RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
NFIA-213ENST00000493627 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
NFIA-213ENST00000493627 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
NFIA-213ENST00000493627 MAGI2Q86UL8 1455 aa14.97□□□□□ -0.01
NFIA-213ENST00000493627 PCF11O94913 1555 aaKnown RBP14.97□□□□□ -0.01
NFIA-213ENST00000493627 CLIP1P30622 1438 aa14.96□□□□□ -0.01
NFIA-213ENST00000493627 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.01
NFIA-213ENST00000493627 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
NFIA-213ENST00000493627 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
NFIA-213ENST00000493627 CASKIN1Q8WXD9 1431 aa14.93□□□□□ -0.02
NFIA-213ENST00000493627 ARHGAP5Q13017 1502 aa14.93□□□□□ -0.02
NFIA-213ENST00000493627 SIGLEC1Q9BZZ2 1709 aa14.93□□□□□ -0.02
NFIA-213ENST00000493627 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
NFIA-213ENST00000493627 RIMS1Q86UR5 1692 aaKnown RBP14.93□□□□□ -0.02
NFIA-213ENST00000493627 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
NFIA-213ENST00000493627 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
NFIA-213ENST00000493627 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
NFIA-213ENST00000493627 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
NFIA-213ENST00000493627 KDM5CP41229 1560 aa14.89□□□□□ -0.03
NFIA-213ENST00000493627 LMTK3Q96Q04 1460 aa14.89□□□□□ -0.03
NFIA-213ENST00000493627 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
NFIA-213ENST00000493627 ATP10AO60312 1499 aa14.87□□□□□ -0.03
NFIA-213ENST00000493627 ABCC1P33527 1531 aa14.86□□□□□ -0.03
NFIA-213ENST00000493627 MLECQ14165 292 aa14.85□□□□□ -0.03
NFIA-213ENST00000493627 CDC42BPBQ9Y5S2 1711 aa14.85□□□□□ -0.03
NFIA-213ENST00000493627 ARHGEF12Q9NZN5 1544 aa14.85□□□□□ -0.03
NFIA-213ENST00000493627 FER1L4A9Z1Z3 1794 aa14.85□□□□□ -0.03
NFIA-213ENST00000493627 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
NFIA-213ENST00000493627 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
NFIA-213ENST00000493627 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
NFIA-213ENST00000493627 MLH3Q9UHC1 1453 aa14.81□□□□□ -0.04
NFIA-213ENST00000493627 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
NFIA-213ENST00000493627 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
NFIA-213ENST00000493627 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
NFIA-213ENST00000493627 TRAPPC8Q9Y2L5 1435 aa14.8□□□□□ -0.04
NFIA-213ENST00000493627 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
NFIA-213ENST00000493627 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.05
NFIA-213ENST00000493627 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
NFIA-213ENST00000493627 HSPA2P54652 639 aa14.76□□□□□ -0.05
NFIA-213ENST00000493627 AGLP35573 1532 aa14.75□□□□□ -0.05
NFIA-213ENST00000493627 SYCP2Q9BX26 1530 aa14.75□□□□□ -0.05
NFIA-213ENST00000493627 KIDINS220Q9ULH0 1771 aa14.74□□□□□ -0.05
NFIA-213ENST00000493627 PREX1Q8TCU6 1659 aa14.72□□□□□ -0.05
NFIA-213ENST00000493627 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
NFIA-213ENST00000493627 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
NFIA-213ENST00000493627 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
NFIA-213ENST00000493627 CEBPAP49715 358 aaPredicted RBP14.71□□□□□ -0.05
NFIA-213ENST00000493627 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.06
NFIA-213ENST00000493627 EHBP1L1Q8N3D4 1523 aa14.71□□□□□ -0.06
NFIA-213ENST00000493627 PLEKHH2Q8IVE3 1493 aa14.7□□□□□ -0.06
NFIA-213ENST00000493627 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
NFIA-213ENST00000493627 FBXO41Q8TF61 875 aa14.69□□□□□ -0.06
NFIA-213ENST00000493627 INO80Q9ULG1 1556 aaPredicted RBP14.68□□□□□ -0.06
NFIA-213ENST00000493627 UHRF1BP1Q6BDS2 1440 aa14.68□□□□□ -0.06
NFIA-213ENST00000493627 ATP7AQ04656 1500 aa14.68□□□□□ -0.06
NFIA-213ENST00000493627 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
NFIA-213ENST00000493627 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
NFIA-213ENST00000493627 C3P01024 1663 aa14.68□□□□□ -0.06
NFIA-213ENST00000493627 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
NFIA-213ENST00000493627 HNRNPMP52272 730 aaKnown RBP eCLIP14.66□□□□□ -0.06
NFIA-213ENST00000493627 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
NFIA-213ENST00000493627 CNTLNQ9NXG0 1405 aa14.66□□□□□ -0.06
NFIA-213ENST00000493627 PLXNC1O60486 1568 aa14.65□□□□□ -0.06
NFIA-213ENST00000493627 A2MP01023 1474 aa14.63□□□□□ -0.07
NFIA-213ENST00000493627 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
NFIA-213ENST00000493627 MBD5Q9P267 1494 aa14.61□□□□□ -0.07
NFIA-213ENST00000493627 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
NFIA-213ENST00000493627 ZNF644Q9H582 1327 aaPredicted RBP14.6□□□□□ -0.07
NFIA-213ENST00000493627 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
NFIA-213ENST00000493627 STRCQ7RTU9 1775 aa14.59□□□□□ -0.07
NFIA-213ENST00000493627 NPATQ14207 1427 aa14.58□□□□□ -0.07
NFIA-213ENST00000493627 SETD1BQ9UPS6 1966 aaKnown RBP14.58□□□□□ -0.07
NFIA-213ENST00000493627 ADGBQ8N7X0 1667 aa14.58□□□□□ -0.08
NFIA-213ENST00000493627 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
NFIA-213ENST00000493627 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
NFIA-213ENST00000493627 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
NFIA-213ENST00000493627 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
NFIA-213ENST00000493627 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
NFIA-213ENST00000493627 ZMYM3Q14202 1370 aa14.56□□□□□ -0.08
NFIA-213ENST00000493627 RTEL1-TNFRSF6BF6WH68 1400 aa14.56□□□□□ -0.08
NFIA-213ENST00000493627 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
NFIA-213ENST00000493627 NCOA1Q15788 1441 aa14.54□□□□□ -0.08
NFIA-213ENST00000493627 PTPRTO14522 1441 aa14.53□□□□□ -0.08
NFIA-213ENST00000493627 GGT6Q6P531 493 aa14.53□□□□□ -0.08
NFIA-213ENST00000493627 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.08
NFIA-213ENST00000493627 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
NFIA-213ENST00000493627 PTPRKQ15262 1439 aa14.52□□□□□ -0.08
NFIA-213ENST00000493627 LOC105371045A0A1W2PR82 267 aa14.51□□□□□ -0.09
NFIA-213ENST00000493627 ZNF142P52746 1687 aaPredicted RBP14.51□□□□□ -0.09
NFIA-213ENST00000493627 CAMSAP1Q5T5Y3 1602 aa14.51□□□□□ -0.09
NFIA-213ENST00000493627 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
NFIA-213ENST00000493627 DHX29Q7Z478 1369 aaKnown RBP14.5□□□□□ -0.09
NFIA-213ENST00000493627 CEP170BQ9Y4F5 1589 aaPredicted RBP14.5□□□□□ -0.09
NFIA-213ENST00000493627 PPP6R1Q9UPN7 881 aa14.49□□□□□ -0.09
NFIA-213ENST00000493627 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
NFIA-213ENST00000493627 FAM135AQ9P2D6 1515 aa14.48□□□□□ -0.09
NFIA-213ENST00000493627 KDM5DQ9BY66 1539 aa14.47□□□□□ -0.09
NFIA-213ENST00000493627 RSPH4AQ5TD94 716 aa14.47□□□□□ -0.09
NFIA-213ENST00000493627 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
NFIA-213ENST00000493627 LTBP4Q8N2S1 1624 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms