RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
TRA2A-208ENST00000490942 PREX2Q70Z35 1606 aa24.69■■□□□ 1.54
TRA2A-208ENST00000490942 CDC42BPAQ5VT25 1732 aa24.65■■□□□ 1.54
TRA2A-208ENST00000490942 ARHGAP5Q13017 1502 aa24.65■■□□□ 1.54
TRA2A-208ENST00000490942 AKNAQ7Z591 1439 aa24.64■■□□□ 1.54
TRA2A-208ENST00000490942 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
TRA2A-208ENST00000490942 CDC42BPBQ9Y5S2 1711 aa24.62■■□□□ 1.53
TRA2A-208ENST00000490942 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
TRA2A-208ENST00000490942 KDM6BO15054 1643 aa24.61■■□□□ 1.53
TRA2A-208ENST00000490942 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
TRA2A-208ENST00000490942 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
TRA2A-208ENST00000490942 ADGRL1O94910 1474 aa24.58■■□□□ 1.52
TRA2A-208ENST00000490942 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.52
TRA2A-208ENST00000490942 COL17A1Q9UMD9 1497 aaPredicted RBP24.57■■□□□ 1.52
TRA2A-208ENST00000490942 KIAA1107Q9UPP5 1409 aa24.56■■□□□ 1.52
TRA2A-208ENST00000490942 DENND4BO75064 1496 aaPredicted RBP24.54■■□□□ 1.52
TRA2A-208ENST00000490942 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
TRA2A-208ENST00000490942 ABCC1P33527 1531 aa24.52■■□□□ 1.52
TRA2A-208ENST00000490942 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
TRA2A-208ENST00000490942 POGZQ7Z3K3 1410 aa24.5■■□□□ 1.51
TRA2A-208ENST00000490942 ZNF518AQ6AHZ1 1483 aa24.47■■□□□ 1.51
TRA2A-208ENST00000490942 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
TRA2A-208ENST00000490942 RSPH4AQ5TD94 716 aa24.46■■□□□ 1.51
TRA2A-208ENST00000490942 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.51
TRA2A-208ENST00000490942 RICTORQ6R327 1708 aa24.45■■□□□ 1.5
TRA2A-208ENST00000490942 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.5
TRA2A-208ENST00000490942 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
TRA2A-208ENST00000490942 ARHGEF12Q9NZN5 1544 aa24.44■■□□□ 1.5
TRA2A-208ENST00000490942 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
TRA2A-208ENST00000490942 MAGI2Q86UL8 1455 aa24.44■■□□□ 1.5
TRA2A-208ENST00000490942 RAPGEF3O95398 923 aa24.43■■□□□ 1.5
TRA2A-208ENST00000490942 KDM5CP41229 1560 aa24.42■■□□□ 1.5
TRA2A-208ENST00000490942 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
TRA2A-208ENST00000490942 MBD5Q9P267 1494 aa24.42■■□□□ 1.5
TRA2A-208ENST00000490942 SYCP2Q9BX26 1530 aa24.41■■□□□ 1.5
TRA2A-208ENST00000490942 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
TRA2A-208ENST00000490942 ARHGEF5Q12774 1597 aa24.39■■□□□ 1.5
TRA2A-208ENST00000490942 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.5
TRA2A-208ENST00000490942 MLH3Q9UHC1 1453 aa24.38■■□□□ 1.49
TRA2A-208ENST00000490942 PTPN23Q9H3S7 1636 aa24.37■■□□□ 1.49
TRA2A-208ENST00000490942 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRA2A-208ENST00000490942 AFAP1Q8N556 730 aa24.36■■□□□ 1.49
TRA2A-208ENST00000490942 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
TRA2A-208ENST00000490942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.35■■□□□ 1.491e-7■■□□□ 12.6
TRA2A-208ENST00000490942 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
TRA2A-208ENST00000490942 HECW2Q9P2P5 1572 aa24.32■■□□□ 1.48
TRA2A-208ENST00000490942 RTEL1-TNFRSF6BF6WH68 1400 aa24.31■■□□□ 1.48
TRA2A-208ENST00000490942 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
TRA2A-208ENST00000490942 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
TRA2A-208ENST00000490942 ARHGEF40Q8TER5 1519 aa24.29■■□□□ 1.48
TRA2A-208ENST00000490942 SPAG9O60271 1321 aaKnown RBP24.29■■□□□ 1.48
TRA2A-208ENST00000490942 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
TRA2A-208ENST00000490942 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
TRA2A-208ENST00000490942 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
TRA2A-208ENST00000490942 INO80Q9ULG1 1556 aaPredicted RBP24.26■■□□□ 1.47
TRA2A-208ENST00000490942 MAST1Q9Y2H9 1570 aa24.25■■□□□ 1.47
TRA2A-208ENST00000490942 ATP7AQ04656 1500 aa24.25■■□□□ 1.47
TRA2A-208ENST00000490942 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
TRA2A-208ENST00000490942 ABCC5O15440 1437 aa24.24■■□□□ 1.47
TRA2A-208ENST00000490942 YEATS2Q9ULM3 1422 aa24.24■■□□□ 1.47
TRA2A-208ENST00000490942 DAPK1P53355 1430 aa24.23■■□□□ 1.47
TRA2A-208ENST00000490942 ATP10AO60312 1499 aa24.23■■□□□ 1.47
TRA2A-208ENST00000490942 KIDINS220Q9ULH0 1771 aa24.23■■□□□ 1.47
TRA2A-208ENST00000490942 REREQ9P2R6 1566 aa24.22■■□□□ 1.47
TRA2A-208ENST00000490942 FAM50AQ14320 339 aaKnown RBP24.22■■□□□ 1.47
TRA2A-208ENST00000490942 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.46
TRA2A-208ENST00000490942 C9orf84Q5VXU9 1444 aa24.19■■□□□ 1.46
TRA2A-208ENST00000490942 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
TRA2A-208ENST00000490942 CROCC2H7BZ55 1655 aa24.18■■□□□ 1.46
TRA2A-208ENST00000490942 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
TRA2A-208ENST00000490942 PLXNC1O60486 1568 aa24.14■■□□□ 1.45
TRA2A-208ENST00000490942 AGLP35573 1532 aa24.13■■□□□ 1.45
TRA2A-208ENST00000490942 ADGRL2O95490 1459 aa24.13■■□□□ 1.45
TRA2A-208ENST00000490942 ADGBQ8N7X0 1667 aa24.12■■□□□ 1.45
TRA2A-208ENST00000490942 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
TRA2A-208ENST00000490942 A2MP01023 1474 aa24.11■■□□□ 1.45
TRA2A-208ENST00000490942 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
TRA2A-208ENST00000490942 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
TRA2A-208ENST00000490942 NCOA1Q15788 1441 aa24.09■■□□□ 1.45
TRA2A-208ENST00000490942 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
TRA2A-208ENST00000490942 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
TRA2A-208ENST00000490942 KIF15Q9NS87 1388 aa24.04■■□□□ 1.44
TRA2A-208ENST00000490942 ARID4BQ4LE39 1312 aaPredicted RBP24.02■■□□□ 1.44
TRA2A-208ENST00000490942 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
TRA2A-208ENST00000490942 BCORL1Q5H9F3 1711 aa24.01■■□□□ 1.43
TRA2A-208ENST00000490942 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
TRA2A-208ENST00000490942 SIGLEC1Q9BZZ2 1709 aa24■■□□□ 1.43
TRA2A-208ENST00000490942 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
TRA2A-208ENST00000490942 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
TRA2A-208ENST00000490942 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
TRA2A-208ENST00000490942 ITGAEP38570 1179 aa23.95■■□□□ 1.42
TRA2A-208ENST00000490942 FAM135AQ9P2D6 1515 aa23.94■■□□□ 1.42
TRA2A-208ENST00000490942 ADAMTSL3P82987 1691 aa23.93■■□□□ 1.42
TRA2A-208ENST00000490942 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
TRA2A-208ENST00000490942 KIF3BO15066 747 aa23.91■■□□□ 1.42
TRA2A-208ENST00000490942 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
TRA2A-208ENST00000490942 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
TRA2A-208ENST00000490942 KDM4FA0A1W2PPD8 638 aa23.89■■□□□ 1.41
TRA2A-208ENST00000490942 CNTLNQ9NXG0 1405 aa23.88■■□□□ 1.41
TRA2A-208ENST00000490942 NAIPQ13075 1403 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms