RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
ARPC1B-220ENST00000491294 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
ARPC1B-220ENST00000491294 ARHGAP5Q13017 1502 aa28.57■■■□□ 2.16
ARPC1B-220ENST00000491294 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
ARPC1B-220ENST00000491294 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
ARPC1B-220ENST00000491294 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
ARPC1B-220ENST00000491294 ADAMTSL3P82987 1691 aa28.51■■■□□ 2.15
ARPC1B-220ENST00000491294 BCORL1Q5H9F3 1711 aa28.48■■■□□ 2.15
ARPC1B-220ENST00000491294 CDC42BPBQ9Y5S2 1711 aa28.47■■■□□ 2.15
ARPC1B-220ENST00000491294 ZNF518AQ6AHZ1 1483 aa28.46■■■□□ 2.15
ARPC1B-220ENST00000491294 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
ARPC1B-220ENST00000491294 PREX2Q70Z35 1606 aa28.45■■■□□ 2.14
ARPC1B-220ENST00000491294 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
ARPC1B-220ENST00000491294 PTPRMP28827 1452 aa28.43■■■□□ 2.14
ARPC1B-220ENST00000491294 ATP10AO60312 1499 aa28.41■■■□□ 2.14
ARPC1B-220ENST00000491294 MTUS2Q5JR59 1369 aa28.4■■■□□ 2.14
ARPC1B-220ENST00000491294 KDM5CP41229 1560 aa28.39■■■□□ 2.14
ARPC1B-220ENST00000491294 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
ARPC1B-220ENST00000491294 MYT1LQ9UL68 1186 aa28.38■■■□□ 2.13
ARPC1B-220ENST00000491294 MADDQ8WXG6 1647 aa28.38■■■□□ 2.13
ARPC1B-220ENST00000491294 GPATCH8Q9UKJ3 1502 aaKnown RBP28.38■■■□□ 2.13
ARPC1B-220ENST00000491294 HECW2Q9P2P5 1572 aa28.37■■■□□ 2.13
ARPC1B-220ENST00000491294 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
ARPC1B-220ENST00000491294 ABCC1P33527 1531 aa28.37■■■□□ 2.13
ARPC1B-220ENST00000491294 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
ARPC1B-220ENST00000491294 ZNF777Q9ULD5 760 aaPredicted RBP28.35■■■□□ 2.13
ARPC1B-220ENST00000491294 TRAPPC8Q9Y2L5 1435 aa28.35■■■□□ 2.13
ARPC1B-220ENST00000491294 MLECQ14165 292 aa28.34■■■□□ 2.13
ARPC1B-220ENST00000491294 CCNB3Q8WWL7 1395 aa28.34■■■□□ 2.13
ARPC1B-220ENST00000491294 SIGLEC1Q9BZZ2 1709 aa28.33■■■□□ 2.13
ARPC1B-220ENST00000491294 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
ARPC1B-220ENST00000491294 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
ARPC1B-220ENST00000491294 ITSN2Q9NZM3 1697 aa28.29■■■□□ 2.12
ARPC1B-220ENST00000491294 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
ARPC1B-220ENST00000491294 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
ARPC1B-220ENST00000491294 SAMD9LQ8IVG5 1584 aa28.26■■■□□ 2.11
ARPC1B-220ENST00000491294 HNRNPMP52272 730 aaKnown RBP eCLIP28.25■■■□□ 2.11
ARPC1B-220ENST00000491294 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
ARPC1B-220ENST00000491294 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
ARPC1B-220ENST00000491294 PLEKHH2Q8IVE3 1493 aa28.24■■■□□ 2.11
ARPC1B-220ENST00000491294 VPS8Q8N3P4 1428 aa28.23■■■□□ 2.11
ARPC1B-220ENST00000491294 SYCP2Q9BX26 1530 aa28.22■■■□□ 2.11
ARPC1B-220ENST00000491294 REREQ9P2R6 1566 aa28.21■■■□□ 2.11
ARPC1B-220ENST00000491294 ABCA6Q8N139 1617 aa28.2■■■□□ 2.1
ARPC1B-220ENST00000491294 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
ARPC1B-220ENST00000491294 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
ARPC1B-220ENST00000491294 TIAM1Q13009 1591 aa28.18■■■□□ 2.1
ARPC1B-220ENST00000491294 FER1L4A9Z1Z3 1794 aa28.17■■■□□ 2.1
ARPC1B-220ENST00000491294 KIDINS220Q9ULH0 1771 aa28.17■■■□□ 2.1
ARPC1B-220ENST00000491294 AGLP35573 1532 aa28.14■■■□□ 2.1
ARPC1B-220ENST00000491294 ZNF644Q9H582 1327 aaPredicted RBP28.14■■■□□ 2.09
ARPC1B-220ENST00000491294 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
ARPC1B-220ENST00000491294 SUPT6HQ7KZ85 1726 aaKnown RBP28.11■■■□□ 2.09
ARPC1B-220ENST00000491294 LMTK3Q96Q04 1460 aa28.1■■■□□ 2.09
ARPC1B-220ENST00000491294 LRRC9Q6ZRR7 1453 aa28.08■■■□□ 2.09
ARPC1B-220ENST00000491294 MBD5Q9P267 1494 aa28.07■■■□□ 2.08
ARPC1B-220ENST00000491294 ATP7AQ04656 1500 aa28.07■■■□□ 2.08
ARPC1B-220ENST00000491294 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
ARPC1B-220ENST00000491294 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
ARPC1B-220ENST00000491294 MAP3K1Q13233 1512 aa28.06■■■□□ 2.08
ARPC1B-220ENST00000491294 INO80Q9ULG1 1556 aaPredicted RBP28.03■■■□□ 2.08
ARPC1B-220ENST00000491294 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
ARPC1B-220ENST00000491294 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
ARPC1B-220ENST00000491294 A2MP01023 1474 aa28■■■□□ 2.07
ARPC1B-220ENST00000491294 HSPA2P54652 639 aa27.99■■■□□ 2.07
ARPC1B-220ENST00000491294 RTEL1-TNFRSF6BF6WH68 1400 aa27.99■■■□□ 2.07
ARPC1B-220ENST00000491294 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
ARPC1B-220ENST00000491294 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
ARPC1B-220ENST00000491294 APLP2Q06481 763 aa27.95■■■□□ 2.06
ARPC1B-220ENST00000491294 CCDC141Q6ZP82 1450 aa27.95■■■□□ 2.06
ARPC1B-220ENST00000491294 PLXNC1O60486 1568 aa27.94■■■□□ 2.06
ARPC1B-220ENST00000491294 SETD1BQ9UPS6 1966 aaKnown RBP27.92■■■□□ 2.06
ARPC1B-220ENST00000491294 ADGBQ8N7X0 1667 aa27.91■■■□□ 2.06
ARPC1B-220ENST00000491294 C3P01024 1663 aa27.89■■■□□ 2.06
ARPC1B-220ENST00000491294 PREX1Q8TCU6 1659 aa27.89■■■□□ 2.06
ARPC1B-220ENST00000491294 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
ARPC1B-220ENST00000491294 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
ARPC1B-220ENST00000491294 GGT6Q6P531 493 aa27.89■■■□□ 2.06
ARPC1B-220ENST00000491294 DHX29Q7Z478 1369 aaKnown RBP27.88■■■□□ 2.05
ARPC1B-220ENST00000491294 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
ARPC1B-220ENST00000491294 ARHGEF5Q12774 1597 aa27.87■■■□□ 2.05
ARPC1B-220ENST00000491294 UHRF1BP1Q6BDS2 1440 aa27.87■■■□□ 2.05
ARPC1B-220ENST00000491294 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
ARPC1B-220ENST00000491294 MYOM3Q5VTT5 1437 aa27.86■■■□□ 2.05
ARPC1B-220ENST00000491294 MIA2Q96PC5 1412 aa27.86■■■□□ 2.05
ARPC1B-220ENST00000491294 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
ARPC1B-220ENST00000491294 MROH2AA6NES4 1674 aa27.81■■■□□ 2.04
ARPC1B-220ENST00000491294 NPATQ14207 1427 aa27.79■■■□□ 2.04
ARPC1B-220ENST00000491294 KIF3BO15066 747 aa27.79■■■□□ 2.04
ARPC1B-220ENST00000491294 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
ARPC1B-220ENST00000491294 DMRT2Q9Y5R5 561 aa27.72■■■□□ 2.03
ARPC1B-220ENST00000491294 MAST1Q9Y2H9 1570 aa27.72■■■□□ 2.03
ARPC1B-220ENST00000491294 PTPRKQ15262 1439 aa27.7■■■□□ 2.03
ARPC1B-220ENST00000491294 WASHC2CQ9Y4E1 1318 aa27.66■■■□□ 2.02
ARPC1B-220ENST00000491294 PTPN23Q9H3S7 1636 aa27.65■■■□□ 2.02
ARPC1B-220ENST00000491294 FAM135AQ9P2D6 1515 aa27.65■■■□□ 2.02
ARPC1B-220ENST00000491294 STRCQ7RTU9 1775 aa27.65■■■□□ 2.02
ARPC1B-220ENST00000491294 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
ARPC1B-220ENST00000491294 FBXO41Q8TF61 875 aa27.64■■■□□ 2.02
ARPC1B-220ENST00000491294 ABCC5O15440 1437 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms