RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
ATG3-206ENST00000492886 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
ATG3-206ENST00000492886 ABCC9O60706 1549 aa31.23■■■□□ 2.59
ATG3-206ENST00000492886 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
ATG3-206ENST00000492886 NACADO15069 1562 aa29.81■■■□□ 2.36
ATG3-206ENST00000492886 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
ATG3-206ENST00000492886 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
ATG3-206ENST00000492886 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
ATG3-206ENST00000492886 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
ATG3-206ENST00000492886 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
ATG3-206ENST00000492886 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
ATG3-206ENST00000492886 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
ATG3-206ENST00000492886 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
ATG3-206ENST00000492886 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
ATG3-206ENST00000492886 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
ATG3-206ENST00000492886 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.12
ATG3-206ENST00000492886 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
ATG3-206ENST00000492886 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
ATG3-206ENST00000492886 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
ATG3-206ENST00000492886 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
ATG3-206ENST00000492886 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
ATG3-206ENST00000492886 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
ATG3-206ENST00000492886 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
ATG3-206ENST00000492886 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
ATG3-206ENST00000492886 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
ATG3-206ENST00000492886 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
ATG3-206ENST00000492886 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
ATG3-206ENST00000492886 NESP48681 1621 aa26.94■■□□□ 1.9
ATG3-206ENST00000492886 CUX2O14529 1486 aa26.9■■□□□ 1.9
ATG3-206ENST00000492886 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
ATG3-206ENST00000492886 WIZO95785 1651 aa26.88■■□□□ 1.89
ATG3-206ENST00000492886 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
ATG3-206ENST00000492886 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
ATG3-206ENST00000492886 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
ATG3-206ENST00000492886 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
ATG3-206ENST00000492886 CADPSQ9ULU8 1353 aa26.6■■□□□ 1.85
ATG3-206ENST00000492886 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
ATG3-206ENST00000492886 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
ATG3-206ENST00000492886 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
ATG3-206ENST00000492886 CFTRP13569 1480 aa26.41■■□□□ 1.82
ATG3-206ENST00000492886 MRC2Q9UBG0 1479 aa26.39■■□□□ 1.82
ATG3-206ENST00000492886 WDR62O43379 1518 aa26.39■■□□□ 1.81
ATG3-206ENST00000492886 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
ATG3-206ENST00000492886 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
ATG3-206ENST00000492886 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
ATG3-206ENST00000492886 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
ATG3-206ENST00000492886 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
ATG3-206ENST00000492886 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
ATG3-206ENST00000492886 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
ATG3-206ENST00000492886 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
ATG3-206ENST00000492886 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
ATG3-206ENST00000492886 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
ATG3-206ENST00000492886 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
ATG3-206ENST00000492886 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
ATG3-206ENST00000492886 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
ATG3-206ENST00000492886 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
ATG3-206ENST00000492886 CUX1P39880 1505 aa25.53■■□□□ 1.68
ATG3-206ENST00000492886 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
ATG3-206ENST00000492886 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
ATG3-206ENST00000492886 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
ATG3-206ENST00000492886 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
ATG3-206ENST00000492886 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
ATG3-206ENST00000492886 CHD1O14646 1710 aa25.45■■□□□ 1.66
ATG3-206ENST00000492886 SOGA1O94964 1423 aa25.44■■□□□ 1.66
ATG3-206ENST00000492886 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
ATG3-206ENST00000492886 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
ATG3-206ENST00000492886 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
ATG3-206ENST00000492886 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
ATG3-206ENST00000492886 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
ATG3-206ENST00000492886 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
ATG3-206ENST00000492886 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
ATG3-206ENST00000492886 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
ATG3-206ENST00000492886 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
ATG3-206ENST00000492886 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
ATG3-206ENST00000492886 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
ATG3-206ENST00000492886 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
ATG3-206ENST00000492886 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
ATG3-206ENST00000492886 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
ATG3-206ENST00000492886 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
ATG3-206ENST00000492886 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
ATG3-206ENST00000492886 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
ATG3-206ENST00000492886 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
ATG3-206ENST00000492886 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
ATG3-206ENST00000492886 FBLN2P98095 1184 aa25.11■■□□□ 1.61
ATG3-206ENST00000492886 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
ATG3-206ENST00000492886 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
ATG3-206ENST00000492886 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
ATG3-206ENST00000492886 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
ATG3-206ENST00000492886 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
ATG3-206ENST00000492886 CYB5RLQ6IPT4 315 aa24.92■■□□□ 1.58
ATG3-206ENST00000492886 NUP160Q12769 1436 aa24.86■■□□□ 1.57
ATG3-206ENST00000492886 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
ATG3-206ENST00000492886 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
ATG3-206ENST00000492886 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
ATG3-206ENST00000492886 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
ATG3-206ENST00000492886 RUSC2Q8N2Y8 1516 aa24.65■■□□□ 1.54
ATG3-206ENST00000492886 CUL7Q14999 1698 aa24.63■■□□□ 1.53
ATG3-206ENST00000492886 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
ATG3-206ENST00000492886 IGF1RP08069 1367 aa24.6■■□□□ 1.53
ATG3-206ENST00000492886 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms