ -0.21
MSL3-217ENST00000494268 PHF14O94880 888 aa13.74□□□□□ -0.21
MSL3-217ENST00000494268 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
MSL3-217ENST00000494268 ERBB3P21860 1342 aa13.73□□□□□ -0.21
MSL3-217ENST00000494268 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
MSL3-217ENST00000494268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
MSL3-217ENST00000494268 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
MSL3-217ENST00000494268 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
MSL3-217ENST00000494268 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
MSL3-217ENST00000494268 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
MSL3-217ENST00000494268 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
MSL3-217ENST00000494268 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
MSL3-217ENST00000494268 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
MSL3-217ENST00000494268 EPAS1Q99814 870 aa13.69□□□□□ -0.22
MSL3-217ENST00000494268 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
MSL3-217ENST00000494268 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
MSL3-217ENST00000494268 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
MSL3-217ENST00000494268 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
MSL3-217ENST00000494268 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
MSL3-217ENST00000494268 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
MSL3-217ENST00000494268 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
MSL3-217ENST00000494268 HS3ST6Q96QI5 342 aa13.65□□□□□ -0.22
MSL3-217ENST00000494268 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
MSL3-217ENST00000494268 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
MSL3-217ENST00000494268 MAP3K7O43318 606 aa13.62□□□□□ -0.23
MSL3-217ENST00000494268 TSR1Q2NL82 804 aaKnown RBP13.62□□□□□ -0.23
MSL3-217ENST00000494268 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
MSL3-217ENST00000494268 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
MSL3-217ENST00000494268 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
MSL3-217ENST00000494268 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms