RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZFYVE16Q7Z3T8 1539 aa26.4■■□□□ 1.82
PDLIM2-217ENST00000491330 ZNF518AQ6AHZ1 1483 aa26.38■■□□□ 1.81
PDLIM2-217ENST00000491330 MTUS2Q5JR59 1369 aa26.38■■□□□ 1.81
PDLIM2-217ENST00000491330 ZMYM4Q5VZL5 1548 aa26.38■■□□□ 1.81
PDLIM2-217ENST00000491330 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
PDLIM2-217ENST00000491330 RICTORQ6R327 1708 aa26.36■■□□□ 1.81
PDLIM2-217ENST00000491330 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
PDLIM2-217ENST00000491330 ZNF777Q9ULD5 760 aaPredicted RBP26.35■■□□□ 1.81
PDLIM2-217ENST00000491330 AFAP1Q8N556 730 aa26.34■■□□□ 1.81
PDLIM2-217ENST00000491330 ATP10AO60312 1499 aa26.32■■□□□ 1.8
PDLIM2-217ENST00000491330 MLECQ14165 292 aa26.32■■□□□ 1.8
PDLIM2-217ENST00000491330 PTPRMP28827 1452 aa26.31■■□□□ 1.8
PDLIM2-217ENST00000491330 CFDP1Q9UEE9 299 aaPredicted RBP26.31■■□□□ 1.8
PDLIM2-217ENST00000491330 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
PDLIM2-217ENST00000491330 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
PDLIM2-217ENST00000491330 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
PDLIM2-217ENST00000491330 ESF1Q9H501 851 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-217ENST00000491330 LRRIQ1Q96JM4 1722 aa26.26■■□□□ 1.79
PDLIM2-217ENST00000491330 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
PDLIM2-217ENST00000491330 ADAMTSL3P82987 1691 aa26.25■■□□□ 1.79
PDLIM2-217ENST00000491330 PLPPR3Q6T4P5 718 aa26.23■■□□□ 1.79
PDLIM2-217ENST00000491330 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
PDLIM2-217ENST00000491330 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
PDLIM2-217ENST00000491330 HECW2Q9P2P5 1572 aa26.21■■□□□ 1.79
PDLIM2-217ENST00000491330 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
PDLIM2-217ENST00000491330 MLH3Q9UHC1 1453 aa26.19■■□□□ 1.78
PDLIM2-217ENST00000491330 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
PDLIM2-217ENST00000491330 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
PDLIM2-217ENST00000491330 MADDQ8WXG6 1647 aa26.17■■□□□ 1.78
PDLIM2-217ENST00000491330 CDC42BPBQ9Y5S2 1711 aa26.17■■□□□ 1.78
PDLIM2-217ENST00000491330 KDM5CP41229 1560 aa26.16■■□□□ 1.78
PDLIM2-217ENST00000491330 ABCC1P33527 1531 aa26.16■■□□□ 1.78
PDLIM2-217ENST00000491330 HNRNPMP52272 730 aaKnown RBP eCLIP26.16■■□□□ 1.78
PDLIM2-217ENST00000491330 TRAPPC8Q9Y2L5 1435 aa26.15■■□□□ 1.78
PDLIM2-217ENST00000491330 APLP2Q06481 763 aa26.14■■□□□ 1.78
PDLIM2-217ENST00000491330 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.77
PDLIM2-217ENST00000491330 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
PDLIM2-217ENST00000491330 RIMS1Q86UR5 1692 aaKnown RBP26.09■■□□□ 1.77
PDLIM2-217ENST00000491330 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
PDLIM2-217ENST00000491330 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
PDLIM2-217ENST00000491330 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.77
PDLIM2-217ENST00000491330 RSPH4AQ5TD94 716 aa26.08■■□□□ 1.77
PDLIM2-217ENST00000491330 ITSN2Q9NZM3 1697 aa26.05■■□□□ 1.76
PDLIM2-217ENST00000491330 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
PDLIM2-217ENST00000491330 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
PDLIM2-217ENST00000491330 DIP2CQ9Y2E4 1556 aa26.04■■□□□ 1.76
PDLIM2-217ENST00000491330 SAMD9LQ8IVG5 1584 aa26.02■■□□□ 1.76
PDLIM2-217ENST00000491330 AGLP35573 1532 aa26.01■■□□□ 1.75
PDLIM2-217ENST00000491330 FER1L4A9Z1Z3 1794 aa26■■□□□ 1.75
PDLIM2-217ENST00000491330 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
PDLIM2-217ENST00000491330 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
PDLIM2-217ENST00000491330 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
PDLIM2-217ENST00000491330 CEBPAP49715 358 aaPredicted RBP25.97■■□□□ 1.75
PDLIM2-217ENST00000491330 NCOA2Q15596 1464 aa25.97■■□□□ 1.75
PDLIM2-217ENST00000491330 ABCA6Q8N139 1617 aa25.96■■□□□ 1.75
PDLIM2-217ENST00000491330 ZNF644Q9H582 1327 aaPredicted RBP25.96■■□□□ 1.75
PDLIM2-217ENST00000491330 SUPT6HQ7KZ85 1726 aaKnown RBP25.96■■□□□ 1.75
PDLIM2-217ENST00000491330 TIAM1Q13009 1591 aa25.95■■□□□ 1.75
PDLIM2-217ENST00000491330 LMTK3Q96Q04 1460 aa25.95■■□□□ 1.74
PDLIM2-217ENST00000491330 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
PDLIM2-217ENST00000491330 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
PDLIM2-217ENST00000491330 A2MP01023 1474 aa25.92■■□□□ 1.74
PDLIM2-217ENST00000491330 SIGLEC1Q9BZZ2 1709 aa25.92■■□□□ 1.74
PDLIM2-217ENST00000491330 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
PDLIM2-217ENST00000491330 HSPA2P54652 639 aa25.92■■□□□ 1.74
PDLIM2-217ENST00000491330 KIDINS220Q9ULH0 1771 aa25.92■■□□□ 1.74
PDLIM2-217ENST00000491330 LRRC9Q6ZRR7 1453 aa25.91■■□□□ 1.74
PDLIM2-217ENST00000491330 GGT6Q6P531 493 aa25.91■■□□□ 1.74
PDLIM2-217ENST00000491330 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
PDLIM2-217ENST00000491330 DMRT2Q9Y5R5 561 aa25.9■■□□□ 1.74
PDLIM2-217ENST00000491330 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
PDLIM2-217ENST00000491330 CCDC141Q6ZP82 1450 aa25.86■■□□□ 1.73
PDLIM2-217ENST00000491330 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
PDLIM2-217ENST00000491330 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
PDLIM2-217ENST00000491330 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-217ENST00000491330 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
PDLIM2-217ENST00000491330 INO80Q9ULG1 1556 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-217ENST00000491330 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
PDLIM2-217ENST00000491330 ZMYM3Q14202 1370 aa25.82■■□□□ 1.72
PDLIM2-217ENST00000491330 MIA2Q96PC5 1412 aa25.8■■□□□ 1.72
PDLIM2-217ENST00000491330 KIF3BO15066 747 aa25.79■■□□□ 1.72
PDLIM2-217ENST00000491330 PREX1Q8TCU6 1659 aa25.77■■□□□ 1.72
PDLIM2-217ENST00000491330 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
PDLIM2-217ENST00000491330 NPATQ14207 1427 aa25.76■■□□□ 1.71
PDLIM2-217ENST00000491330 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
PDLIM2-217ENST00000491330 SETD1BQ9UPS6 1966 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-217ENST00000491330 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
PDLIM2-217ENST00000491330 WASHC2CQ9Y4E1 1318 aa25.72■■□□□ 1.71
PDLIM2-217ENST00000491330 FBXO41Q8TF61 875 aa25.72■■□□□ 1.71
PDLIM2-217ENST00000491330 ARHGEF5Q12774 1597 aa25.71■■□□□ 1.71
PDLIM2-217ENST00000491330 C3P01024 1663 aa25.69■■□□□ 1.7
PDLIM2-217ENST00000491330 MROH2AA6NES4 1674 aa25.68■■□□□ 1.7
PDLIM2-217ENST00000491330 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
PDLIM2-217ENST00000491330 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
PDLIM2-217ENST00000491330 CLTCQ00610 1675 aaKnown RBP25.6■■□□□ 1.69
PDLIM2-217ENST00000491330 PTPRKQ15262 1439 aa25.59■■□□□ 1.69
PDLIM2-217ENST00000491330 PTPRTO14522 1441 aa25.57■■□□□ 1.68
PDLIM2-217ENST00000491330 PKD2Q13563 968 aa25.57■■□□□ 1.68
PDLIM2-217ENST00000491330 KDM5DQ9BY66 1539 aa25.56■■□□□ 1.68
PDLIM2-217ENST00000491330 MAST1Q9Y2H9 1570 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms