RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.93
FN1-223ENST00000490833 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
FN1-223ENST00000490833 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
FN1-223ENST00000490833 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.94
FN1-223ENST00000490833 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
FN1-223ENST00000490833 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
FN1-223ENST00000490833 IFT140Q96RY7 1462 aa9.19□□□□□ -0.94
FN1-223ENST00000490833 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
FN1-223ENST00000490833 ABCA5Q8WWZ7 1642 aa9.19□□□□□ -0.94
FN1-223ENST00000490833 NESP48681 1621 aa9.18□□□□□ -0.94
FN1-223ENST00000490833 CCDC18Q5T9S5 1454 aa9.18□□□□□ -0.94
FN1-223ENST00000490833 PHF12Q96QT6 1004 aa9.18□□□□□ -0.94
FN1-223ENST00000490833 SETD5Q9C0A6 1442 aa9.18□□□□□ -0.94
FN1-223ENST00000490833 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
FN1-223ENST00000490833 CTTNBP2Q8WZ74 1663 aa9.17□□□□□ -0.94
FN1-223ENST00000490833 GRIN2BQ13224 1484 aa9.17□□□□□ -0.94
FN1-223ENST00000490833 MTUS2Q5JR59 1369 aa9.16□□□□□ -0.94
FN1-223ENST00000490833 DHX57Q6P158 1386 aaKnown RBP9.16□□□□□ -0.94
FN1-223ENST00000490833 C7P10643 843 aa9.16□□□□□ -0.94
FN1-223ENST00000490833 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
FN1-223ENST00000490833 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.94
FN1-223ENST00000490833 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
FN1-223ENST00000490833 CFAP43Q8NDM7 1665 aa9.14□□□□□ -0.95
FN1-223ENST00000490833 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
FN1-223ENST00000490833 SAMD9Q5K651 1589 aa9.13□□□□□ -0.95
FN1-223ENST00000490833 ASTLQ6HA08 431 aaPredicted RBP9.13□□□□□ -0.95
FN1-223ENST00000490833 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
FN1-223ENST00000490833 TARBP1Q13395 1621 aaKnown RBP9.13□□□□□ -0.95
FN1-223ENST00000490833 FAM50AQ14320 339 aaKnown RBP9.11□□□□□ -0.95
FN1-223ENST00000490833 SCUBE2Q9NQ36 999 aa9.11□□□□□ -0.95
FN1-223ENST00000490833 FHOD3Q2V2M9 1422 aa9.11□□□□□ -0.95
FN1-223ENST00000490833 ATMINO43313 823 aaPredicted RBP9.1□□□□□ -0.95
FN1-223ENST00000490833 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
FN1-223ENST00000490833 RAB3GAP2Q9H2M9 1393 aa9.1□□□□□ -0.95
FN1-223ENST00000490833 WDR62O43379 1518 aa9.1□□□□□ -0.95
FN1-223ENST00000490833 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
FN1-223ENST00000490833 MNX1P50219 401 aaPredicted RBP9.09□□□□□ -0.95
FN1-223ENST00000490833 EHBP1L1Q8N3D4 1523 aa9.09□□□□□ -0.95
FN1-223ENST00000490833 PHLDB1Q86UU1 1377 aa9.09□□□□□ -0.95
FN1-223ENST00000490833 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
FN1-223ENST00000490833 IQGAP2Q13576 1575 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 MYOM3Q5VTT5 1437 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 FGD6Q6ZV73 1430 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 UGGT2Q9NYU1 1516 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 SNAPC4Q5SXM2 1469 aa9.08□□□□□ -0.96
FN1-223ENST00000490833 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
FN1-223ENST00000490833 AKNAQ7Z591 1439 aa9.07□□□□□ -0.96
FN1-223ENST00000490833 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
FN1-223ENST00000490833 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
FN1-223ENST00000490833 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
FN1-223ENST00000490833 SUPT6HQ7KZ85 1726 aaKnown RBP9.06□□□□□ -0.96
FN1-223ENST00000490833 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
FN1-223ENST00000490833 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
FN1-223ENST00000490833 ERCC6Q03468 1493 aa9.05□□□□□ -0.96
FN1-223ENST00000490833 ADAMTS12P58397 1594 aa9.04□□□□□ -0.96
FN1-223ENST00000490833 ITGAEP38570 1179 aa9.04□□□□□ -0.96
FN1-223ENST00000490833 PROM2Q8N271 834 aa9.04□□□□□ -0.96
FN1-223ENST00000490833 UACAQ9BZF9 1416 aa9.04□□□□□ -0.96
FN1-223ENST00000490833 PBRM1Q86U86 1689 aa9.04□□□□□ -0.96
FN1-223ENST00000490833 CHMP7Q8WUX9 453 aaPredicted RBP9.03□□□□□ -0.96
FN1-223ENST00000490833 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
FN1-223ENST00000490833 NCOA2Q15596 1464 aa9.02□□□□□ -0.96
FN1-223ENST00000490833 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
FN1-223ENST00000490833 ROCK1Q13464 1354 aa9.01□□□□□ -0.97
FN1-223ENST00000490833 MIER1Q8N108 512 aa9.01□□□□□ -0.97
FN1-223ENST00000490833 SYNJ2O15056 1496 aa9.01□□□□□ -0.97
FN1-223ENST00000490833 ARHGEF11O15085 1522 aa9□□□□□ -0.97
FN1-223ENST00000490833 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
FN1-223ENST00000490833 GRIN2AQ12879 1464 aa9□□□□□ -0.97
FN1-223ENST00000490833 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
FN1-223ENST00000490833 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
FN1-223ENST00000490833 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
FN1-223ENST00000490833 POTEFA5A3E0 1075 aa8.97□□□□□ -0.97
FN1-223ENST00000490833 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
FN1-223ENST00000490833 PLCD3Q8N3E9 789 aa8.97□□□□□ -0.97
FN1-223ENST00000490833 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
FN1-223ENST00000490833 NAIPQ13075 1403 aa8.96□□□□□ -0.98
FN1-223ENST00000490833 PTPN23Q9H3S7 1636 aa8.95□□□□□ -0.98
FN1-223ENST00000490833 PLEKHD1A6NEE1 506 aa8.95□□□□□ -0.98
FN1-223ENST00000490833 JPH4Q96JJ6 628 aa8.95□□□□□ -0.98
FN1-223ENST00000490833 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
FN1-223ENST00000490833 NUP160Q12769 1436 aa8.94□□□□□ -0.98
FN1-223ENST00000490833 MAPKBP1O60336 1514 aa8.94□□□□□ -0.98
FN1-223ENST00000490833 KIAA0556O60303 1618 aa8.94□□□□□ -0.98
FN1-223ENST00000490833 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
FN1-223ENST00000490833 TROQ12816 1431 aaPredicted RBP8.93□□□□□ -0.98
FN1-223ENST00000490833 DISP1Q96F81 1524 aa8.92□□□□□ -0.98
FN1-223ENST00000490833 CCER2I3L3R5 266 aa8.92□□□□□ -0.98
FN1-223ENST00000490833 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
FN1-223ENST00000490833 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
FN1-223ENST00000490833 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
FN1-223ENST00000490833 CFDP1Q9UEE9 299 aaPredicted RBP8.91□□□□□ -0.98
FN1-223ENST00000490833 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
FN1-223ENST00000490833 ANP32CO43423 234 aa8.9□□□□□ -0.98
FN1-223ENST00000490833 TSPY4P0CV99 314 aa8.89□□□□□ -0.99
FN1-223ENST00000490833 TSPY10P0CW01 314 aa8.89□□□□□ -0.99
FN1-223ENST00000490833 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
FN1-223ENST00000490833 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
FN1-223ENST00000490833 ANKRD30AQ9BXX3 1397 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms