RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 NLRP6P59044 892 aa11.5□□□□□ -0.57
PRPF4B-207ENST00000490399 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
PRPF4B-207ENST00000490399 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
PRPF4B-207ENST00000490399 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
PRPF4B-207ENST00000490399 SNPHO15079 494 aa11.46□□□□□ -0.57
PRPF4B-207ENST00000490399 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
PRPF4B-207ENST00000490399 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
PRPF4B-207ENST00000490399 PPP1R37O75864 691 aa11.38□□□□□ -0.59
PRPF4B-207ENST00000490399 RYDENQ9NUL5 291 aaKnown RBP11.38□□□□□ -0.59
PRPF4B-207ENST00000490399 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
PRPF4B-207ENST00000490399 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
PRPF4B-207ENST00000490399 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
PRPF4B-207ENST00000490399 EMP3P54852 163 aa11.29□□□□□ -0.6
PRPF4B-207ENST00000490399 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
PRPF4B-207ENST00000490399 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
PRPF4B-207ENST00000490399 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
PRPF4B-207ENST00000490399 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
PRPF4B-207ENST00000490399 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
PRPF4B-207ENST00000490399 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
PRPF4B-207ENST00000490399 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
PRPF4B-207ENST00000490399 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
PRPF4B-207ENST00000490399 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
PRPF4B-207ENST00000490399 KIF3CO14782 793 aa11.22□□□□□ -0.61
PRPF4B-207ENST00000490399 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
PRPF4B-207ENST00000490399 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
PRPF4B-207ENST00000490399 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
PRPF4B-207ENST00000490399 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
PRPF4B-207ENST00000490399 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
PRPF4B-207ENST00000490399 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
PRPF4B-207ENST00000490399 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
PRPF4B-207ENST00000490399 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
PRPF4B-207ENST00000490399 ARSIQ5FYB1 569 aa11.14□□□□□ -0.63
PRPF4B-207ENST00000490399 ERBB3P21860 1342 aa11.13□□□□□ -0.63
PRPF4B-207ENST00000490399 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.635e-6■□□□□ 10.9
PRPF4B-207ENST00000490399 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
PRPF4B-207ENST00000490399 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-207ENST00000490399 LARP6Q9BRS8 491 aaKnown RBP11.07□□□□□ -0.64
PRPF4B-207ENST00000490399 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
PRPF4B-207ENST00000490399 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
PRPF4B-207ENST00000490399 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
PRPF4B-207ENST00000490399 DSG2Q14126 1118 aa11.06□□□□□ -0.64
PRPF4B-207ENST00000490399 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
PRPF4B-207ENST00000490399 FOXK1P85037 733 aa11.05□□□□□ -0.64
PRPF4B-207ENST00000490399 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
PRPF4B-207ENST00000490399 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
PRPF4B-207ENST00000490399 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
PRPF4B-207ENST00000490399 SLC34A2O95436 690 aa11.04□□□□□ -0.64
PRPF4B-207ENST00000490399 NUDT7P0C024 238 aa11.04□□□□□ -0.64
PRPF4B-207ENST00000490399 PDE4AP27815 886 aa11.04□□□□□ -0.64
PRPF4B-207ENST00000490399 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
PRPF4B-207ENST00000490399 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
PRPF4B-207ENST00000490399 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-207ENST00000490399 MFSD10Q14728 455 aa10.98□□□□□ -0.65
PRPF4B-207ENST00000490399 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
PRPF4B-207ENST00000490399 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
PRPF4B-207ENST00000490399 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
PRPF4B-207ENST00000490399 PPP1R15BQ5SWA1 713 aa10.95□□□□□ -0.66
PRPF4B-207ENST00000490399 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
PRPF4B-207ENST00000490399 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
PRPF4B-207ENST00000490399 E2F4Q16254 413 aa10.93□□□□□ -0.66
PRPF4B-207ENST00000490399 UPF1Q92900 1129 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF4B-207ENST00000490399 KDM4FA0A1W2PPD8 638 aa10.9□□□□□ -0.66
PRPF4B-207ENST00000490399 TBC1D12O60347 775 aa10.88□□□□□ -0.67
PRPF4B-207ENST00000490399 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
PRPF4B-207ENST00000490399 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
PRPF4B-207ENST00000490399 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
PRPF4B-207ENST00000490399 BCANQ96GW7 911 aa10.86□□□□□ -0.67
PRPF4B-207ENST00000490399 EMILIN3Q9NT22 766 aa10.85□□□□□ -0.67
PRPF4B-207ENST00000490399 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
PRPF4B-207ENST00000490399 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
PRPF4B-207ENST00000490399 NBR1Q14596 966 aa10.83□□□□□ -0.68
PRPF4B-207ENST00000490399 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
PRPF4B-207ENST00000490399 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
PRPF4B-207ENST00000490399 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
PRPF4B-207ENST00000490399 PBX2P40425 430 aa10.81□□□□□ -0.68
PRPF4B-207ENST00000490399 ARHGEF1Q92888 912 aaKnown RBP10.81□□□□□ -0.68
PRPF4B-207ENST00000490399 DPYSL4O14531 572 aa10.8□□□□□ -0.68
PRPF4B-207ENST00000490399 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
PRPF4B-207ENST00000490399 EVI5O60447 810 aa10.76□□□□□ -0.69
PRPF4B-207ENST00000490399 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
PRPF4B-207ENST00000490399 PSEN2P49810 448 aa10.75□□□□□ -0.69
PRPF4B-207ENST00000490399 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
PRPF4B-207ENST00000490399 ZNF454Q8N9F8 522 aa10.75□□□□□ -0.69
PRPF4B-207ENST00000490399 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
PRPF4B-207ENST00000490399 SEMA3EO15041 775 aa10.74□□□□□ -0.69
PRPF4B-207ENST00000490399 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-207ENST00000490399 ARIH1Q9Y4X5 557 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-207ENST00000490399 DMRTA1Q5VZB9 504 aa10.73□□□□□ -0.69
PRPF4B-207ENST00000490399 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
PRPF4B-207ENST00000490399 PTGER2P43116 358 aa10.7□□□□□ -0.7
PRPF4B-207ENST00000490399 FOSBP53539 338 aa10.7□□□□□ -0.7
PRPF4B-207ENST00000490399 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
PRPF4B-207ENST00000490399 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
PRPF4B-207ENST00000490399 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
PRPF4B-207ENST00000490399 MLLT3P42568 568 aaPredicted RBP10.67□□□□□ -0.7
PRPF4B-207ENST00000490399 PDIA6Q15084 440 aa10.67□□□□□ -0.7
PRPF4B-207ENST00000490399 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
PRPF4B-207ENST00000490399 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
PRPF4B-207ENST00000490399 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
PRPF4B-207ENST00000490399 SPDYE16A6NNV3 312 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms