RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.14
PBX3-209ENST00000491787 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
PBX3-209ENST00000491787 YEATS2Q9ULM3 1422 aa28.38■■■□□ 2.13
PBX3-209ENST00000491787 KIF14Q15058 1648 aa28.38■■■□□ 2.13
PBX3-209ENST00000491787 ILDR1Q86SU0 546 aaPredicted RBP28.37■■■□□ 2.13
PBX3-209ENST00000491787 SIGLEC1Q9BZZ2 1709 aa28.36■■■□□ 2.13
PBX3-209ENST00000491787 CASKIN1Q8WXD9 1431 aa28.33■■■□□ 2.13
PBX3-209ENST00000491787 CLIP1P30622 1438 aa28.32■■■□□ 2.12
PBX3-209ENST00000491787 RIMS1Q86UR5 1692 aaKnown RBP28.3■■■□□ 2.12
PBX3-209ENST00000491787 ATP10AO60312 1499 aa28.27■■■□□ 2.12
PBX3-209ENST00000491787 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
PBX3-209ENST00000491787 CDC42BPBQ9Y5S2 1711 aa28.26■■■□□ 2.11
PBX3-209ENST00000491787 PCF11O94913 1555 aaKnown RBP28.25■■■□□ 2.11
PBX3-209ENST00000491787 ARHGAP5Q13017 1502 aa28.24■■■□□ 2.11
PBX3-209ENST00000491787 ZNF518AQ6AHZ1 1483 aa28.23■■■□□ 2.11
PBX3-209ENST00000491787 LMTK3Q96Q04 1460 aa28.23■■■□□ 2.11
PBX3-209ENST00000491787 KDM5CP41229 1560 aa28.23■■■□□ 2.11
PBX3-209ENST00000491787 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
PBX3-209ENST00000491787 AFAP1Q8N556 730 aa28.21■■■□□ 2.11
PBX3-209ENST00000491787 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
PBX3-209ENST00000491787 ARHGEF12Q9NZN5 1544 aa28.18■■■□□ 2.1
PBX3-209ENST00000491787 PREX2Q70Z35 1606 aa28.18■■■□□ 2.1
PBX3-209ENST00000491787 FER1L4A9Z1Z3 1794 aa28.17■■■□□ 2.1
PBX3-209ENST00000491787 MLECQ14165 292 aa28.15■■■□□ 2.1
PBX3-209ENST00000491787 MLH3Q9UHC1 1453 aa28.14■■■□□ 2.09
PBX3-209ENST00000491787 CDC42BPAQ5VT25 1732 aa28.12■■■□□ 2.09
PBX3-209ENST00000491787 REREQ9P2R6 1566 aa28.11■■■□□ 2.09
PBX3-209ENST00000491787 ABCC1P33527 1531 aa28.11■■■□□ 2.09
PBX3-209ENST00000491787 DIP2CQ9Y2E4 1556 aa28.1■■■□□ 2.09
PBX3-209ENST00000491787 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
PBX3-209ENST00000491787 ITSN2Q9NZM3 1697 aa28.08■■■□□ 2.09
PBX3-209ENST00000491787 ABCA6Q8N139 1617 aa28.04■■■□□ 2.08
PBX3-209ENST00000491787 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
PBX3-209ENST00000491787 AGLP35573 1532 aa28.02■■■□□ 2.08
PBX3-209ENST00000491787 GPATCH8Q9UKJ3 1502 aaKnown RBP28.02■■■□□ 2.08
PBX3-209ENST00000491787 HSPA2P54652 639 aa28.02■■■□□ 2.08
PBX3-209ENST00000491787 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
PBX3-209ENST00000491787 KIDINS220Q9ULH0 1771 aa28.01■■■□□ 2.08
PBX3-209ENST00000491787 FBXO41Q8TF61 875 aa27.99■■■□□ 2.07
PBX3-209ENST00000491787 MYT1LQ9UL68 1186 aa27.99■■■□□ 2.07
PBX3-209ENST00000491787 CEBPAP49715 358 aaPredicted RBP27.97■■■□□ 2.07
PBX3-209ENST00000491787 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
PBX3-209ENST00000491787 PREX1Q8TCU6 1659 aa27.95■■■□□ 2.07
PBX3-209ENST00000491787 KIAA1107Q9UPP5 1409 aa27.93■■■□□ 2.06
PBX3-209ENST00000491787 ZNF777Q9ULD5 760 aaPredicted RBP27.91■■■□□ 2.06
PBX3-209ENST00000491787 SYCP2Q9BX26 1530 aa27.89■■■□□ 2.06
PBX3-209ENST00000491787 HNRNPMP52272 730 aaKnown RBP eCLIP27.89■■■□□ 2.06
PBX3-209ENST00000491787 PLEKHH2Q8IVE3 1493 aa27.89■■■□□ 2.05
PBX3-209ENST00000491787 CFDP1Q9UEE9 299 aaPredicted RBP27.88■■■□□ 2.05
PBX3-209ENST00000491787 C3P01024 1663 aa27.87■■■□□ 2.05
PBX3-209ENST00000491787 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
PBX3-209ENST00000491787 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
PBX3-209ENST00000491787 SPAG9O60271 1321 aaKnown RBP27.86■■■□□ 2.05
PBX3-209ENST00000491787 CEP162Q5TB80 1403 aa27.83■■■□□ 2.05
PBX3-209ENST00000491787 CNTLNQ9NXG0 1405 aa27.83■■■□□ 2.05
PBX3-209ENST00000491787 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
PBX3-209ENST00000491787 UHRF1BP1Q6BDS2 1440 aa27.81■■■□□ 2.04
PBX3-209ENST00000491787 ATP7AQ04656 1500 aa27.8■■■□□ 2.04
PBX3-209ENST00000491787 INO80Q9ULG1 1556 aaPredicted RBP27.8■■■□□ 2.04
PBX3-209ENST00000491787 TIAM1Q13009 1591 aa27.79■■■□□ 2.04
PBX3-209ENST00000491787 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
PBX3-209ENST00000491787 ESF1Q9H501 851 aaKnown RBP27.79■■■□□ 2.04
PBX3-209ENST00000491787 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
PBX3-209ENST00000491787 MBD5Q9P267 1494 aa27.76■■■□□ 2.03
PBX3-209ENST00000491787 SUPT6HQ7KZ85 1726 aaKnown RBP27.75■■■□□ 2.03
PBX3-209ENST00000491787 MROH2AA6NES4 1674 aa27.75■■■□□ 2.03
PBX3-209ENST00000491787 DMRT2Q9Y5R5 561 aa27.74■■■□□ 2.03
PBX3-209ENST00000491787 A2MP01023 1474 aa27.74■■■□□ 2.03
PBX3-209ENST00000491787 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
PBX3-209ENST00000491787 CERKQ8TCT0 537 aa27.72■■■□□ 2.03
PBX3-209ENST00000491787 ZMYM3Q14202 1370 aa27.71■■■□□ 2.03
PBX3-209ENST00000491787 NPATQ14207 1427 aa27.7■■■□□ 2.03
PBX3-209ENST00000491787 ADGBQ8N7X0 1667 aa27.68■■■□□ 2.02
PBX3-209ENST00000491787 RTEL1-TNFRSF6BF6WH68 1400 aa27.68■■■□□ 2.02
PBX3-209ENST00000491787 PPP6R1Q9UPN7 881 aa27.66■■■□□ 2.02
PBX3-209ENST00000491787 PTPRTO14522 1441 aa27.66■■■□□ 2.02
PBX3-209ENST00000491787 NCOA2Q15596 1464 aa27.64■■■□□ 2.02
PBX3-209ENST00000491787 CLTCQ00610 1675 aaKnown RBP27.62■■■□□ 2.01
PBX3-209ENST00000491787 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
PBX3-209ENST00000491787 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
PBX3-209ENST00000491787 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
PBX3-209ENST00000491787 LOC105371045A0A1W2PR82 267 aa27.59■■■□□ 2.01
PBX3-209ENST00000491787 GGT6Q6P531 493 aa27.59■■■□□ 2.01
PBX3-209ENST00000491787 PTPRKQ15262 1439 aa27.58■■■□□ 2
PBX3-209ENST00000491787 VPS8Q8N3P4 1428 aa27.57■■■□□ 2
PBX3-209ENST00000491787 CAMSAP2Q08AD1 1489 aa27.56■■■□□ 2
PBX3-209ENST00000491787 CCDC141Q6ZP82 1450 aa27.56■■■□□ 2
PBX3-209ENST00000491787 LRRC9Q6ZRR7 1453 aa27.52■■■□□ 2
PBX3-209ENST00000491787 CAMSAP1Q5T5Y3 1602 aa27.52■■■□□ 2
PBX3-209ENST00000491787 ARHGEF5Q12774 1597 aa27.52■■■□□ 2
PBX3-209ENST00000491787 ZNF142P52746 1687 aaPredicted RBP27.51■■□□□ 1.99
PBX3-209ENST00000491787 MAP3K1Q13233 1512 aa27.51■■□□□ 1.99
PBX3-209ENST00000491787 MYO3AQ8NEV4 1616 aa27.49■■□□□ 1.99
PBX3-209ENST00000491787 LTBP4Q8N2S1 1624 aa27.48■■□□□ 1.99
PBX3-209ENST00000491787 PLA2R1Q13018 1463 aa27.46■■□□□ 1.99
PBX3-209ENST00000491787 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
PBX3-209ENST00000491787 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.99
PBX3-209ENST00000491787 KIF3BO15066 747 aa27.45■■□□□ 1.98
PBX3-209ENST00000491787 TSPY4P0CV99 314 aa27.43■■□□□ 1.98
PBX3-209ENST00000491787 TSPY10P0CW01 314 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms