RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
TRAPPC12-222ENST00000493792 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-222ENST00000493792 FANCAO15360 1455 aa16.68■□□□□ 0.26
TRAPPC12-222ENST00000493792 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-222ENST00000493792 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
TRAPPC12-222ENST00000493792 RICTORQ6R327 1708 aa16.65■□□□□ 0.26
TRAPPC12-222ENST00000493792 MAGI2Q86UL8 1455 aa16.65■□□□□ 0.26
TRAPPC12-222ENST00000493792 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
TRAPPC12-222ENST00000493792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAPPC12-222ENST00000493792 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-222ENST00000493792 ZMYM4Q5VZL5 1548 aa16.63■□□□□ 0.25
TRAPPC12-222ENST00000493792 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
TRAPPC12-222ENST00000493792 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
TRAPPC12-222ENST00000493792 ZFYVE16Q7Z3T8 1539 aa16.61■□□□□ 0.25
TRAPPC12-222ENST00000493792 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
TRAPPC12-222ENST00000493792 PLCH2O75038 1416 aa16.6■□□□□ 0.25
TRAPPC12-222ENST00000493792 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
TRAPPC12-222ENST00000493792 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
TRAPPC12-222ENST00000493792 ATP10AO60312 1499 aa16.59■□□□□ 0.25
TRAPPC12-222ENST00000493792 CCDC18Q5T9S5 1454 aa16.58■□□□□ 0.24
TRAPPC12-222ENST00000493792 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
TRAPPC12-222ENST00000493792 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
TRAPPC12-222ENST00000493792 CFAP74Q9C0B2 1584 aa16.55■□□□□ 0.24
TRAPPC12-222ENST00000493792 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
TRAPPC12-222ENST00000493792 AFAP1Q8N556 730 aa16.54■□□□□ 0.24
TRAPPC12-222ENST00000493792 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC12-222ENST00000493792 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
TRAPPC12-222ENST00000493792 KIF14Q15058 1648 aa16.52■□□□□ 0.23
TRAPPC12-222ENST00000493792 STRCQ7RTU9 1775 aa16.5■□□□□ 0.23
TRAPPC12-222ENST00000493792 PTPRTO14522 1441 aa16.5■□□□□ 0.23
TRAPPC12-222ENST00000493792 UHRF1BP1Q6BDS2 1440 aa16.48■□□□□ 0.23
TRAPPC12-222ENST00000493792 FER1L4A9Z1Z3 1794 aa16.48■□□□□ 0.23
TRAPPC12-222ENST00000493792 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
TRAPPC12-222ENST00000493792 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
TRAPPC12-222ENST00000493792 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
TRAPPC12-222ENST00000493792 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-222ENST00000493792 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
TRAPPC12-222ENST00000493792 LTBP4Q8N2S1 1624 aa16.44■□□□□ 0.22
TRAPPC12-222ENST00000493792 TRAPPC8Q9Y2L5 1435 aa16.42■□□□□ 0.22
TRAPPC12-222ENST00000493792 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
TRAPPC12-222ENST00000493792 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
TRAPPC12-222ENST00000493792 APLP2Q06481 763 aa16.39■□□□□ 0.21
TRAPPC12-222ENST00000493792 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
TRAPPC12-222ENST00000493792 KDM5CP41229 1560 aa16.38■□□□□ 0.21
TRAPPC12-222ENST00000493792 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
TRAPPC12-222ENST00000493792 EHBP1L1Q8N3D4 1523 aa16.38■□□□□ 0.21
TRAPPC12-222ENST00000493792 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
TRAPPC12-222ENST00000493792 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
TRAPPC12-222ENST00000493792 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
TRAPPC12-222ENST00000493792 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC12-222ENST00000493792 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
TRAPPC12-222ENST00000493792 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
TRAPPC12-222ENST00000493792 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
TRAPPC12-222ENST00000493792 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
TRAPPC12-222ENST00000493792 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-222ENST00000493792 CDC42BPBQ9Y5S2 1711 aa16.35■□□□□ 0.21
TRAPPC12-222ENST00000493792 AGLP35573 1532 aa16.35■□□□□ 0.21
TRAPPC12-222ENST00000493792 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
TRAPPC12-222ENST00000493792 CDC42BPAQ5VT25 1732 aa16.34■□□□□ 0.21
TRAPPC12-222ENST00000493792 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
TRAPPC12-222ENST00000493792 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-222ENST00000493792 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC12-222ENST00000493792 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-222ENST00000493792 ABCC1P33527 1531 aa16.31■□□□□ 0.2
TRAPPC12-222ENST00000493792 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-222ENST00000493792 ZMYM3Q14202 1370 aa16.31■□□□□ 0.2
TRAPPC12-222ENST00000493792 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
TRAPPC12-222ENST00000493792 C3P01024 1663 aa16.3■□□□□ 0.2
TRAPPC12-222ENST00000493792 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
TRAPPC12-222ENST00000493792 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
TRAPPC12-222ENST00000493792 ABCA6Q8N139 1617 aa16.28■□□□□ 0.2
TRAPPC12-222ENST00000493792 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-222ENST00000493792 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
TRAPPC12-222ENST00000493792 NCOA2Q15596 1464 aa16.28■□□□□ 0.2
TRAPPC12-222ENST00000493792 NPATQ14207 1427 aa16.28■□□□□ 0.2
TRAPPC12-222ENST00000493792 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
TRAPPC12-222ENST00000493792 PKD2Q13563 968 aa16.26■□□□□ 0.19
TRAPPC12-222ENST00000493792 CAMSAP1Q5T5Y3 1602 aa16.25■□□□□ 0.19
TRAPPC12-222ENST00000493792 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
TRAPPC12-222ENST00000493792 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRAPPC12-222ENST00000493792 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
TRAPPC12-222ENST00000493792 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
TRAPPC12-222ENST00000493792 PLEKHH2Q8IVE3 1493 aa16.22■□□□□ 0.19
TRAPPC12-222ENST00000493792 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
TRAPPC12-222ENST00000493792 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-222ENST00000493792 KIDINS220Q9ULH0 1771 aa16.21■□□□□ 0.18
TRAPPC12-222ENST00000493792 HSPA1LP34931 641 aa16.2■□□□□ 0.18
TRAPPC12-222ENST00000493792 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
TRAPPC12-222ENST00000493792 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
TRAPPC12-222ENST00000493792 PLA2R1Q13018 1463 aa16.19■□□□□ 0.18
TRAPPC12-222ENST00000493792 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
TRAPPC12-222ENST00000493792 GGT6Q6P531 493 aa16.17■□□□□ 0.18
TRAPPC12-222ENST00000493792 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
TRAPPC12-222ENST00000493792 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
TRAPPC12-222ENST00000493792 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
TRAPPC12-222ENST00000493792 TOM1O60784 492 aa16.13■□□□□ 0.17
TRAPPC12-222ENST00000493792 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
TRAPPC12-222ENST00000493792 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
TRAPPC12-222ENST00000493792 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
TRAPPC12-222ENST00000493792 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms