RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 NISCHQ9Y2I1 1504 aa43.8■■■■■ 4.6
ARPC1B-220ENST00000491294 CCDC180Q9P1Z9 1646 aa39.09■■■■□ 3.85
ARPC1B-220ENST00000491294 ABCC9O60706 1549 aa38.75■■■■□ 3.79
ARPC1B-220ENST00000491294 RB1CC1Q8TDY2 1594 aa37.05■■■■□ 3.52
ARPC1B-220ENST00000491294 NACADO15069 1562 aa36.91■■■■□ 3.5
ARPC1B-220ENST00000491294 DCAF8L2P0C7V8 631 aa36.87■■■■□ 3.49
ARPC1B-220ENST00000491294 MYO15BQ96JP2 1530 aa36.55■■■■□ 3.44
ARPC1B-220ENST00000491294 ZCCHC6Q5VYS8 1495 aaKnown RBP36.37■■■■□ 3.41
ARPC1B-220ENST00000491294 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
ARPC1B-220ENST00000491294 PABPN1Q86U42 306 aaKnown RBP eCLIP36.18■■■■□ 3.38
ARPC1B-220ENST00000491294 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
ARPC1B-220ENST00000491294 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
ARPC1B-220ENST00000491294 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
ARPC1B-220ENST00000491294 SCRIBQ14160 1630 aa35.64■■■■□ 3.3
ARPC1B-220ENST00000491294 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
ARPC1B-220ENST00000491294 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
ARPC1B-220ENST00000491294 CC2D2AQ9P2K1 1620 aa35■■■■□ 3.19
ARPC1B-220ENST00000491294 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
ARPC1B-220ENST00000491294 NCAPD3P42695 1498 aa34.1■■■■□ 3.05
ARPC1B-220ENST00000491294 SMARCA4P51532 1647 aa34.05■■■■□ 3.04
ARPC1B-220ENST00000491294 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
ARPC1B-220ENST00000491294 BAZ1AQ9NRL2 1556 aaPredicted RBP33.98■■■■□ 3.03
ARPC1B-220ENST00000491294 SMARCA2P51531 1590 aa33.95■■■■□ 3.03
ARPC1B-220ENST00000491294 HMGXB3Q12766 1538 aa33.84■■■■□ 3.01
ARPC1B-220ENST00000491294 MROH2BQ7Z745 1585 aa33.74■■■□□ 2.99
ARPC1B-220ENST00000491294 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
ARPC1B-220ENST00000491294 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
ARPC1B-220ENST00000491294 ERCC6Q03468 1493 aa33.44■■■□□ 2.94
ARPC1B-220ENST00000491294 NESP48681 1621 aa33.39■■■□□ 2.93
ARPC1B-220ENST00000491294 WIZO95785 1651 aa33.33■■■□□ 2.93
ARPC1B-220ENST00000491294 CUX2O14529 1486 aa33.26■■■□□ 2.92
ARPC1B-220ENST00000491294 LAMC3Q9Y6N6 1575 aa33.22■■■□□ 2.91
ARPC1B-220ENST00000491294 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
ARPC1B-220ENST00000491294 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
ARPC1B-220ENST00000491294 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
ARPC1B-220ENST00000491294 TOP2AP11388 1531 aaKnown RBP32.96■■■□□ 2.87
ARPC1B-220ENST00000491294 THOC2Q8NI27 1593 aaKnown RBP32.94■■■□□ 2.86
ARPC1B-220ENST00000491294 KIF21AQ7Z4S6 1674 aa32.91■■■□□ 2.86
ARPC1B-220ENST00000491294 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
ARPC1B-220ENST00000491294 CFTRP13569 1480 aa32.78■■■□□ 2.84
ARPC1B-220ENST00000491294 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
ARPC1B-220ENST00000491294 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
ARPC1B-220ENST00000491294 CEP164Q9UPV0 1460 aa32.67■■■□□ 2.82
ARPC1B-220ENST00000491294 WDR62O43379 1518 aa32.61■■■□□ 2.81
ARPC1B-220ENST00000491294 CCDC88BA6NC98 1476 aa32.61■■■□□ 2.81
ARPC1B-220ENST00000491294 PRDM2Q13029 1718 aa32.38■■■□□ 2.77
ARPC1B-220ENST00000491294 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
ARPC1B-220ENST00000491294 ABCC8Q09428 1581 aa32.11■■■□□ 2.73
ARPC1B-220ENST00000491294 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
ARPC1B-220ENST00000491294 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
ARPC1B-220ENST00000491294 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
ARPC1B-220ENST00000491294 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
ARPC1B-220ENST00000491294 ZNF608Q9ULD9 1512 aaPredicted RBP31.91■■■□□ 2.7
ARPC1B-220ENST00000491294 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
ARPC1B-220ENST00000491294 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
ARPC1B-220ENST00000491294 TARBP1Q13395 1621 aaKnown RBP31.75■■■□□ 2.67
ARPC1B-220ENST00000491294 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
ARPC1B-220ENST00000491294 SOGA1O94964 1423 aa31.7■■■□□ 2.67
ARPC1B-220ENST00000491294 AQRO60306 1485 aaKnown RBP eCLIP31.69■■■□□ 2.666e-8■■■■■ 42.2
ARPC1B-220ENST00000491294 RAD54L2Q9Y4B4 1467 aa31.68■■■□□ 2.66
ARPC1B-220ENST00000491294 CUX1P39880 1505 aa31.68■■■□□ 2.66
ARPC1B-220ENST00000491294 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
ARPC1B-220ENST00000491294 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
ARPC1B-220ENST00000491294 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
ARPC1B-220ENST00000491294 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
ARPC1B-220ENST00000491294 FBLN2P98095 1184 aa31.44■■■□□ 2.62
ARPC1B-220ENST00000491294 CHD1O14646 1710 aa31.38■■■□□ 2.61
ARPC1B-220ENST00000491294 GRIN2BQ13224 1484 aa31.36■■■□□ 2.61
ARPC1B-220ENST00000491294 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
ARPC1B-220ENST00000491294 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
ARPC1B-220ENST00000491294 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
ARPC1B-220ENST00000491294 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
ARPC1B-220ENST00000491294 GAPVD1Q14C86 1478 aa31.31■■■□□ 2.6
ARPC1B-220ENST00000491294 RIMBP3CA6NJZ7 1639 aa31.29■■■□□ 2.6
ARPC1B-220ENST00000491294 RIMBP3BA6NNM3 1639 aa31.29■■■□□ 2.6
ARPC1B-220ENST00000491294 RIMBP3Q9UFD9 1639 aa31.29■■■□□ 2.6
ARPC1B-220ENST00000491294 CHMP7Q8WUX9 453 aaPredicted RBP31.29■■■□□ 2.6
ARPC1B-220ENST00000491294 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
ARPC1B-220ENST00000491294 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
ARPC1B-220ENST00000491294 BIVM-ERCC5R4GMW8 1640 aa31.25■■■□□ 2.59
ARPC1B-220ENST00000491294 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
ARPC1B-220ENST00000491294 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
ARPC1B-220ENST00000491294 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.58
ARPC1B-220ENST00000491294 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
ARPC1B-220ENST00000491294 CYB5RLQ6IPT4 315 aa31.08■■■□□ 2.57
ARPC1B-220ENST00000491294 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
ARPC1B-220ENST00000491294 ARAP1Q96P48 1450 aa30.99■■■□□ 2.55
ARPC1B-220ENST00000491294 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
ARPC1B-220ENST00000491294 ADAMTS12P58397 1594 aa30.94■■■□□ 2.54
ARPC1B-220ENST00000491294 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
ARPC1B-220ENST00000491294 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
ARPC1B-220ENST00000491294 NUP160Q12769 1436 aa30.84■■■□□ 2.53
ARPC1B-220ENST00000491294 CEP170Q5SW79 1584 aa30.77■■■□□ 2.52
ARPC1B-220ENST00000491294 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
ARPC1B-220ENST00000491294 IGF1RP08069 1367 aa30.68■■■□□ 2.5
ARPC1B-220ENST00000491294 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
ARPC1B-220ENST00000491294 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
ARPC1B-220ENST00000491294 TRHP20396 242 aaPredicted RBP30.6■■■□□ 2.49
ARPC1B-220ENST00000491294 JPH4Q96JJ6 628 aa30.58■■■□□ 2.49
ARPC1B-220ENST00000491294 CUL7Q14999 1698 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms