RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CASKIN1Q8WXD9 1431 aa15.51■□□□□ 0.07
CCT3-213ENST00000489870 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
CCT3-213ENST00000489870 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
CCT3-213ENST00000489870 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
CCT3-213ENST00000489870 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
CCT3-213ENST00000489870 BCORL1Q5H9F3 1711 aa15.49■□□□□ 0.07
CCT3-213ENST00000489870 PTPRMP28827 1452 aa15.49■□□□□ 0.07
CCT3-213ENST00000489870 ARHGEF40Q8TER5 1519 aa15.48■□□□□ 0.07
CCT3-213ENST00000489870 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
CCT3-213ENST00000489870 MYO5CQ9NQX4 1742 aa15.48■□□□□ 0.07
CCT3-213ENST00000489870 KIF14Q15058 1648 aa15.47■□□□□ 0.07
CCT3-213ENST00000489870 ZFYVE16Q7Z3T8 1539 aa15.46■□□□□ 0.07
CCT3-213ENST00000489870 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.06
CCT3-213ENST00000489870 ATP10AO60312 1499 aa15.45■□□□□ 0.06
CCT3-213ENST00000489870 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
CCT3-213ENST00000489870 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
CCT3-213ENST00000489870 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
CCT3-213ENST00000489870 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
CCT3-213ENST00000489870 YEATS2Q9ULM3 1422 aa15.4■□□□□ 0.06
CCT3-213ENST00000489870 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
CCT3-213ENST00000489870 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
CCT3-213ENST00000489870 KDM5CP41229 1560 aa15.38■□□□□ 0.05
CCT3-213ENST00000489870 MADDQ8WXG6 1647 aa15.38■□□□□ 0.05
CCT3-213ENST00000489870 REREQ9P2R6 1566 aa15.37■□□□□ 0.05
CCT3-213ENST00000489870 AFAP1Q8N556 730 aa15.37■□□□□ 0.05
CCT3-213ENST00000489870 LRRIQ1Q96JM4 1722 aa15.37■□□□□ 0.05
CCT3-213ENST00000489870 CDC42BPBQ9Y5S2 1711 aa15.36■□□□□ 0.05
CCT3-213ENST00000489870 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
CCT3-213ENST00000489870 PREX2Q70Z35 1606 aa15.34■□□□□ 0.05
CCT3-213ENST00000489870 KIAA1107Q9UPP5 1409 aa15.34■□□□□ 0.05
CCT3-213ENST00000489870 PLEKHH2Q8IVE3 1493 aa15.33■□□□□ 0.05
CCT3-213ENST00000489870 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.05
CCT3-213ENST00000489870 AGLP35573 1532 aa15.33■□□□□ 0.04
CCT3-213ENST00000489870 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
CCT3-213ENST00000489870 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
CCT3-213ENST00000489870 LMTK3Q96Q04 1460 aa15.31■□□□□ 0.04
CCT3-213ENST00000489870 ABCC1P33527 1531 aa15.3■□□□□ 0.04
CCT3-213ENST00000489870 MYT1LQ9UL68 1186 aa15.3■□□□□ 0.04
CCT3-213ENST00000489870 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
CCT3-213ENST00000489870 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
CCT3-213ENST00000489870 FER1L4A9Z1Z3 1794 aa15.29■□□□□ 0.04
CCT3-213ENST00000489870 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
CCT3-213ENST00000489870 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
CCT3-213ENST00000489870 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
CCT3-213ENST00000489870 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
CCT3-213ENST00000489870 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
CCT3-213ENST00000489870 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.04
CCT3-213ENST00000489870 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
CCT3-213ENST00000489870 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
CCT3-213ENST00000489870 MLECQ14165 292 aa15.27■□□□□ 0.04
CCT3-213ENST00000489870 FBXO41Q8TF61 875 aa15.26■□□□□ 0.03
CCT3-213ENST00000489870 DIP2CQ9Y2E4 1556 aa15.26■□□□□ 0.03
CCT3-213ENST00000489870 SIGLEC1Q9BZZ2 1709 aa15.26■□□□□ 0.03
CCT3-213ENST00000489870 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
CCT3-213ENST00000489870 SPAG9O60271 1321 aaKnown RBP15.25■□□□□ 0.03
CCT3-213ENST00000489870 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
CCT3-213ENST00000489870 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
CCT3-213ENST00000489870 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
CCT3-213ENST00000489870 SAMD9LQ8IVG5 1584 aa15.21■□□□□ 0.03
CCT3-213ENST00000489870 HNRNPMP52272 730 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCT3-213ENST00000489870 ABCA6Q8N139 1617 aa15.21■□□□□ 0.02
CCT3-213ENST00000489870 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
CCT3-213ENST00000489870 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
CCT3-213ENST00000489870 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
CCT3-213ENST00000489870 UHRF1BP1Q6BDS2 1440 aa15.18■□□□□ 0.02
CCT3-213ENST00000489870 NPATQ14207 1427 aa15.17■□□□□ 0.02
CCT3-213ENST00000489870 HSPA2P54652 639 aa15.17■□□□□ 0.02
CCT3-213ENST00000489870 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
CCT3-213ENST00000489870 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
CCT3-213ENST00000489870 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
CCT3-213ENST00000489870 MROH2AA6NES4 1674 aa15.15■□□□□ 0.02
CCT3-213ENST00000489870 A2MP01023 1474 aa15.14■□□□□ 0.01
CCT3-213ENST00000489870 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
CCT3-213ENST00000489870 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
CCT3-213ENST00000489870 ZMYM3Q14202 1370 aa15.13■□□□□ 0.01
CCT3-213ENST00000489870 C3P01024 1663 aa15.12■□□□□ 0.01
CCT3-213ENST00000489870 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
CCT3-213ENST00000489870 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
CCT3-213ENST00000489870 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
CCT3-213ENST00000489870 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
CCT3-213ENST00000489870 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
CCT3-213ENST00000489870 PTPRTO14522 1441 aa15.11■□□□□ 0.01
CCT3-213ENST00000489870 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
CCT3-213ENST00000489870 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
CCT3-213ENST00000489870 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
CCT3-213ENST00000489870 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
CCT3-213ENST00000489870 CERKQ8TCT0 537 aa15.1■□□□□ 0.01
CCT3-213ENST00000489870 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
CCT3-213ENST00000489870 NCOA2Q15596 1464 aa15.09■□□□□ 0.01
CCT3-213ENST00000489870 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
CCT3-213ENST00000489870 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
CCT3-213ENST00000489870 GGT6Q6P531 493 aa15.06■□□□□ 0
CCT3-213ENST00000489870 MIA2Q96PC5 1412 aa15.06■□□□□ 0
CCT3-213ENST00000489870 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
CCT3-213ENST00000489870 STRCQ7RTU9 1775 aa15.06■□□□□ 0
CCT3-213ENST00000489870 PKD2Q13563 968 aa15.05■□□□□ -0
CCT3-213ENST00000489870 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
CCT3-213ENST00000489870 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
CCT3-213ENST00000489870 PTPRKQ15262 1439 aa15.02■□□□□ -0
CCT3-213ENST00000489870 NCOA1Q15788 1441 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms