RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 TMEM92Q6UXU6 159 aa11.83□□□□□ -0.52
RAB4A-204ENST00000489342 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
RAB4A-204ENST00000489342 SNPHO15079 494 aa11.8□□□□□ -0.52
RAB4A-204ENST00000489342 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
RAB4A-204ENST00000489342 PDE4AP27815 886 aa11.77□□□□□ -0.53
RAB4A-204ENST00000489342 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
RAB4A-204ENST00000489342 KIF3CO14782 793 aa11.74□□□□□ -0.53
RAB4A-204ENST00000489342 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
RAB4A-204ENST00000489342 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
RAB4A-204ENST00000489342 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
RAB4A-204ENST00000489342 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
RAB4A-204ENST00000489342 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
RAB4A-204ENST00000489342 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
RAB4A-204ENST00000489342 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
RAB4A-204ENST00000489342 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
RAB4A-204ENST00000489342 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
RAB4A-204ENST00000489342 FOXK1P85037 733 aa11.69□□□□□ -0.54
RAB4A-204ENST00000489342 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
RAB4A-204ENST00000489342 DSG2Q14126 1118 aa11.68□□□□□ -0.54
RAB4A-204ENST00000489342 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
RAB4A-204ENST00000489342 PLPP6Q8IY26 295 aa11.68□□□□□ -0.54
RAB4A-204ENST00000489342 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
RAB4A-204ENST00000489342 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
RAB4A-204ENST00000489342 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
RAB4A-204ENST00000489342 ST18O60284 1047 aa11.63□□□□□ -0.55
RAB4A-204ENST00000489342 MFSD10Q14728 455 aa11.61□□□□□ -0.55
RAB4A-204ENST00000489342 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
RAB4A-204ENST00000489342 TBC1D12O60347 775 aa11.57□□□□□ -0.56
RAB4A-204ENST00000489342 SLC34A2O95436 690 aa11.57□□□□□ -0.56
RAB4A-204ENST00000489342 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
RAB4A-204ENST00000489342 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
RAB4A-204ENST00000489342 PCDHGA4Q9Y5G9 962 aa11.55□□□□□ -0.56
RAB4A-204ENST00000489342 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
RAB4A-204ENST00000489342 EMP3P54852 163 aa11.53□□□□□ -0.56
RAB4A-204ENST00000489342 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
RAB4A-204ENST00000489342 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
RAB4A-204ENST00000489342 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
RAB4A-204ENST00000489342 GPR153Q6NV75 609 aa11.51□□□□□ -0.57
RAB4A-204ENST00000489342 E2F4Q16254 413 aa11.5□□□□□ -0.57
RAB4A-204ENST00000489342 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB4A-204ENST00000489342 NUDT7P0C024 238 aa11.49□□□□□ -0.57
RAB4A-204ENST00000489342 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
RAB4A-204ENST00000489342 POTEMA6NI47 508 aa11.48□□□□□ -0.57
RAB4A-204ENST00000489342 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
RAB4A-204ENST00000489342 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
RAB4A-204ENST00000489342 ERBB3P21860 1342 aa11.47□□□□□ -0.57
RAB4A-204ENST00000489342 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
RAB4A-204ENST00000489342 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
RAB4A-204ENST00000489342 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
RAB4A-204ENST00000489342 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
RAB4A-204ENST00000489342 DPYSL4O14531 572 aa11.42□□□□□ -0.58
RAB4A-204ENST00000489342 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
RAB4A-204ENST00000489342 EVI5O60447 810 aa11.4□□□□□ -0.58
RAB4A-204ENST00000489342 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
RAB4A-204ENST00000489342 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
RAB4A-204ENST00000489342 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
RAB4A-204ENST00000489342 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
RAB4A-204ENST00000489342 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
RAB4A-204ENST00000489342 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
RAB4A-204ENST00000489342 KCNV2Q8TDN2 545 aa11.35□□□□□ -0.59
RAB4A-204ENST00000489342 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
RAB4A-204ENST00000489342 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
RAB4A-204ENST00000489342 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
RAB4A-204ENST00000489342 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
RAB4A-204ENST00000489342 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
RAB4A-204ENST00000489342 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
RAB4A-204ENST00000489342 PDIA6Q15084 440 aa11.3□□□□□ -0.6
RAB4A-204ENST00000489342 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
RAB4A-204ENST00000489342 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
RAB4A-204ENST00000489342 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
RAB4A-204ENST00000489342 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
RAB4A-204ENST00000489342 ZNF687Q8N1G0 1237 aa11.27□□□□□ -0.61
RAB4A-204ENST00000489342 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
RAB4A-204ENST00000489342 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
RAB4A-204ENST00000489342 DDX12PQ92771 950 aa11.25□□□□□ -0.61
RAB4A-204ENST00000489342 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
RAB4A-204ENST00000489342 FOSBP53539 338 aa11.24□□□□□ -0.61
RAB4A-204ENST00000489342 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
RAB4A-204ENST00000489342 GRXCR2A6NFK2 248 aa11.23□□□□□ -0.61
RAB4A-204ENST00000489342 PHF14O94880 888 aa11.23□□□□□ -0.61
RAB4A-204ENST00000489342 ABCC9O60706 1549 aa11.22□□□□□ -0.61
RAB4A-204ENST00000489342 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
RAB4A-204ENST00000489342 PTGER2P43116 358 aa11.21□□□□□ -0.61
RAB4A-204ENST00000489342 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
RAB4A-204ENST00000489342 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
RAB4A-204ENST00000489342 PBX2P40425 430 aa11.2□□□□□ -0.62
RAB4A-204ENST00000489342 NBR1Q14596 966 aa11.2□□□□□ -0.62
RAB4A-204ENST00000489342 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
RAB4A-204ENST00000489342 EPAS1Q99814 870 aa11.2□□□□□ -0.62
RAB4A-204ENST00000489342 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
RAB4A-204ENST00000489342 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
RAB4A-204ENST00000489342 PTPREP23469 700 aa11.17□□□□□ -0.62
RAB4A-204ENST00000489342 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
RAB4A-204ENST00000489342 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
RAB4A-204ENST00000489342 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
RAB4A-204ENST00000489342 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
RAB4A-204ENST00000489342 SEMA3EO15041 775 aa11.14□□□□□ -0.63
RAB4A-204ENST00000489342 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
RAB4A-204ENST00000489342 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
RAB4A-204ENST00000489342 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms