RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SNPHO15079 494 aa5.76□□□□□ -1.49
LMNB1-207ENST00000494185 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
LMNB1-207ENST00000494185 MS4A4AQ96JQ5 239 aa5.75□□□□□ -1.49
LMNB1-207ENST00000494185 TMEM121BQ9BXQ6 578 aaPredicted RBP5.74□□□□□ -1.49
LMNB1-207ENST00000494185 PPP1R37O75864 691 aa5.73□□□□□ -1.49
LMNB1-207ENST00000494185 DDX27Q96GQ7 796 aaKnown RBP5.73□□□□□ -1.49
LMNB1-207ENST00000494185 DOK7Q18PE1 504 aa5.71□□□□□ -1.5
LMNB1-207ENST00000494185 SLAIN1Q8ND83 568 aa5.71□□□□□ -1.5
LMNB1-207ENST00000494185 GPHNQ9NQX3 736 aaPredicted RBP5.71□□□□□ -1.5
LMNB1-207ENST00000494185 KDM2AQ9Y2K7 1162 aa5.71□□□□□ -1.5
LMNB1-207ENST00000494185 POTEMA6NI47 508 aa5.7□□□□□ -1.5
LMNB1-207ENST00000494185 TBC1D12O60347 775 aa5.7□□□□□ -1.5
LMNB1-207ENST00000494185 DPY19L2Q6NUT2 758 aa5.7□□□□□ -1.5
LMNB1-207ENST00000494185 ZNF710Q8N1W2 664 aa5.69□□□□□ -1.5
LMNB1-207ENST00000494185 LARP6Q9BRS8 491 aaKnown RBP5.69□□□□□ -1.5
LMNB1-207ENST00000494185 POTEFA5A3E0 1075 aa5.68□□□□□ -1.5
LMNB1-207ENST00000494185 TULP1O00294 542 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-207ENST00000494185 FOXK1P85037 733 aa5.68□□□□□ -1.5
LMNB1-207ENST00000494185 PPP1R15BQ5SWA1 713 aa5.68□□□□□ -1.5
LMNB1-207ENST00000494185 CADPS2Q86UW7 1296 aa5.68□□□□□ -1.5
LMNB1-207ENST00000494185 CRISPLD2Q9H0B8 497 aa5.68□□□□□ -1.5
LMNB1-207ENST00000494185 POTEGQ6S5H5 508 aa5.67□□□□□ -1.5
LMNB1-207ENST00000494185 ZSWIM6Q9HCJ5 1215 aa5.66□□□□□ -1.5
LMNB1-207ENST00000494185 C2orf72A6NCS6 295 aa5.65□□□□□ -1.5
LMNB1-207ENST00000494185 MFSD10Q14728 455 aa5.65□□□□□ -1.5
LMNB1-207ENST00000494185 E2F4Q16254 413 aa5.65□□□□□ -1.5
LMNB1-207ENST00000494185 PCDH10Q9P2E7 1040 aa5.64□□□□□ -1.51
LMNB1-207ENST00000494185 NBR1Q14596 966 aa5.63□□□□□ -1.51
LMNB1-207ENST00000494185 PLPP6Q8IY26 295 aa5.63□□□□□ -1.51
LMNB1-207ENST00000494185 NCKAP5LQ9HCH0 1330 aa5.63□□□□□ -1.51
LMNB1-207ENST00000494185 KIF3CO14782 793 aa5.62□□□□□ -1.51
LMNB1-207ENST00000494185 PSDA5PKW4 1024 aaPredicted RBP5.61□□□□□ -1.51
LMNB1-207ENST00000494185 SLC34A2O95436 690 aa5.61□□□□□ -1.51
LMNB1-207ENST00000494185 MAP3K9P80192 1104 aa5.61□□□□□ -1.51
LMNB1-207ENST00000494185 DSG2Q14126 1118 aa5.61□□□□□ -1.51
LMNB1-207ENST00000494185 BCANQ96GW7 911 aa5.61□□□□□ -1.51
LMNB1-207ENST00000494185 SPDYE16A6NNV3 312 aaPredicted RBP5.6□□□□□ -1.51
LMNB1-207ENST00000494185 SMYD5Q6GMV2 418 aa5.6□□□□□ -1.51
LMNB1-207ENST00000494185 ARHGEF1Q92888 912 aaKnown RBP5.6□□□□□ -1.51
LMNB1-207ENST00000494185 KCNH8Q96L42 1107 aa5.6□□□□□ -1.51
LMNB1-207ENST00000494185 POTEB2H3BUK9 544 aa5.59□□□□□ -1.51
LMNB1-207ENST00000494185 CAMK2BQ13554 666 aa5.58□□□□□ -1.52
LMNB1-207ENST00000494185 OTUD5Q96G74 571 aa5.58□□□□□ -1.52
LMNB1-207ENST00000494185 PTCD2Q8WV60 388 aaKnown RBP5.57□□□□□ -1.52
LMNB1-207ENST00000494185 ARIH1Q9Y4X5 557 aaPredicted RBP5.57□□□□□ -1.52
LMNB1-207ENST00000494185 TMEM92Q6UXU6 159 aa5.56□□□□□ -1.52
LMNB1-207ENST00000494185 KCNV2Q8TDN2 545 aa5.56□□□□□ -1.52
LMNB1-207ENST00000494185 POTEJP0CG39 1038 aa5.55□□□□□ -1.52
LMNB1-207ENST00000494185 UPF1Q92900 1129 aaKnown RBP eCLIP5.55□□□□□ -1.52
LMNB1-207ENST00000494185 PCDHGA4Q9Y5G9 962 aa5.55□□□□□ -1.52
LMNB1-207ENST00000494185 OXER1Q8TDS5 423 aa5.54□□□□□ -1.52
LMNB1-207ENST00000494185 HOXB1P14653 301 aaPredicted RBP5.53□□□□□ -1.52
LMNB1-207ENST00000494185 PDIA6Q15084 440 aa5.53□□□□□ -1.52
LMNB1-207ENST00000494185 DPYSL4O14531 572 aa5.52□□□□□ -1.53
LMNB1-207ENST00000494185 EVI5O60447 810 aa5.52□□□□□ -1.53
LMNB1-207ENST00000494185 EMP3P54852 163 aa5.52□□□□□ -1.53
LMNB1-207ENST00000494185 PPP4R3BQ5MIZ7 849 aa5.52□□□□□ -1.53
LMNB1-207ENST00000494185 FBXW7Q969H0 707 aa5.52□□□□□ -1.53
LMNB1-207ENST00000494185 EPAS1Q99814 870 aa5.51□□□□□ -1.53
LMNB1-207ENST00000494185 ERBB3P21860 1342 aa5.5□□□□□ -1.53
LMNB1-207ENST00000494185 HOXB3P14651 431 aaPredicted RBP5.5□□□□□ -1.53
LMNB1-207ENST00000494185 FAM163AQ96GL9 167 aaPredicted RBP5.5□□□□□ -1.53
LMNB1-207ENST00000494185 ARSIQ5FYB1 569 aa5.49□□□□□ -1.53
LMNB1-207ENST00000494185 JPH4Q96JJ6 628 aa5.49□□□□□ -1.53
LMNB1-207ENST00000494185 EMILIN3Q9NT22 766 aa5.49□□□□□ -1.53
LMNB1-207ENST00000494185 PHF14O94880 888 aa5.48□□□□□ -1.53
LMNB1-207ENST00000494185 NUDT7P0C024 238 aa5.48□□□□□ -1.53
LMNB1-207ENST00000494185 ST18O60284 1047 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 PBX2P40425 430 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 PTGER2P43116 358 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 TYW1BQ6NUM6 668 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 GPR153Q6NV75 609 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 ZNF454Q8N9F8 522 aa5.47□□□□□ -1.53
LMNB1-207ENST00000494185 CERKQ8TCT0 537 aa5.46□□□□□ -1.54
LMNB1-207ENST00000494185 ZDHHC16Q969W1 377 aa5.46□□□□□ -1.54
LMNB1-207ENST00000494185 SEMA3EO15041 775 aa5.45□□□□□ -1.54
LMNB1-207ENST00000494185 ANO8Q9HCE9 1232 aaPredicted RBP5.45□□□□□ -1.54
LMNB1-207ENST00000494185 GRXCR2A6NFK2 248 aa5.44□□□□□ -1.54
LMNB1-207ENST00000494185 MAP3K7O43318 606 aa5.44□□□□□ -1.54
LMNB1-207ENST00000494185 PTPREP23469 700 aa5.44□□□□□ -1.54
LMNB1-207ENST00000494185 TESPA1A2RU30 521 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-207ENST00000494185 VARS2Q5ST30 1063 aaKnown RBP5.43□□□□□ -1.54
LMNB1-207ENST00000494185 DDX12PQ92771 950 aa5.43□□□□□ -1.54
LMNB1-207ENST00000494185 LHX6Q9UPM6 363 aa5.43□□□□□ -1.54
LMNB1-207ENST00000494185 FAM205CA6NFA0 338 aa5.42□□□□□ -1.54
LMNB1-207ENST00000494185 FOSBP53539 338 aa5.42□□□□□ -1.54
LMNB1-207ENST00000494185 STAC3Q96MF2 364 aa5.42□□□□□ -1.54
LMNB1-207ENST00000494185 EN1Q05925 392 aaPredicted RBP5.41□□□□□ -1.54
LMNB1-207ENST00000494185 MARVELD3Q96A59 401 aa5.41□□□□□ -1.54
LMNB1-207ENST00000494185 BCL2L12Q9HB09 334 aa5.41□□□□□ -1.54
LMNB1-207ENST00000494185 MLLT3P42568 568 aaPredicted RBP5.4□□□□□ -1.54
LMNB1-207ENST00000494185 SLC4A3P48751 1232 aa5.4□□□□□ -1.54
LMNB1-207ENST00000494185 LMOD2Q6P5Q4 547 aa5.4□□□□□ -1.54
LMNB1-207ENST00000494185 GPIHBP1Q8IV16 184 aa5.4□□□□□ -1.54
LMNB1-207ENST00000494185 ZNF687Q8N1G0 1237 aa5.4□□□□□ -1.54
LMNB1-207ENST00000494185 NUTM2FA1L443 756 aa5.39□□□□□ -1.55
LMNB1-207ENST00000494185 PPP1R3GB7ZBB8 358 aa5.39□□□□□ -1.55
LMNB1-207ENST00000494185 ARHGAP33O14559 1287 aa5.39□□□□□ -1.55
LMNB1-207ENST00000494185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.39□□□□□ -1.55
LMNB1-207ENST00000494185 HS3ST6Q96QI5 342 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms