RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
CNOT9-207ENST00000489687 RAPGEF3O95398 923 aa9.52□□□□□ -0.89
CNOT9-207ENST00000489687 ATP1B4Q9UN42 357 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-207ENST00000489687 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
CNOT9-207ENST00000489687 RICTORQ6R327 1708 aa9.51□□□□□ -0.89
CNOT9-207ENST00000489687 HECW2Q9P2P5 1572 aa9.51□□□□□ -0.89
CNOT9-207ENST00000489687 FANCAO15360 1455 aa9.51□□□□□ -0.89
CNOT9-207ENST00000489687 NEO1Q92859 1461 aa9.51□□□□□ -0.89
CNOT9-207ENST00000489687 SIGLEC1Q9BZZ2 1709 aa9.5□□□□□ -0.89
CNOT9-207ENST00000489687 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
CNOT9-207ENST00000489687 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
CNOT9-207ENST00000489687 MYO5CQ9NQX4 1742 aa9.48□□□□□ -0.89
CNOT9-207ENST00000489687 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
CNOT9-207ENST00000489687 APLP2Q06481 763 aa9.48□□□□□ -0.89
CNOT9-207ENST00000489687 MADDQ8WXG6 1647 aa9.48□□□□□ -0.89
CNOT9-207ENST00000489687 AKNAQ7Z591 1439 aa9.47□□□□□ -0.89
CNOT9-207ENST00000489687 ADAMTSL3P82987 1691 aa9.46□□□□□ -0.89
CNOT9-207ENST00000489687 BCORL1Q5H9F3 1711 aa9.46□□□□□ -0.89
CNOT9-207ENST00000489687 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
CNOT9-207ENST00000489687 DENND4BO75064 1496 aaPredicted RBP9.46□□□□□ -0.9
CNOT9-207ENST00000489687 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
CNOT9-207ENST00000489687 ZFYVE16Q7Z3T8 1539 aa9.45□□□□□ -0.9
CNOT9-207ENST00000489687 RIMS1Q86UR5 1692 aaKnown RBP9.45□□□□□ -0.9
CNOT9-207ENST00000489687 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
CNOT9-207ENST00000489687 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
CNOT9-207ENST00000489687 ARHGAP5Q13017 1502 aa9.44□□□□□ -0.9
CNOT9-207ENST00000489687 TROQ12816 1431 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-207ENST00000489687 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
CNOT9-207ENST00000489687 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-207ENST00000489687 SAMD1Q6SPF0 538 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-207ENST00000489687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.43□□□□□ -0.9
CNOT9-207ENST00000489687 PTPRMP28827 1452 aa9.42□□□□□ -0.9
CNOT9-207ENST00000489687 CLIP1P30622 1438 aa9.42□□□□□ -0.9
CNOT9-207ENST00000489687 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
CNOT9-207ENST00000489687 CDC42BPBQ9Y5S2 1711 aa9.42□□□□□ -0.9
CNOT9-207ENST00000489687 PREX2Q70Z35 1606 aa9.42□□□□□ -0.9
CNOT9-207ENST00000489687 FYCO1Q9BQS8 1478 aa9.41□□□□□ -0.9
CNOT9-207ENST00000489687 PLCH2O75038 1416 aa9.41□□□□□ -0.9
CNOT9-207ENST00000489687 CASKIN1Q8WXD9 1431 aa9.41□□□□□ -0.9
CNOT9-207ENST00000489687 SCAPERQ9BY12 1400 aa9.41□□□□□ -0.9
CNOT9-207ENST00000489687 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
CNOT9-207ENST00000489687 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
CNOT9-207ENST00000489687 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.91
CNOT9-207ENST00000489687 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
CNOT9-207ENST00000489687 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
CNOT9-207ENST00000489687 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
CNOT9-207ENST00000489687 ABCC1P33527 1531 aa9.38□□□□□ -0.91
CNOT9-207ENST00000489687 MLECQ14165 292 aa9.38□□□□□ -0.91
CNOT9-207ENST00000489687 KDM5CP41229 1560 aa9.37□□□□□ -0.91
CNOT9-207ENST00000489687 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
CNOT9-207ENST00000489687 ARHGEF12Q9NZN5 1544 aa9.36□□□□□ -0.91
CNOT9-207ENST00000489687 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
CNOT9-207ENST00000489687 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-207ENST00000489687 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
CNOT9-207ENST00000489687 LMTK3Q96Q04 1460 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 C9orf84Q5VXU9 1444 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 SAMD9LQ8IVG5 1584 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 TRAPPC8Q9Y2L5 1435 aa9.35□□□□□ -0.91
CNOT9-207ENST00000489687 MAGI2Q86UL8 1455 aa9.34□□□□□ -0.91
CNOT9-207ENST00000489687 AFAP1Q8N556 730 aa9.34□□□□□ -0.91
CNOT9-207ENST00000489687 ATP10AO60312 1499 aa9.33□□□□□ -0.92
CNOT9-207ENST00000489687 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
CNOT9-207ENST00000489687 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
CNOT9-207ENST00000489687 TIAM1Q13009 1591 aa9.32□□□□□ -0.92
CNOT9-207ENST00000489687 HSPA2P54652 639 aa9.31□□□□□ -0.92
CNOT9-207ENST00000489687 ZNF777Q9ULD5 760 aaPredicted RBP9.31□□□□□ -0.92
CNOT9-207ENST00000489687 GPATCH8Q9UKJ3 1502 aaKnown RBP9.31□□□□□ -0.92
CNOT9-207ENST00000489687 EHBP1L1Q8N3D4 1523 aa9.3□□□□□ -0.92
CNOT9-207ENST00000489687 MTUS2Q5JR59 1369 aa9.29□□□□□ -0.92
CNOT9-207ENST00000489687 INO80Q9ULG1 1556 aaPredicted RBP9.29□□□□□ -0.92
CNOT9-207ENST00000489687 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
CNOT9-207ENST00000489687 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
CNOT9-207ENST00000489687 CEBPAP49715 358 aaPredicted RBP9.28□□□□□ -0.92
CNOT9-207ENST00000489687 REREQ9P2R6 1566 aa9.28□□□□□ -0.92
CNOT9-207ENST00000489687 CCNB3Q8WWL7 1395 aa9.27□□□□□ -0.93
CNOT9-207ENST00000489687 ATP7AQ04656 1500 aa9.27□□□□□ -0.93
CNOT9-207ENST00000489687 C3P01024 1663 aa9.27□□□□□ -0.93
CNOT9-207ENST00000489687 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.93
CNOT9-207ENST00000489687 LOC105371045A0A1W2PR82 267 aa9.26□□□□□ -0.93
CNOT9-207ENST00000489687 HNRNPMP52272 730 aaKnown RBP eCLIP9.26□□□□□ -0.93
CNOT9-207ENST00000489687 ZNF644Q9H582 1327 aaPredicted RBP9.26□□□□□ -0.93
CNOT9-207ENST00000489687 PLXNC1O60486 1568 aa9.24□□□□□ -0.93
CNOT9-207ENST00000489687 NCOA2Q15596 1464 aa9.24□□□□□ -0.93
CNOT9-207ENST00000489687 CFDP1Q9UEE9 299 aaPredicted RBP9.24□□□□□ -0.93
CNOT9-207ENST00000489687 AGLP35573 1532 aa9.24□□□□□ -0.93
CNOT9-207ENST00000489687 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
CNOT9-207ENST00000489687 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
CNOT9-207ENST00000489687 CLTCQ00610 1675 aaKnown RBP9.23□□□□□ -0.93
CNOT9-207ENST00000489687 CAMSAP2Q08AD1 1489 aa9.22□□□□□ -0.93
CNOT9-207ENST00000489687 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
CNOT9-207ENST00000489687 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
CNOT9-207ENST00000489687 PLEKHH2Q8IVE3 1493 aa9.21□□□□□ -0.93
CNOT9-207ENST00000489687 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
CNOT9-207ENST00000489687 KIAA1107Q9UPP5 1409 aa9.21□□□□□ -0.94
CNOT9-207ENST00000489687 UHRF1BP1Q6BDS2 1440 aa9.2□□□□□ -0.94
CNOT9-207ENST00000489687 A2MP01023 1474 aa9.2□□□□□ -0.94
CNOT9-207ENST00000489687 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
CNOT9-207ENST00000489687 MROH2AA6NES4 1674 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms