RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 POGZQ7Z3K3 1410 aa22.99■■□□□ 1.27
ATG3-206ENST00000492886 MAGI2Q86UL8 1455 aa22.99■■□□□ 1.27
ATG3-206ENST00000492886 CLIP1P30622 1438 aa22.99■■□□□ 1.27
ATG3-206ENST00000492886 HECW2Q9P2P5 1572 aa22.98■■□□□ 1.27
ATG3-206ENST00000492886 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
ATG3-206ENST00000492886 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
ATG3-206ENST00000492886 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
ATG3-206ENST00000492886 MADDQ8WXG6 1647 aa22.95■■□□□ 1.26
ATG3-206ENST00000492886 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
ATG3-206ENST00000492886 YEATS2Q9ULM3 1422 aa22.94■■□□□ 1.26
ATG3-206ENST00000492886 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
ATG3-206ENST00000492886 KDM5CP41229 1560 aa22.93■■□□□ 1.26
ATG3-206ENST00000492886 PTPRMP28827 1452 aa22.92■■□□□ 1.26
ATG3-206ENST00000492886 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
ATG3-206ENST00000492886 ZNF518AQ6AHZ1 1483 aa22.87■■□□□ 1.25
ATG3-206ENST00000492886 ABCC1P33527 1531 aa22.87■■□□□ 1.25
ATG3-206ENST00000492886 RIMS1Q86UR5 1692 aaKnown RBP22.87■■□□□ 1.25
ATG3-206ENST00000492886 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
ATG3-206ENST00000492886 ARHGEF12Q9NZN5 1544 aa22.83■■□□□ 1.25
ATG3-206ENST00000492886 ATP10AO60312 1499 aa22.83■■□□□ 1.25
ATG3-206ENST00000492886 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
ATG3-206ENST00000492886 REREQ9P2R6 1566 aa22.81■■□□□ 1.24
ATG3-206ENST00000492886 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
ATG3-206ENST00000492886 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
ATG3-206ENST00000492886 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
ATG3-206ENST00000492886 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
ATG3-206ENST00000492886 MLH3Q9UHC1 1453 aa22.79■■□□□ 1.24
ATG3-206ENST00000492886 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
ATG3-206ENST00000492886 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
ATG3-206ENST00000492886 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
ATG3-206ENST00000492886 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
ATG3-206ENST00000492886 TRAPPC8Q9Y2L5 1435 aa22.76■■□□□ 1.23
ATG3-206ENST00000492886 AFAP1Q8N556 730 aa22.76■■□□□ 1.23
ATG3-206ENST00000492886 LMTK3Q96Q04 1460 aa22.72■■□□□ 1.23
ATG3-206ENST00000492886 EHBP1L1Q8N3D4 1523 aa22.71■■□□□ 1.23
ATG3-206ENST00000492886 AGLP35573 1532 aa22.7■■□□□ 1.22
ATG3-206ENST00000492886 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
ATG3-206ENST00000492886 SYCP2Q9BX26 1530 aa22.69■■□□□ 1.22
ATG3-206ENST00000492886 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
ATG3-206ENST00000492886 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
ATG3-206ENST00000492886 INO80Q9ULG1 1556 aaPredicted RBP22.64■■□□□ 1.22
ATG3-206ENST00000492886 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
ATG3-206ENST00000492886 MLECQ14165 292 aa22.62■■□□□ 1.21
ATG3-206ENST00000492886 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
ATG3-206ENST00000492886 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
ATG3-206ENST00000492886 PREX1Q8TCU6 1659 aa22.6■■□□□ 1.21
ATG3-206ENST00000492886 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
ATG3-206ENST00000492886 CFDP1Q9UEE9 299 aaPredicted RBP22.58■■□□□ 1.21
ATG3-206ENST00000492886 PLXNC1O60486 1568 aa22.58■■□□□ 1.2
ATG3-206ENST00000492886 C3P01024 1663 aa22.58■■□□□ 1.2
ATG3-206ENST00000492886 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
ATG3-206ENST00000492886 SETD1BQ9UPS6 1966 aaKnown RBP22.56■■□□□ 1.2
ATG3-206ENST00000492886 MBD5Q9P267 1494 aa22.56■■□□□ 1.2
ATG3-206ENST00000492886 LOC105371045A0A1W2PR82 267 aa22.56■■□□□ 1.2
ATG3-206ENST00000492886 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
ATG3-206ENST00000492886 HNRNPMP52272 730 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATG3-206ENST00000492886 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
ATG3-206ENST00000492886 MROH2AA6NES4 1674 aa22.53■■□□□ 1.2
ATG3-206ENST00000492886 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
ATG3-206ENST00000492886 MYT1LQ9UL68 1186 aa22.53■■□□□ 1.2
ATG3-206ENST00000492886 SPAG9O60271 1321 aaKnown RBP22.52■■□□□ 1.2
ATG3-206ENST00000492886 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
ATG3-206ENST00000492886 ZNF644Q9H582 1327 aaPredicted RBP22.49■■□□□ 1.19
ATG3-206ENST00000492886 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
ATG3-206ENST00000492886 A2MP01023 1474 aa22.47■■□□□ 1.19
ATG3-206ENST00000492886 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
ATG3-206ENST00000492886 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
ATG3-206ENST00000492886 CNTLNQ9NXG0 1405 aa22.47■■□□□ 1.19
ATG3-206ENST00000492886 ILDR1Q86SU0 546 aaPredicted RBP22.46■■□□□ 1.19
ATG3-206ENST00000492886 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
ATG3-206ENST00000492886 CAMSAP2Q08AD1 1489 aa22.45■■□□□ 1.18
ATG3-206ENST00000492886 HSPA2P54652 639 aa22.44■■□□□ 1.18
ATG3-206ENST00000492886 ARHGEF5Q12774 1597 aa22.44■■□□□ 1.18
ATG3-206ENST00000492886 STRCQ7RTU9 1775 aa22.43■■□□□ 1.18
ATG3-206ENST00000492886 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
ATG3-206ENST00000492886 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
ATG3-206ENST00000492886 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
ATG3-206ENST00000492886 NPATQ14207 1427 aa22.37■■□□□ 1.17
ATG3-206ENST00000492886 MAST1Q9Y2H9 1570 aa22.35■■□□□ 1.17
ATG3-206ENST00000492886 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
ATG3-206ENST00000492886 RSPH4AQ5TD94 716 aa22.35■■□□□ 1.17
ATG3-206ENST00000492886 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
ATG3-206ENST00000492886 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
ATG3-206ENST00000492886 ESF1Q9H501 851 aaKnown RBP22.33■■□□□ 1.17
ATG3-206ENST00000492886 ZNF142P52746 1687 aaPredicted RBP22.33■■□□□ 1.16
ATG3-206ENST00000492886 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
ATG3-206ENST00000492886 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
ATG3-206ENST00000492886 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
ATG3-206ENST00000492886 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
ATG3-206ENST00000492886 MYO3AQ8NEV4 1616 aa22.29■■□□□ 1.16
ATG3-206ENST00000492886 PTPRKQ15262 1439 aa22.28■■□□□ 1.16
ATG3-206ENST00000492886 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
ATG3-206ENST00000492886 CROCC2H7BZ55 1655 aa22.25■■□□□ 1.15
ATG3-206ENST00000492886 RNF17Q9BXT8 1623 aaKnown RBP22.24■■□□□ 1.15
ATG3-206ENST00000492886 GGT6Q6P531 493 aa22.24■■□□□ 1.15
ATG3-206ENST00000492886 EIF2AK4Q9P2K8 1649 aaKnown RBP22.24■■□□□ 1.15
ATG3-206ENST00000492886 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
ATG3-206ENST00000492886 KDM5DQ9BY66 1539 aa22.23■■□□□ 1.15
ATG3-206ENST00000492886 PTPRTO14522 1441 aa22.23■■□□□ 1.15
ATG3-206ENST00000492886 CEP170BQ9Y4F5 1589 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms